RNA–Protein interactions for RNA: ENST00000226247.2

FOXN1-201, Transcript of forkhead box N1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN1, Length 3,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1-201ENST00000226247 IGHV3-33P01772 117 aa7.75□□□□□ -1.17
FOXN1-201ENST00000226247 RNASE3P12724 160 aaKnown RBP7.75□□□□□ -1.17
FOXN1-201ENST00000226247 SUMO4Q6EEV6 95 aa7.74□□□□□ -1.17
FOXN1-201ENST00000226247 TMEM101Q96IK0 257 aa7.74□□□□□ -1.17
FOXN1-201ENST00000226247 LINC00477Q96M19 166 aa7.74□□□□□ -1.17
FOXN1-201ENST00000226247 SMIM9A6NGZ8 99 aa7.74□□□□□ -1.17
FOXN1-201ENST00000226247 HTN1P15515 57 aa7.74□□□□□ -1.17
FOXN1-201ENST00000226247 UBE2E1P51965 193 aa7.74□□□□□ -1.17
FOXN1-201ENST00000226247 MAPK1IP1LQ8NDC0 245 aa7.74□□□□□ -1.17
FOXN1-201ENST00000226247 LINC01587Q99440 93 aa7.74□□□□□ -1.17
FOXN1-201ENST00000226247 ATRQ13535 2644 aa7.74□□□□□ -1.17
FOXN1-201ENST00000226247 TRAV13-1A0A0B4J241 112 aa7.74□□□□□ -1.17
FOXN1-201ENST00000226247 hADV29S1A0JD25 119 aa7.74□□□□□ -1.17
FOXN1-201ENST00000226247 IGIPA6NJ69 53 aa7.74□□□□□ -1.17
FOXN1-201ENST00000226247 A8MZ25 164 aa7.74□□□□□ -1.17
FOXN1-201ENST00000226247 LGALS9O00182 355 aa7.74□□□□□ -1.17
FOXN1-201ENST00000226247 C5orf47Q569G3 176 aa7.74□□□□□ -1.17
FOXN1-201ENST00000226247 ZNF625Q96I27 306 aaPredicted RBP7.74□□□□□ -1.17
FOXN1-201ENST00000226247 PIMREGQ9BSJ6 248 aa7.74□□□□□ -1.17
FOXN1-201ENST00000226247 C9orf139Q6ZV77 190 aa7.73□□□□□ -1.17
FOXN1-201ENST00000226247 WNK1Q9H4A3 2382 aa7.73□□□□□ -1.17
FOXN1-201ENST00000226247 VCYO14598 125 aa7.73□□□□□ -1.17
FOXN1-201ENST00000226247 LY6EQ16553 131 aa7.72□□□□□ -1.17
FOXN1-201ENST00000226247 GAGE2AQ6NT46 116 aa7.72□□□□□ -1.17
FOXN1-201ENST00000226247 TRAV12-2A0A075B6T6 113 aa7.72□□□□□ -1.17
FOXN1-201ENST00000226247 TRBV7-1A0A0A6YYK4 115 aa7.72□□□□□ -1.17
FOXN1-201ENST00000226247 A0A0J9YXV3 536 aa7.72□□□□□ -1.17
FOXN1-201ENST00000226247 EIF4EBP3O60516 100 aaPredicted RBP7.72□□□□□ -1.17
FOXN1-201ENST00000226247 PAPPA-AS1Q5QFB9 102 aa7.72□□□□□ -1.17
FOXN1-201ENST00000226247 NDUFA7O95182 113 aa7.72□□□□□ -1.17
FOXN1-201ENST00000226247 ITLN2Q8WWU7 325 aaPredicted RBP7.72□□□□□ -1.17
FOXN1-201ENST00000226247 IGHV3-73A0A0B4J1V6 119 aa7.71□□□□□ -1.17
FOXN1-201ENST00000226247 COX6CP09669 75 aa7.71□□□□□ -1.17
FOXN1-201ENST00000226247 EDN2P20800 178 aa7.71□□□□□ -1.17
FOXN1-201ENST00000226247 EBI3Q14213 229 aa7.71□□□□□ -1.17
FOXN1-201ENST00000226247 MINOS1Q5TGZ0 78 aa7.71□□□□□ -1.17
FOXN1-201ENST00000226247 HRCT1Q6UXD1 115 aa7.71□□□□□ -1.17
FOXN1-201ENST00000226247 BRD3OSQ6XYD6 125 aa7.71□□□□□ -1.17
FOXN1-201ENST00000226247 KIR2DL5BQ8NHK3 375 aa7.71□□□□□ -1.17
FOXN1-201ENST00000226247 DSCR8Q96T75 97 aa7.71□□□□□ -1.17
FOXN1-201ENST00000226247 TMEM126AQ9H061 195 aa7.71□□□□□ -1.17
FOXN1-201ENST00000226247 MINOS1-NBL1R4GNA1 71 aa7.71□□□□□ -1.17
FOXN1-201ENST00000226247 TRBV10-2A0A0K0K1G8 114 aa7.71□□□□□ -1.18
FOXN1-201ENST00000226247 OVOL1O14753 267 aa7.71□□□□□ -1.18
FOXN1-201ENST00000226247 H7C423 109 aa7.71□□□□□ -1.18
FOXN1-201ENST00000226247 PPP1R17O96001 155 aa7.71□□□□□ -1.18
FOXN1-201ENST00000226247 MRPL53Q96EL3 112 aaKnown RBP7.71□□□□□ -1.18
FOXN1-201ENST00000226247 A0A1W2PPR1 153 aa7.7□□□□□ -1.18
FOXN1-201ENST00000226247 M0R2P5 195 aa7.7□□□□□ -1.18
FOXN1-201ENST00000226247 POLR2KP53803 58 aaKnown RBP7.7□□□□□ -1.18
FOXN1-201ENST00000226247 LINC00315P59091 139 aa7.7□□□□□ -1.18
FOXN1-201ENST00000226247 RNF152Q8N8N0 203 aa7.7□□□□□ -1.18
FOXN1-201ENST00000226247 RHPN1-AS1Q9BWJ2 59 aa7.7□□□□□ -1.18
FOXN1-201ENST00000226247 ZNF876PQ49A33 203 aa7.69□□□□□ -1.18
FOXN1-201ENST00000226247 TMEM263Q8WUH6 116 aaKnown RBP7.69□□□□□ -1.18
FOXN1-201ENST00000226247 MDFICQ9P1T7 246 aa7.69□□□□□ -1.18
FOXN1-201ENST00000226247 KLK9Q9UKQ9 250 aa7.69□□□□□ -1.18
FOXN1-201ENST00000226247 U3KQE9 123 aa7.69□□□□□ -1.18
FOXN1-201ENST00000226247 J3KT08 172 aa7.69□□□□□ -1.18
FOXN1-201ENST00000226247 J3QKU1 62 aa7.69□□□□□ -1.18
FOXN1-201ENST00000226247 RHOHQ15669 191 aa7.69□□□□□ -1.18
FOXN1-201ENST00000226247 SBSPONQ8IVN8 264 aa7.69□□□□□ -1.18
FOXN1-201ENST00000226247 AMELXQ99217 191 aa7.69□□□□□ -1.18
FOXN1-201ENST00000226247 ICOSQ9Y6W8 199 aa7.69□□□□□ -1.18
FOXN1-201ENST00000226247 IGKV3D-7A0A0C4DH55 119 aa7.69□□□□□ -1.18
FOXN1-201ENST00000226247 TMEM141Q96I45 108 aa7.69□□□□□ -1.18
FOXN1-201ENST00000226247 DNAJC30Q96LL9 226 aa7.69□□□□□ -1.18
FOXN1-201ENST00000226247 KRTAP10-9P60411 292 aa7.68□□□□□ -1.18
FOXN1-201ENST00000226247 LENEPQ9Y5L5 61 aa7.68□□□□□ -1.18
FOXN1-201ENST00000226247 KIF25-AS1Q9Y6Z4 181 aa7.68□□□□□ -1.18
FOXN1-201ENST00000226247 IGHV1-69DA0A0B4J2H0 117 aa7.68□□□□□ -1.18
FOXN1-201ENST00000226247 SIRPDQ9H106 197 aa7.68□□□□□ -1.18
FOXN1-201ENST00000226247 HOXD3P31249 432 aaPredicted RBP7.68□□□□□ -1.18
FOXN1-201ENST00000226247 C4orf26Q17RF5 130 aa7.68□□□□□ -1.18
FOXN1-201ENST00000226247 C3orf22Q8N5N4 141 aa7.68□□□□□ -1.18
FOXN1-201ENST00000226247 C5orf56Q8N8D9 126 aa7.67□□□□□ -1.18
FOXN1-201ENST00000226247 SDIM1Q6ZPB5 146 aa7.67□□□□□ -1.18
FOXN1-201ENST00000226247 OR13C6PQ8NH95 151 aa7.67□□□□□ -1.18
FOXN1-201ENST00000226247 TIMM17AQ99595 171 aa7.67□□□□□ -1.18
FOXN1-201ENST00000226247 CITED2Q99967 270 aaPredicted RBP7.67□□□□□ -1.18
FOXN1-201ENST00000226247 TMEM223A0PJW6 202 aa7.66□□□□□ -1.18
FOXN1-201ENST00000226247 LEPROTO15243 131 aa7.66□□□□□ -1.18
FOXN1-201ENST00000226247 P0DMU3 169 aa7.66□□□□□ -1.18
FOXN1-201ENST00000226247 FAM231AP0DMU4 169 aa7.66□□□□□ -1.18
FOXN1-201ENST00000226247 FAM231CP0DMU5 169 aa7.66□□□□□ -1.18
FOXN1-201ENST00000226247 BPESC1Q9GZL8 116 aa7.66□□□□□ -1.18
FOXN1-201ENST00000226247 OTOGQ6ZRI0 2925 aa7.66□□□□□ -1.18
FOXN1-201ENST00000226247 IGHV4OR15-8A0A075B7B6 117 aa7.66□□□□□ -1.18
FOXN1-201ENST00000226247 A0A087WW49 117 aa7.66□□□□□ -1.18
FOXN1-201ENST00000226247 CYSTM1Q9H1C7 97 aa7.66□□□□□ -1.18
FOXN1-201ENST00000226247 A0A0J9YXY3 114 aa7.65□□□□□ -1.18
FOXN1-201ENST00000226247 NXPH4O95158 308 aa7.65□□□□□ -1.18
FOXN1-201ENST00000226247 Q6Q795 121 aa7.65□□□□□ -1.18
FOXN1-201ENST00000226247 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.65□□□□□ -1.18
FOXN1-201ENST00000226247 KNCNA6PVL3 124 aa7.65□□□□□ -1.18
FOXN1-201ENST00000226247 IGHV3-30-3P0DP02 117 aa7.65□□□□□ -1.18
FOXN1-201ENST00000226247 BLCAPP62952 87 aa7.65□□□□□ -1.18
FOXN1-201ENST00000226247 ADAMTSL4-AS1Q5T5F5 129 aa7.65□□□□□ -1.18
FOXN1-201ENST00000226247 A0A087WVE0 104 aa7.65□□□□□ -1.19
FOXN1-201ENST00000226247 SOCS3O14543 225 aa7.65□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms