RNA–Protein interactions for RNA: ENST00000229328.9

PRKAB1-201, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-201ENST00000229328 CMC4P56277 68 aaPredicted RBP10.4□□□□□ -0.74
PRKAB1-201ENST00000229328 IGLV4-69A0A075B6H9 119 aa10.4□□□□□ -0.74
PRKAB1-201ENST00000229328 TRAV8-6A0A0B4J262 113 aa10.4□□□□□ -0.74
PRKAB1-201ENST00000229328 C20orf203Q8NBC4 194 aa10.4□□□□□ -0.74
PRKAB1-201ENST00000229328 TMEM141Q96I45 108 aa10.4□□□□□ -0.74
PRKAB1-201ENST00000229328 FAM110AQ9BQ89 295 aa10.4□□□□□ -0.74
PRKAB1-201ENST00000229328 PMVKQ15126 192 aa10.39□□□□□ -0.75
PRKAB1-201ENST00000229328 TRGV1A0A0A0MS02 117 aa10.39□□□□□ -0.75
PRKAB1-201ENST00000229328 LINC01549A6NIU2 74 aa10.39□□□□□ -0.75
PRKAB1-201ENST00000229328 TNFRSF18Q9Y5U5 241 aa10.39□□□□□ -0.75
PRKAB1-201ENST00000229328 TRBV25-1A0A075B6N4 114 aa10.38□□□□□ -0.75
PRKAB1-201ENST00000229328 C11orf86A6NJI1 115 aa10.38□□□□□ -0.75
PRKAB1-201ENST00000229328 IGHV3-53P01767 116 aa10.38□□□□□ -0.75
PRKAB1-201ENST00000229328 Q6ZTI0 123 aa10.38□□□□□ -0.75
PRKAB1-201ENST00000229328 RHODO00212 210 aa10.37□□□□□ -0.75
PRKAB1-201ENST00000229328 TMEM263Q8WUH6 116 aaKnown RBP10.37□□□□□ -0.75
PRKAB1-201ENST00000229328 HSD52Q0P140 79 aa10.37□□□□□ -0.75
PRKAB1-201ENST00000229328 CSNK1G2-AS1Q8NCQ2 148 aa10.37□□□□□ -0.75
PRKAB1-201ENST00000229328 ZNF479Q96JC4 524 aa10.37□□□□□ -0.75
PRKAB1-201ENST00000229328 IGHV3-38A0A0C4DH36 116 aa10.36□□□□□ -0.75
PRKAB1-201ENST00000229328 GAGE10A6NGK3 116 aa10.36□□□□□ -0.75
PRKAB1-201ENST00000229328 ZNRF2Q8NHG8 242 aa10.36□□□□□ -0.75
PRKAB1-201ENST00000229328 NOP10Q9NPE3 64 aaKnown RBP10.36□□□□□ -0.75
PRKAB1-201ENST00000229328 PLAC8L1A1L4L8 177 aa10.36□□□□□ -0.75
PRKAB1-201ENST00000229328 PHLDA1Q8WV24 401 aaPredicted RBP10.36□□□□□ -0.75
PRKAB1-201ENST00000229328 CHAC1Q9BUX1 264 aa10.36□□□□□ -0.75
PRKAB1-201ENST00000229328 CRLF1O75462 422 aa10.35□□□□□ -0.75
PRKAB1-201ENST00000229328 HIGD1BQ9P298 99 aa10.35□□□□□ -0.75
PRKAB1-201ENST00000229328 IGLV4-3A0A075B6K6 122 aa10.35□□□□□ -0.75
PRKAB1-201ENST00000229328 CEMP1Q6PRD7 247 aaPredicted RBP10.35□□□□□ -0.75
PRKAB1-201ENST00000229328 FAM104AQ969W3 186 aa10.35□□□□□ -0.75
PRKAB1-201ENST00000229328 PRADC1Q9BSG0 188 aa10.35□□□□□ -0.75
PRKAB1-201ENST00000229328 E9PLD3 99 aa10.34□□□□□ -0.75
PRKAB1-201ENST00000229328 OR11H2Q8NH07 326 aa10.34□□□□□ -0.75
PRKAB1-201ENST00000229328 SEC11AP67812 179 aa10.34□□□□□ -0.75
PRKAB1-201ENST00000229328 GTF2H5Q6ZYL4 71 aa10.34□□□□□ -0.75
PRKAB1-201ENST00000229328 CHCHD7Q9BUK0 85 aa10.34□□□□□ -0.75
PRKAB1-201ENST00000229328 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.33□□□□□ -0.76
PRKAB1-201ENST00000229328 ATRQ13535 2644 aa10.33□□□□□ -0.76
PRKAB1-201ENST00000229328 A0A1B0GV72 72 aa10.33□□□□□ -0.76
PRKAB1-201ENST00000229328 DNAJC30Q96LL9 226 aa10.33□□□□□ -0.76
PRKAB1-201ENST00000229328 TRRAPQ9Y4A5 3859 aa10.32□□□□□ -0.76
PRKAB1-201ENST00000229328 C1QTNF4Q9BXJ3 329 aa10.32□□□□□ -0.76
PRKAB1-201ENST00000229328 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.32□□□□□ -0.76
PRKAB1-201ENST00000229328 MYMXA0A1B0GTQ4 84 aa10.32□□□□□ -0.76
PRKAB1-201ENST00000229328 IGKV2-29A2NJV5 120 aaPredicted RBP10.32□□□□□ -0.76
PRKAB1-201ENST00000229328 SCGB1A1P11684 91 aa10.32□□□□□ -0.76
PRKAB1-201ENST00000229328 DAZ2Q13117 558 aaKnown RBP10.32□□□□□ -0.76
PRKAB1-201ENST00000229328 C16orf74Q96GX8 76 aa10.32□□□□□ -0.76
PRKAB1-201ENST00000229328 F8P00451 2351 aa10.32□□□□□ -0.76
PRKAB1-201ENST00000229328 GCSHP23434 173 aa10.31□□□□□ -0.76
PRKAB1-201ENST00000229328 FXYD2P54710 66 aa10.31□□□□□ -0.76
PRKAB1-201ENST00000229328 RNASE13Q5GAN3 156 aaKnown RBP10.31□□□□□ -0.76
PRKAB1-201ENST00000229328 PAPPA-AS1Q5QFB9 102 aa10.31□□□□□ -0.76
PRKAB1-201ENST00000229328 TMEM170BQ5T4T1 132 aa10.31□□□□□ -0.76
PRKAB1-201ENST00000229328 VCX2Q9H322 139 aa10.31□□□□□ -0.76
PRKAB1-201ENST00000229328 PYGO1Q9Y3Y4 419 aa10.31□□□□□ -0.76
PRKAB1-201ENST00000229328 TEP1Q99973 2627 aaKnown RBP10.3□□□□□ -0.76
PRKAB1-201ENST00000229328 TRAV4A0A0B4J268 109 aa10.3□□□□□ -0.76
PRKAB1-201ENST00000229328 GAGE7O76087 117 aa10.3□□□□□ -0.76
PRKAB1-201ENST00000229328 GAGE12FP0CL80 117 aa10.3□□□□□ -0.76
PRKAB1-201ENST00000229328 GAGE12GP0CL81 117 aa10.3□□□□□ -0.76
PRKAB1-201ENST00000229328 GAGE12IP0CL82 117 aa10.3□□□□□ -0.76
PRKAB1-201ENST00000229328 RRN3P1Q2M238 152 aa10.3□□□□□ -0.76
PRKAB1-201ENST00000229328 NFE4Q86UQ8 179 aa10.3□□□□□ -0.76
PRKAB1-201ENST00000229328 A0A0J9YXV3 536 aa10.29□□□□□ -0.76
PRKAB1-201ENST00000229328 A6NDN8 102 aa10.29□□□□□ -0.76
PRKAB1-201ENST00000229328 SLC25A29Q8N8R3 303 aa10.29□□□□□ -0.76
PRKAB1-201ENST00000229328 UBE2D4Q9Y2X8 147 aa10.29□□□□□ -0.76
PRKAB1-201ENST00000229328 K7EP34 96 aa10.29□□□□□ -0.76
PRKAB1-201ENST00000229328 K7EQD1 137 aa10.29□□□□□ -0.76
PRKAB1-201ENST00000229328 TSPEAR-AS2P59090 65 aa10.29□□□□□ -0.76
PRKAB1-201ENST00000229328 CITED1Q99966 193 aa10.29□□□□□ -0.76
PRKAB1-201ENST00000229328 TRBV7-3A0A075B6L6 115 aa10.28□□□□□ -0.76
PRKAB1-201ENST00000229328 ZNF815PA8K554 130 aa10.28□□□□□ -0.76
PRKAB1-201ENST00000229328 PLEKHB2Q96CS7 222 aa10.28□□□□□ -0.76
PRKAB1-201ENST00000229328 AMELXQ99217 191 aa10.28□□□□□ -0.76
PRKAB1-201ENST00000229328 C9orf66Q5T8R8 295 aa10.28□□□□□ -0.76
PRKAB1-201ENST00000229328 CEND1Q8N111 149 aa10.28□□□□□ -0.76
PRKAB1-201ENST00000229328 OVOL2Q9BRP0 275 aa10.28□□□□□ -0.76
PRKAB1-201ENST00000229328 GTSF1LQ9H1H1 148 aa10.28□□□□□ -0.76
PRKAB1-201ENST00000229328 TRGV2A0A075B6R0 118 aa10.27□□□□□ -0.76
PRKAB1-201ENST00000229328 HERVK_113P61574 105 aa10.27□□□□□ -0.76
PRKAB1-201ENST00000229328 SMAGPQ0VAQ4 97 aa10.27□□□□□ -0.76
PRKAB1-201ENST00000229328 RAB37Q96AX2 223 aa10.27□□□□□ -0.76
PRKAB1-201ENST00000229328 NAA38Q9BRA0 125 aaKnown RBP10.27□□□□□ -0.76
PRKAB1-201ENST00000229328 NBEAL2Q6ZNJ1 2754 aa10.27□□□□□ -0.77
PRKAB1-201ENST00000229328 C9orf118A6NHY6 69 aa10.27□□□□□ -0.77
PRKAB1-201ENST00000229328 H3BRM9 83 aa10.27□□□□□ -0.77
PRKAB1-201ENST00000229328 ZNF22P17026 224 aaPredicted RBP10.27□□□□□ -0.77
PRKAB1-201ENST00000229328 INSL3P51460 131 aa10.27□□□□□ -0.77
PRKAB1-201ENST00000229328 TM2D2Q9BX73 214 aa10.27□□□□□ -0.77
PRKAB1-201ENST00000229328 Q6ZUT4 128 aa10.26□□□□□ -0.77
PRKAB1-201ENST00000229328 GAGE12JA6NER3 117 aa10.26□□□□□ -0.77
PRKAB1-201ENST00000229328 GAGE4Q13068 117 aa10.26□□□□□ -0.77
PRKAB1-201ENST00000229328 GAGE5Q13069 117 aa10.26□□□□□ -0.77
PRKAB1-201ENST00000229328 GAGE13Q4V321 117 aa10.26□□□□□ -0.77
PRKAB1-201ENST00000229328 HIST1H4GQ99525 98 aa10.26□□□□□ -0.77
PRKAB1-201ENST00000229328 SIGMAR1Q99720 223 aa10.26□□□□□ -0.77
PRKAB1-201ENST00000229328 TMEM223A0PJW6 202 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms