RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 C11orf44Q8N8P7 122 aa10.87□□□□□ -0.67
PRDM4-201ENST00000228437 ODF3BA8MYP8 253 aa10.86□□□□□ -0.67
PRDM4-201ENST00000228437 POLR2KP53803 58 aaKnown RBP10.86□□□□□ -0.67
PRDM4-201ENST00000228437 RHOHQ15669 191 aa10.86□□□□□ -0.67
PRDM4-201ENST00000228437 PSMG3-AS1Q96PY0 264 aa10.86□□□□□ -0.67
PRDM4-201ENST00000228437 IGLV4-3A0A075B6K6 122 aa10.86□□□□□ -0.67
PRDM4-201ENST00000228437 PFN2P35080 140 aa10.85□□□□□ -0.67
PRDM4-201ENST00000228437 ADAMTSL4-AS1Q5T5F5 129 aa10.85□□□□□ -0.67
PRDM4-201ENST00000228437 LRRK2Q5S007 2527 aa10.85□□□□□ -0.67
PRDM4-201ENST00000228437 PPDPFQ9H3Y8 114 aa10.85□□□□□ -0.67
PRDM4-201ENST00000228437 IGHV4-4A0A075B6R2 117 aa10.84□□□□□ -0.67
PRDM4-201ENST00000228437 CRPP02741 224 aa10.84□□□□□ -0.67
PRDM4-201ENST00000228437 NHLRC4P0CG21 123 aaPredicted RBP10.84□□□□□ -0.67
PRDM4-201ENST00000228437 C5orf56Q8N8D9 126 aa10.84□□□□□ -0.67
PRDM4-201ENST00000228437 H3BT86 120 aa10.84□□□□□ -0.67
PRDM4-201ENST00000228437 PAX4O43316 350 aa10.84□□□□□ -0.67
PRDM4-201ENST00000228437 ODF3Q96PU9 254 aa10.84□□□□□ -0.67
PRDM4-201ENST00000228437 LOC107984640A0A0U1RRK4 108 aa10.83□□□□□ -0.68
PRDM4-201ENST00000228437 Q8NA96 180 aa10.83□□□□□ -0.68
PRDM4-201ENST00000228437 CDKN2A-AS1Q9UH64 79 aa10.83□□□□□ -0.68
PRDM4-201ENST00000228437 LRBAP50851 2863 aa10.83□□□□□ -0.68
PRDM4-201ENST00000228437 TRGV1A0A0A0MS02 117 aa10.83□□□□□ -0.68
PRDM4-201ENST00000228437 M0QXV9 152 aa10.83□□□□□ -0.68
PRDM4-201ENST00000228437 ATP5J2P56134 94 aa10.83□□□□□ -0.68
PRDM4-201ENST00000228437 LINC00694P0DN24 101 aa10.83□□□□□ -0.68
PRDM4-201ENST00000228437 IGHV1-58A0A0C4DH39 117 aa10.82□□□□□ -0.68
PRDM4-201ENST00000228437 CFHR3Q02985 330 aa10.82□□□□□ -0.68
PRDM4-201ENST00000228437 ZZEF1O43149 2961 aa10.82□□□□□ -0.68
PRDM4-201ENST00000228437 M0QY20 66 aa10.82□□□□□ -0.68
PRDM4-201ENST00000228437 DAZ2Q13117 558 aaKnown RBP10.82□□□□□ -0.68
PRDM4-201ENST00000228437 DAZ4Q86SG3 579 aaKnown RBP10.82□□□□□ -0.68
PRDM4-201ENST00000228437 ZNF575Q86XF7 245 aa10.82□□□□□ -0.68
PRDM4-201ENST00000228437 DAZ3Q9NR90 486 aaKnown RBP10.82□□□□□ -0.68
PRDM4-201ENST00000228437 MAPK1IP1LQ8NDC0 245 aa10.82□□□□□ -0.68
PRDM4-201ENST00000228437 XCL2Q9UBD3 114 aa10.82□□□□□ -0.68
PRDM4-201ENST00000228437 LINC01546A6NGU7 62 aa10.82□□□□□ -0.68
PRDM4-201ENST00000228437 SDIM1Q6ZPB5 146 aa10.82□□□□□ -0.68
PRDM4-201ENST00000228437 USMG5Q96IX5 58 aa10.82□□□□□ -0.68
PRDM4-201ENST00000228437 TRBV30A0A0K0K1B3 111 aa10.81□□□□□ -0.68
PRDM4-201ENST00000228437 IGHV4-38-2P0DP08 117 aa10.81□□□□□ -0.68
PRDM4-201ENST00000228437 CENPEQ02224 2701 aa10.81□□□□□ -0.68
PRDM4-201ENST00000228437 PIP4P1Q86T03 277 aa10.81□□□□□ -0.68
PRDM4-201ENST00000228437 POM121L12Q8N7R1 296 aa10.81□□□□□ -0.68
PRDM4-201ENST00000228437 A0A1B0GX51 115 aa10.8□□□□□ -0.68
PRDM4-201ENST00000228437 hADV29S1A0JD25 119 aa10.8□□□□□ -0.68
PRDM4-201ENST00000228437 HERVK_113P63121 156 aa10.8□□□□□ -0.68
PRDM4-201ENST00000228437 MIAQ16674 131 aa10.8□□□□□ -0.68
PRDM4-201ENST00000228437 TNRC18O15417 2968 aaPredicted RBP10.8□□□□□ -0.68
PRDM4-201ENST00000228437 CDSNQ15517 529 aa10.8□□□□□ -0.68
PRDM4-201ENST00000228437 NSUN5P1Q3KNT7 163 aa10.8□□□□□ -0.68
PRDM4-201ENST00000228437 TRBV27A0A0K0K1C4 114 aa10.79□□□□□ -0.68
PRDM4-201ENST00000228437 ATP5G1P05496 136 aa10.79□□□□□ -0.68
PRDM4-201ENST00000228437 HIST2H2BDQ6DRA6 164 aa10.79□□□□□ -0.68
PRDM4-201ENST00000228437 DEFB136Q30KP8 78 aa10.79□□□□□ -0.68
PRDM4-201ENST00000228437 Q8N6K4 173 aa10.79□□□□□ -0.68
PRDM4-201ENST00000228437 SIRPDQ9H106 197 aa10.79□□□□□ -0.68
PRDM4-201ENST00000228437 SMG1Q96Q15 3661 aaKnown RBP10.79□□□□□ -0.68
PRDM4-201ENST00000228437 PIK3CD-AS1Q5SR53 167 aa10.79□□□□□ -0.68
PRDM4-201ENST00000228437 C10orf99Q6UWK7 81 aa10.79□□□□□ -0.68
PRDM4-201ENST00000228437 PKD1L2Q7Z442 2459 aa10.79□□□□□ -0.68
PRDM4-201ENST00000228437 CSMD1Q96PZ7 3565 aa10.79□□□□□ -0.68
PRDM4-201ENST00000228437 COPS9Q8WXC6 57 aa10.78□□□□□ -0.68
PRDM4-201ENST00000228437 IGHV1-69P01742 117 aa10.78□□□□□ -0.68
PRDM4-201ENST00000228437 C14orf132Q9NPU4 83 aa10.78□□□□□ -0.68
PRDM4-201ENST00000228437 NAV2Q8IVL1 2488 aa10.78□□□□□ -0.68
PRDM4-201ENST00000228437 MUC4Q99102 2169 aa10.78□□□□□ -0.68
PRDM4-201ENST00000228437 A0A1W2PRX2 142 aa10.78□□□□□ -0.68
PRDM4-201ENST00000228437 TRACP01848 142 aa10.78□□□□□ -0.68
PRDM4-201ENST00000228437 TMEM126AQ9H061 195 aa10.78□□□□□ -0.68
PRDM4-201ENST00000228437 IGHV4OR15-8A0A075B7B6 117 aa10.77□□□□□ -0.68
PRDM4-201ENST00000228437 A0A087WW49 117 aa10.77□□□□□ -0.68
PRDM4-201ENST00000228437 DMXL1Q9Y485 3027 aa10.77□□□□□ -0.69
PRDM4-201ENST00000228437 PRB1P04280 392 aa10.77□□□□□ -0.69
PRDM4-201ENST00000228437 TMEM61Q8N0U2 210 aa10.76□□□□□ -0.69
PRDM4-201ENST00000228437 TRGV2A0A075B6R0 118 aa10.76□□□□□ -0.69
PRDM4-201ENST00000228437 LST1O00453 97 aa10.76□□□□□ -0.69
PRDM4-201ENST00000228437 LINC00467Q9BRT7 94 aa10.76□□□□□ -0.69
PRDM4-201ENST00000228437 INAFM2P0DMQ5 153 aa10.76□□□□□ -0.69
PRDM4-201ENST00000228437 FAM110AQ9BQ89 295 aa10.76□□□□□ -0.69
PRDM4-201ENST00000228437 PIMREGQ9BSJ6 248 aa10.76□□□□□ -0.69
PRDM4-201ENST00000228437 PEMTQ9UBM1 199 aa10.76□□□□□ -0.69
PRDM4-201ENST00000228437 NDUFA7O95182 113 aa10.76□□□□□ -0.69
PRDM4-201ENST00000228437 MED14OSP0DP75 135 aa10.76□□□□□ -0.69
PRDM4-201ENST00000228437 APRG1Q8IVJ8 170 aa10.76□□□□□ -0.69
PRDM4-201ENST00000228437 VSIG2Q96IQ7 327 aa10.76□□□□□ -0.69
PRDM4-201ENST00000228437 ZNF415Q09FC8 603 aa10.75□□□□□ -0.69
PRDM4-201ENST00000228437 EBI3Q14213 229 aa10.75□□□□□ -0.69
PRDM4-201ENST00000228437 Q9UF83 564 aa10.74□□□□□ -0.69
PRDM4-201ENST00000228437 LINC00643Q86TS7 51 aa10.74□□□□□ -0.69
PRDM4-201ENST00000228437 LAMA5O15230 3695 aa10.74□□□□□ -0.69
PRDM4-201ENST00000228437 SLPIP03973 132 aa10.73□□□□□ -0.69
PRDM4-201ENST00000228437 C3orf22Q8N5N4 141 aa10.73□□□□□ -0.69
PRDM4-201ENST00000228437 SPANXA1Q9NS26 97 aa10.73□□□□□ -0.69
PRDM4-201ENST00000228437 LINC00315P59091 139 aa10.73□□□□□ -0.69
PRDM4-201ENST00000228437 RPL36AP83881 106 aaKnown RBP10.73□□□□□ -0.69
PRDM4-201ENST00000228437 RPL36ALQ969Q0 106 aaKnown RBP10.73□□□□□ -0.69
PRDM4-201ENST00000228437 A0A0J9YX75 114 aa10.72□□□□□ -0.69
PRDM4-201ENST00000228437 SBSPONQ8IVN8 264 aa10.72□□□□□ -0.69
PRDM4-201ENST00000228437 LINC00308Q8TCZ7 52 aa10.72□□□□□ -0.69
PRDM4-201ENST00000228437 VPREB3Q9UKI3 123 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms