RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 TEX48A0A1B0GUV7 120 aa16.85■□□□□ 0.29
RRP9-201ENST00000232888 A0A087WX48 190 aa16.85■□□□□ 0.29
RRP9-201ENST00000232888 UBE2D3P61077 147 aa16.85■□□□□ 0.29
RRP9-201ENST00000232888 UBE2D2P62837 147 aa16.85■□□□□ 0.29
RRP9-201ENST00000232888 NPSP0C0P6 89 aa16.84■□□□□ 0.29
RRP9-201ENST00000232888 SPART-AS1P0CW21 52 aa16.84■□□□□ 0.29
RRP9-201ENST00000232888 PMCHL2Q9BQD1 86 aa16.84■□□□□ 0.29
RRP9-201ENST00000232888 RPL39P62891 51 aaKnown RBP16.83■□□□□ 0.28
RRP9-201ENST00000232888 PYGO1Q9Y3Y4 419 aa16.83■□□□□ 0.28
RRP9-201ENST00000232888 KPRPQ5T749 579 aaPredicted RBP16.82■□□□□ 0.28
RRP9-201ENST00000232888 BAALCQ8WXS3 180 aa16.82■□□□□ 0.28
RRP9-201ENST00000232888 HHLA3Q9XRX5 114 aa16.82■□□□□ 0.28
RRP9-201ENST00000232888 DEFB104AQ8WTQ1 72 aa16.81■□□□□ 0.28
RRP9-201ENST00000232888 GAGE12JA6NER3 117 aa16.81■□□□□ 0.28
RRP9-201ENST00000232888 DPM2O94777 84 aa16.81■□□□□ 0.28
RRP9-201ENST00000232888 DAD1P61803 113 aa16.81■□□□□ 0.28
RRP9-201ENST00000232888 GAGE1Q13065 139 aa16.81■□□□□ 0.28
RRP9-201ENST00000232888 GAGE4Q13068 117 aa16.81■□□□□ 0.28
RRP9-201ENST00000232888 GAGE5Q13069 117 aa16.81■□□□□ 0.28
RRP9-201ENST00000232888 GAGE13Q4V321 117 aa16.81■□□□□ 0.28
RRP9-201ENST00000232888 PAPPA-AS1Q5QFB9 102 aa16.81■□□□□ 0.28
RRP9-201ENST00000232888 PHLDA1Q8WV24 401 aaPredicted RBP16.81■□□□□ 0.28
RRP9-201ENST00000232888 CHCHD7Q9BUK0 85 aa16.81■□□□□ 0.28
RRP9-201ENST00000232888 PLNP26678 52 aa16.8■□□□□ 0.28
RRP9-201ENST00000232888 DDTP30046 118 aa16.8■□□□□ 0.28
RRP9-201ENST00000232888 GTSF1LQ9H1H1 148 aa16.8■□□□□ 0.28
RRP9-201ENST00000232888 PRO0255Q9UI72 69 aa16.8■□□□□ 0.28
RRP9-201ENST00000232888 F8VRH5 84 aa16.79■□□□□ 0.28
RRP9-201ENST00000232888 IGKCP01834 107 aa16.79■□□□□ 0.28
RRP9-201ENST00000232888 CRYBA4P53673 196 aa16.79■□□□□ 0.28
RRP9-201ENST00000232888 MAJINQ3KP22 176 aa16.79■□□□□ 0.28
RRP9-201ENST00000232888 IGHV3-38A0A0C4DH36 116 aa16.78■□□□□ 0.28
RRP9-201ENST00000232888 DEFB4AO15263 64 aa16.78■□□□□ 0.28
RRP9-201ENST00000232888 PMVKQ15126 192 aa16.78■□□□□ 0.28
RRP9-201ENST00000232888 MIEN1Q9BRT3 115 aa16.78■□□□□ 0.28
RRP9-201ENST00000232888 SPANXA1Q9NS26 97 aa16.78■□□□□ 0.28
RRP9-201ENST00000232888 hDV102S1A0JD36 115 aa16.77■□□□□ 0.28
RRP9-201ENST00000232888 MRPL35Q9NZE8 188 aaKnown RBP16.77■□□□□ 0.28
RRP9-201ENST00000232888 CHTOPQ9Y3Y2 248 aaKnown RBP16.77■□□□□ 0.28
RRP9-201ENST00000232888 PRSS29PA6NIE9 313 aa16.77■□□□□ 0.27
RRP9-201ENST00000232888 LINC00694P0DN24 101 aa16.77■□□□□ 0.27
RRP9-201ENST00000232888 TMEM97Q5BJF2 176 aa16.77■□□□□ 0.27
RRP9-201ENST00000232888 ATP5G1P05496 136 aa16.76■□□□□ 0.27
RRP9-201ENST00000232888 IGLC3P0DOY3 106 aa16.76■□□□□ 0.27
RRP9-201ENST00000232888 SMAGPQ0VAQ4 97 aa16.76■□□□□ 0.27
RRP9-201ENST00000232888 TIMM21Q9BVV7 248 aa16.76■□□□□ 0.27
RRP9-201ENST00000232888 C11orf68Q9H3H3 251 aaKnown RBP16.75■□□□□ 0.27
RRP9-201ENST00000232888 CST9LQ9H4G1 147 aa16.75■□□□□ 0.27
RRP9-201ENST00000232888 UQCR10Q9UDW1 63 aa16.75■□□□□ 0.27
RRP9-201ENST00000232888 CELA1Q9UNI1 258 aa16.74■□□□□ 0.27
RRP9-201ENST00000232888 PKD1L1Q8TDX9 2849 aa16.73■□□□□ 0.27
RRP9-201ENST00000232888 LOC100131303A0A0U1RQF7 123 aa16.72■□□□□ 0.27
RRP9-201ENST00000232888 UBE2D4Q9Y2X8 147 aa16.72■□□□□ 0.27
RRP9-201ENST00000232888 CMYA5Q8N3K9 4069 aa16.72■□□□□ 0.27
RRP9-201ENST00000232888 IGLV4-3A0A075B6K6 122 aa16.72■□□□□ 0.27
RRP9-201ENST00000232888 LINC00587B1AMM8 73 aa16.72■□□□□ 0.27
RRP9-201ENST00000232888 VCX2Q9H322 139 aa16.72■□□□□ 0.27
RRP9-201ENST00000232888 ANK2Q01484 3957 aa16.71■□□□□ 0.27
RRP9-201ENST00000232888 H7C423 109 aa16.71■□□□□ 0.27
RRP9-201ENST00000232888 PAX4O43316 350 aa16.71■□□□□ 0.27
RRP9-201ENST00000232888 NTM-AS1Q6ZSK4 140 aa16.71■□□□□ 0.27
RRP9-201ENST00000232888 GYPEP15421 78 aa16.7■□□□□ 0.26
RRP9-201ENST00000232888 MRPS36P82909 103 aaKnown RBP16.7■□□□□ 0.26
RRP9-201ENST00000232888 RETNQ9HD89 108 aa16.7■□□□□ 0.26
RRP9-201ENST00000232888 CSDC2Q9Y534 153 aaKnown RBP16.7■□□□□ 0.26
RRP9-201ENST00000232888 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.69■□□□□ 0.26
RRP9-201ENST00000232888 IGKV2-29A2NJV5 120 aaPredicted RBP16.69■□□□□ 0.26
RRP9-201ENST00000232888 MRPL52Q86TS9 123 aaKnown RBP16.69■□□□□ 0.26
RRP9-201ENST00000232888 SBSPONQ8IVN8 264 aa16.69■□□□□ 0.26
RRP9-201ENST00000232888 STPG4Q8N801 248 aa16.69■□□□□ 0.26
RRP9-201ENST00000232888 AMELXQ99217 191 aa16.69■□□□□ 0.26
RRP9-201ENST00000232888 TRBV25-1A0A075B6N4 114 aa16.68■□□□□ 0.26
RRP9-201ENST00000232888 K7EIL1 84 aa16.68■□□□□ 0.26
RRP9-201ENST00000232888 TMEM243Q9BU79 118 aa16.68■□□□□ 0.26
RRP9-201ENST00000232888 NBEAL2Q6ZNJ1 2754 aa16.68■□□□□ 0.26
RRP9-201ENST00000232888 ATP6V0E2Q8NHE4 81 aa16.68■□□□□ 0.26
RRP9-201ENST00000232888 C14orf144Q96I85 54 aa16.68■□□□□ 0.26
RRP9-201ENST00000232888 ANKRD39Q53RE8 183 aa16.67■□□□□ 0.26
RRP9-201ENST00000232888 ZC2HC1BQ5TFG8 222 aa16.67■□□□□ 0.26
RRP9-201ENST00000232888 SPATA25Q9BR10 227 aa16.67■□□□□ 0.26
RRP9-201ENST00000232888 OPRPNQ99935 248 aaPredicted RBP16.66■□□□□ 0.26
RRP9-201ENST00000232888 IGLV4-69A0A075B6H9 119 aa16.65■□□□□ 0.26
RRP9-201ENST00000232888 TRBV6-8A0A0A6YYG3 113 aa16.65■□□□□ 0.26
RRP9-201ENST00000232888 COX8AP10176 69 aa16.65■□□□□ 0.26
RRP9-201ENST00000232888 DEFA6Q01524 100 aa16.65■□□□□ 0.26
RRP9-201ENST00000232888 DGAT2L7PQ6IED9 249 aa16.65■□□□□ 0.26
RRP9-201ENST00000232888 SLC25A34Q6PIV7 304 aa16.65■□□□□ 0.26
RRP9-201ENST00000232888 FAM104AQ969W3 186 aa16.65■□□□□ 0.26
RRP9-201ENST00000232888 TRAV26-1A0A087WT03 109 aa16.64■□□□□ 0.25
RRP9-201ENST00000232888 F5H768 121 aa16.64■□□□□ 0.25
RRP9-201ENST00000232888 C12orf74Q32Q52 190 aa16.64■□□□□ 0.25
RRP9-201ENST00000232888 SH2D6Q7Z4S9 175 aa16.64■□□□□ 0.25
RRP9-201ENST00000232888 NFE4Q86UQ8 179 aa16.64■□□□□ 0.25
RRP9-201ENST00000232888 VSIG2Q96IQ7 327 aa16.64■□□□□ 0.25
RRP9-201ENST00000232888 DNAH3Q8TD57 4116 aa16.64■□□□□ 0.25
RRP9-201ENST00000232888 UBE2L6O14933 153 aa16.64■□□□□ 0.25
RRP9-201ENST00000232888 FGF6P10767 208 aa16.64■□□□□ 0.25
RRP9-201ENST00000232888 TM2D3Q9BRN9 247 aa16.64■□□□□ 0.25
RRP9-201ENST00000232888 CEMP1Q6PRD7 247 aaPredicted RBP16.63■□□□□ 0.25
RRP9-201ENST00000232888 C2orf88Q9BSF0 95 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms