RNA–Protein interactions for RNA: ENST00000227524.8

PRPF19-201, Transcript of pre-mRNA processing factor 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF19, Length 2,157 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-201ENST00000227524 ITPR3Q14573 2671 aa12.87□□□□□ -0.35
PRPF19-201ENST00000227524 IGHV4-31P0DP07 118 aa12.87□□□□□ -0.35
PRPF19-201ENST00000227524 PRRC2AP48634 2157 aaKnown RBP12.87□□□□□ -0.35
PRPF19-201ENST00000227524 C10orf99Q6UWK7 81 aa12.86□□□□□ -0.35
PRPF19-201ENST00000227524 ERG28Q9UKR5 140 aa12.86□□□□□ -0.35
PRPF19-201ENST00000227524 M0R2P5 195 aa12.86□□□□□ -0.35
PRPF19-201ENST00000227524 PDZD2O15018 2839 aa12.85□□□□□ -0.35
PRPF19-201ENST00000227524 SLC25A20O43772 301 aa12.85□□□□□ -0.35
PRPF19-201ENST00000227524 CCDC168Q8NDH2 2452 aa12.85□□□□□ -0.35
PRPF19-201ENST00000227524 ITPR2Q14571 2701 aa12.84□□□□□ -0.35
PRPF19-201ENST00000227524 C9JAW5 83 aa12.84□□□□□ -0.35
PRPF19-201ENST00000227524 J3QLI3 93 aa12.84□□□□□ -0.35
PRPF19-201ENST00000227524 M0QXV9 152 aa12.84□□□□□ -0.35
PRPF19-201ENST00000227524 A0A0J9YXY3 114 aa12.84□□□□□ -0.35
PRPF19-201ENST00000227524 H7C2G1 150 aa12.84□□□□□ -0.35
PRPF19-201ENST00000227524 TRGV11A0A075B6L2 103 aa12.83□□□□□ -0.36
PRPF19-201ENST00000227524 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.83□□□□□ -0.36
PRPF19-201ENST00000227524 FSHBP01225 129 aa12.83□□□□□ -0.36
PRPF19-201ENST00000227524 DEFB112Q30KQ8 113 aa12.83□□□□□ -0.36
PRPF19-201ENST00000227524 Q96MF0 132 aa12.83□□□□□ -0.36
PRPF19-201ENST00000227524 GEMIN7Q9H840 131 aaKnown RBP12.83□□□□□ -0.36
PRPF19-201ENST00000227524 TLN2Q9Y4G6 2542 aa12.83□□□□□ -0.36
PRPF19-201ENST00000227524 IGHV3-30-3P0DP02 117 aa12.81□□□□□ -0.36
PRPF19-201ENST00000227524 CD28P10747 220 aa12.81□□□□□ -0.36
PRPF19-201ENST00000227524 RNF152Q8N8N0 203 aa12.81□□□□□ -0.36
PRPF19-201ENST00000227524 FAM104AQ969W3 186 aa12.81□□□□□ -0.36
PRPF19-201ENST00000227524 PYGO1Q9Y3Y4 419 aa12.81□□□□□ -0.36
PRPF19-201ENST00000227524 IGHV4-59P01825 116 aa12.81□□□□□ -0.36
PRPF19-201ENST00000227524 SYNJ2BPP57105 145 aa12.81□□□□□ -0.36
PRPF19-201ENST00000227524 TIMM21Q9BVV7 248 aa12.81□□□□□ -0.36
PRPF19-201ENST00000227524 EDA2RQ9HAV5 297 aa12.81□□□□□ -0.36
PRPF19-201ENST00000227524 UNC79Q9P2D8 2635 aa12.8□□□□□ -0.36
PRPF19-201ENST00000227524 TMEM89A2RUT3 159 aa12.8□□□□□ -0.36
PRPF19-201ENST00000227524 Q1RN00 199 aa12.8□□□□□ -0.36
PRPF19-201ENST00000227524 SPXQ9BT56 116 aa12.8□□□□□ -0.36
PRPF19-201ENST00000227524 TMEM262E9PQX1 116 aa12.8□□□□□ -0.36
PRPF19-201ENST00000227524 ELANEP08246 267 aa12.8□□□□□ -0.36
PRPF19-201ENST00000227524 RBMY1A1P0DJD3 496 aaKnown RBP12.8□□□□□ -0.36
PRPF19-201ENST00000227524 RBMY1CP0DJD4 496 aa12.8□□□□□ -0.36
PRPF19-201ENST00000227524 MRPS36P82909 103 aaKnown RBP12.8□□□□□ -0.36
PRPF19-201ENST00000227524 RBMY1FQ15415 496 aaKnown RBP12.8□□□□□ -0.36
PRPF19-201ENST00000227524 LITAFQ99732 161 aa12.8□□□□□ -0.36
PRPF19-201ENST00000227524 AKAP9Q99996 3911 aa12.8□□□□□ -0.36
PRPF19-201ENST00000227524 FLNAP21333 2647 aaKnown RBP12.8□□□□□ -0.36
PRPF19-201ENST00000227524 IGHV3-73A0A0B4J1V6 119 aa12.79□□□□□ -0.36
PRPF19-201ENST00000227524 ADARB2-AS1A8MUL3 147 aa12.79□□□□□ -0.36
PRPF19-201ENST00000227524 ATXN8Q156A1 80 aa12.79□□□□□ -0.36
PRPF19-201ENST00000227524 PROK1P58294 105 aa12.78□□□□□ -0.36
PRPF19-201ENST00000227524 TRAV26-1A0A087WT03 109 aa12.77□□□□□ -0.36
PRPF19-201ENST00000227524 TRAV8-3A0A0A6YYJ7 113 aa12.77□□□□□ -0.36
PRPF19-201ENST00000227524 LINC01620Q4KN68 170 aa12.77□□□□□ -0.36
PRPF19-201ENST00000227524 CEMP1Q6PRD7 247 aaPredicted RBP12.77□□□□□ -0.36
PRPF19-201ENST00000227524 DUX5Q96PT3 197 aa12.77□□□□□ -0.36
PRPF19-201ENST00000227524 WFDC11Q8NEX6 87 aa12.77□□□□□ -0.37
PRPF19-201ENST00000227524 TRBV30A0A0K0K1B3 111 aa12.76□□□□□ -0.37
PRPF19-201ENST00000227524 IGHV1-58A0A0C4DH39 117 aa12.76□□□□□ -0.37
PRPF19-201ENST00000227524 TRIAP1O43715 76 aa12.76□□□□□ -0.37
PRPF19-201ENST00000227524 HTN1P15515 57 aa12.76□□□□□ -0.37
PRPF19-201ENST00000227524 RNASE13Q5GAN3 156 aaKnown RBP12.76□□□□□ -0.37
PRPF19-201ENST00000227524 NTN5Q8WTR8 489 aaPredicted RBP12.76□□□□□ -0.37
PRPF19-201ENST00000227524 SPANXDQ9BXN6 97 aa12.76□□□□□ -0.37
PRPF19-201ENST00000227524 SPANXCQ9NY87 97 aa12.76□□□□□ -0.37
PRPF19-201ENST00000227524 NACAE9PAV3 2078 aa12.75□□□□□ -0.37
PRPF19-201ENST00000227524 KNCNA6PVL3 124 aa12.75□□□□□ -0.37
PRPF19-201ENST00000227524 LINC01600Q96MT4 127 aa12.75□□□□□ -0.37
PRPF19-201ENST00000227524 TNFRSF18Q9Y5U5 241 aa12.75□□□□□ -0.37
PRPF19-201ENST00000227524 SONP18583 2426 aaKnown RBP12.74□□□□□ -0.37
PRPF19-201ENST00000227524 HOXD3P31249 432 aaPredicted RBP12.74□□□□□ -0.37
PRPF19-201ENST00000227524 NDUFA12Q9UI09 145 aa12.74□□□□□ -0.37
PRPF19-201ENST00000227524 ADAMTSL4-AS1Q5T5F5 129 aa12.74□□□□□ -0.37
PRPF19-201ENST00000227524 TINCRA0A1B0GVN0 87 aa12.73□□□□□ -0.37
PRPF19-201ENST00000227524 PRSS2P07478 247 aa12.73□□□□□ -0.37
PRPF19-201ENST00000227524 CLUHP3Q96NS8 147 aa12.73□□□□□ -0.37
PRPF19-201ENST00000227524 CITED1Q99966 193 aa12.73□□□□□ -0.37
PRPF19-201ENST00000227524 Q6YL49 198 aa12.73□□□□□ -0.37
PRPF19-201ENST00000227524 VSIG2Q96IQ7 327 aa12.73□□□□□ -0.37
PRPF19-201ENST00000227524 CHCHD7Q9BUK0 85 aa12.73□□□□□ -0.37
PRPF19-201ENST00000227524 TRBV10-2A0A0K0K1G8 114 aa12.72□□□□□ -0.37
PRPF19-201ENST00000227524 MIAQ16674 131 aa12.72□□□□□ -0.37
PRPF19-201ENST00000227524 ZFAND6Q6FIF0 208 aa12.72□□□□□ -0.37
PRPF19-201ENST00000227524 Q9UF83 564 aa12.72□□□□□ -0.37
PRPF19-201ENST00000227524 UBE2D4Q9Y2X8 147 aa12.72□□□□□ -0.37
PRPF19-201ENST00000227524 ICOSQ9Y6W8 199 aa12.72□□□□□ -0.37
PRPF19-201ENST00000227524 CUBNO60494 3623 aa12.72□□□□□ -0.37
PRPF19-201ENST00000227524 Q6ZSN1 163 aa12.71□□□□□ -0.37
PRPF19-201ENST00000227524 SPANXA1Q9NS26 97 aa12.71□□□□□ -0.37
PRPF19-201ENST00000227524 HECTD1Q9ULT8 2610 aa12.71□□□□□ -0.37
PRPF19-201ENST00000227524 A8MTW9 85 aa12.71□□□□□ -0.37
PRPF19-201ENST00000227524 PRM2P04554 102 aa12.71□□□□□ -0.37
PRPF19-201ENST00000227524 RPL13AP40429 203 aaKnown RBP12.71□□□□□ -0.37
PRPF19-201ENST00000227524 RNF183Q96D59 192 aa12.71□□□□□ -0.37
PRPF19-201ENST00000227524 DUX3Q96PT4 197 aa12.71□□□□□ -0.37
PRPF19-201ENST00000227524 VPREB3Q9UKI3 123 aa12.71□□□□□ -0.37
PRPF19-201ENST00000227524 SORL1Q92673 2214 aa12.71□□□□□ -0.38
PRPF19-201ENST00000227524 ACANP16112 2415 aa12.7□□□□□ -0.38
PRPF19-201ENST00000227524 RBMY1BA6NDE4 496 aaKnown RBP12.7□□□□□ -0.38
PRPF19-201ENST00000227524 RBMY1EA6NEQ0 496 aaKnown RBP12.7□□□□□ -0.38
PRPF19-201ENST00000227524 A8MZ25 164 aa12.7□□□□□ -0.38
PRPF19-201ENST00000227524 RBMY1DP0C7P1 496 aaKnown RBP12.7□□□□□ -0.38
PRPF19-201ENST00000227524 DEFB131AP59861 70 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms