RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 AVPP01185 164 aa13.84□□□□□ -0.19
CLIP2-201ENST00000223398 REG3AQ06141 175 aa13.84□□□□□ -0.19
CLIP2-201ENST00000223398 LRCOL1A6NCL2 159 aa13.84□□□□□ -0.19
CLIP2-201ENST00000223398 PSMB8P28062 276 aa13.84□□□□□ -0.19
CLIP2-201ENST00000223398 C19orf71A6NCJ1 209 aa13.84□□□□□ -0.19
CLIP2-201ENST00000223398 IGLV2-18A0A075B6J9 118 aa13.84□□□□□ -0.19
CLIP2-201ENST00000223398 SMIM9A6NGZ8 99 aa13.83□□□□□ -0.19
CLIP2-201ENST00000223398 MIR7-3HGQ8N6C7 128 aa13.83□□□□□ -0.19
CLIP2-201ENST00000223398 ZFAND3Q9H8U3 227 aa13.83□□□□□ -0.2
CLIP2-201ENST00000223398 IFITM1P13164 125 aa13.83□□□□□ -0.2
CLIP2-201ENST00000223398 FUSP35637 526 aaKnown RBP eCLIP13.83□□□□□ -0.2
CLIP2-201ENST00000223398 WDR87Q6ZQQ6 2873 aa13.83□□□□□ -0.2
CLIP2-201ENST00000223398 OXLD1Q5BKU9 147 aa13.83□□□□□ -0.2
CLIP2-201ENST00000223398 F8W1H4 67 aa13.82□□□□□ -0.2
CLIP2-201ENST00000223398 TRACP01848 142 aa13.82□□□□□ -0.2
CLIP2-201ENST00000223398 TLN1Q9Y490 2541 aaKnown RBP13.82□□□□□ -0.2
CLIP2-201ENST00000223398 M0R2N4 97 aa13.82□□□□□ -0.2
CLIP2-201ENST00000223398 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.82□□□□□ -0.2
CLIP2-201ENST00000223398 CDPF1Q6NVV7 123 aa13.81□□□□□ -0.2
CLIP2-201ENST00000223398 Q6ZVH6 145 aa13.81□□□□□ -0.2
CLIP2-201ENST00000223398 MUC22E2RYF6 1773 aaPredicted RBP13.81□□□□□ -0.2
CLIP2-201ENST00000223398 CXCL5P42830 114 aa13.81□□□□□ -0.2
CLIP2-201ENST00000223398 EIF4EBP1Q13541 118 aaPredicted RBP13.81□□□□□ -0.2
CLIP2-201ENST00000223398 C9orf153Q5TBE3 101 aa13.81□□□□□ -0.2
CLIP2-201ENST00000223398 LINC01545Q5VT33 79 aa13.8□□□□□ -0.2
CLIP2-201ENST00000223398 MIFP14174 115 aa13.79□□□□□ -0.2
CLIP2-201ENST00000223398 DSCAML1Q8TD84 2053 aa13.79□□□□□ -0.2
CLIP2-201ENST00000223398 ODF3Q96PU9 254 aa13.79□□□□□ -0.2
CLIP2-201ENST00000223398 JMJD1CQ15652 2540 aa13.79□□□□□ -0.2
CLIP2-201ENST00000223398 K7EP13 123 aa13.79□□□□□ -0.2
CLIP2-201ENST00000223398 ZNF295-AS1Q8N0V1 137 aa13.79□□□□□ -0.2
CLIP2-201ENST00000223398 ZFAND2AQ8N6M9 145 aa13.79□□□□□ -0.2
CLIP2-201ENST00000223398 CRYBA4P53673 196 aa13.78□□□□□ -0.2
CLIP2-201ENST00000223398 TANC2Q9HCD6 1990 aa13.78□□□□□ -0.2
CLIP2-201ENST00000223398 ARHGAP32A7KAX9 2087 aa13.78□□□□□ -0.2
CLIP2-201ENST00000223398 PROK1P58294 105 aa13.77□□□□□ -0.2
CLIP2-201ENST00000223398 CHCHD10Q8WYQ3 142 aaPredicted RBP13.77□□□□□ -0.2
CLIP2-201ENST00000223398 C14orf177Q52M58 125 aa13.77□□□□□ -0.2
CLIP2-201ENST00000223398 LINC00467Q9BRT7 94 aa13.77□□□□□ -0.2
CLIP2-201ENST00000223398 TDRG1Q3Y452 100 aa13.77□□□□□ -0.21
CLIP2-201ENST00000223398 DOPEY1Q5JWR5 2465 aa13.77□□□□□ -0.21
CLIP2-201ENST00000223398 BBC3Q96PG8 261 aaPredicted RBP13.77□□□□□ -0.21
CLIP2-201ENST00000223398 PRM2P04554 102 aa13.76□□□□□ -0.21
CLIP2-201ENST00000223398 IGHV1-58A0A0C4DH39 117 aa13.76□□□□□ -0.21
CLIP2-201ENST00000223398 DIRC1Q969H9 104 aa13.76□□□□□ -0.21
CLIP2-201ENST00000223398 H0YGX0 51 aa13.76□□□□□ -0.21
CLIP2-201ENST00000223398 HIGD2AQ9BW72 106 aa13.76□□□□□ -0.21
CLIP2-201ENST00000223398 LECT2O14960 151 aa13.75□□□□□ -0.21
CLIP2-201ENST00000223398 PLXNB1O43157 2135 aa13.75□□□□□ -0.21
CLIP2-201ENST00000223398 Q8N6K4 173 aa13.75□□□□□ -0.21
CLIP2-201ENST00000223398 C10orf142B7Z368 130 aa13.75□□□□□ -0.21
CLIP2-201ENST00000223398 IGLV2-8P01709 118 aa13.74□□□□□ -0.21
CLIP2-201ENST00000223398 CFAP126Q5VTH2 177 aa13.74□□□□□ -0.21
CLIP2-201ENST00000223398 NEXN-AS1Q8NBZ9 246 aa13.74□□□□□ -0.21
CLIP2-201ENST00000223398 KIAA1549Q9HCM3 1950 aa13.74□□□□□ -0.21
CLIP2-201ENST00000223398 LY6G6CO95867 125 aa13.74□□□□□ -0.21
CLIP2-201ENST00000223398 A0A096LNI7 61 aa13.74□□□□□ -0.21
CLIP2-201ENST00000223398 NPSP0C0P6 89 aa13.74□□□□□ -0.21
CLIP2-201ENST00000223398 MYO9AB2RTY4 2548 aa13.74□□□□□ -0.21
CLIP2-201ENST00000223398 TRAV10A0A0B4J240 114 aa13.73□□□□□ -0.21
CLIP2-201ENST00000223398 Q8N976 141 aa13.73□□□□□ -0.21
CLIP2-201ENST00000223398 E9PLD3 99 aa13.73□□□□□ -0.21
CLIP2-201ENST00000223398 NFE4Q86UQ8 179 aa13.73□□□□□ -0.21
CLIP2-201ENST00000223398 ANKRD29Q8N6D5 301 aa13.73□□□□□ -0.21
CLIP2-201ENST00000223398 PTPRSQ13332 1948 aa13.73□□□□□ -0.21
CLIP2-201ENST00000223398 ODF1Q14990 250 aa13.73□□□□□ -0.21
CLIP2-201ENST00000223398 TNRC6BQ9UPQ9 1833 aaKnown RBP13.72□□□□□ -0.21
CLIP2-201ENST00000223398 A0A087WZ39 114 aa13.72□□□□□ -0.21
CLIP2-201ENST00000223398 A0A1W2PPR1 153 aa13.72□□□□□ -0.21
CLIP2-201ENST00000223398 IGLC6P0CF74 106 aa13.71□□□□□ -0.21
CLIP2-201ENST00000223398 FXYD2P54710 66 aa13.71□□□□□ -0.21
CLIP2-201ENST00000223398 B9D2Q9BPU9 175 aa13.71□□□□□ -0.21
CLIP2-201ENST00000223398 NDUFB1O75438 58 aa13.71□□□□□ -0.21
CLIP2-201ENST00000223398 CLEC2BQ92478 149 aa13.7□□□□□ -0.22
CLIP2-201ENST00000223398 COA6Q5JTJ3 125 aaKnown RBP13.69□□□□□ -0.22
CLIP2-201ENST00000223398 IGLV1-40P01703 118 aa13.69□□□□□ -0.22
CLIP2-201ENST00000223398 NREPQ16612 68 aa13.68□□□□□ -0.22
CLIP2-201ENST00000223398 CEP295Q9C0D2 2601 aa13.68□□□□□ -0.22
CLIP2-201ENST00000223398 TRBV6-8A0A0A6YYG3 113 aa13.68□□□□□ -0.22
CLIP2-201ENST00000223398 NANOS2P60321 138 aaKnown RBP13.68□□□□□ -0.22
CLIP2-201ENST00000223398 KPRPQ5T749 579 aaPredicted RBP13.68□□□□□ -0.22
CLIP2-201ENST00000223398 C2CD3Q4AC94 2353 aa13.68□□□□□ -0.22
CLIP2-201ENST00000223398 LOC100131303A0A0U1RQF7 123 aa13.68□□□□□ -0.22
CLIP2-201ENST00000223398 EDN2P20800 178 aa13.67□□□□□ -0.22
CLIP2-201ENST00000223398 FAM19A5Q7Z5A7 132 aaPredicted RBP13.67□□□□□ -0.22
CLIP2-201ENST00000223398 CRIP1P50238 77 aa13.67□□□□□ -0.22
CLIP2-201ENST00000223398 MLST8Q9BVC4 326 aa13.67□□□□□ -0.22
CLIP2-201ENST00000223398 A0A0J9YWU9 116 aa13.67□□□□□ -0.22
CLIP2-201ENST00000223398 UFSP1Q6NVU6 142 aa13.67□□□□□ -0.22
CLIP2-201ENST00000223398 COX7BP24311 80 aa13.66□□□□□ -0.22
CLIP2-201ENST00000223398 CDKN2A-AS1Q9UH64 79 aa13.66□□□□□ -0.22
CLIP2-201ENST00000223398 ZFYVE26Q68DK2 2539 aa13.66□□□□□ -0.22
CLIP2-201ENST00000223398 A0A1B0GXF2 115 aa13.66□□□□□ -0.22
CLIP2-201ENST00000223398 IGHV4-30-4P0DP06 118 aa13.66□□□□□ -0.22
CLIP2-201ENST00000223398 XAGE1AQ9HD64 81 aa13.66□□□□□ -0.22
CLIP2-201ENST00000223398 FAM19A1Q7Z5A9 133 aa13.66□□□□□ -0.22
CLIP2-201ENST00000223398 TRBV6-4A0A1B0GX49 114 aa13.65□□□□□ -0.22
CLIP2-201ENST00000223398 LINC00526Q96FQ7 95 aa13.65□□□□□ -0.22
CLIP2-201ENST00000223398 CLUHP3Q96NS8 147 aa13.64□□□□□ -0.23
CLIP2-201ENST00000223398 MBD6Q96DN6 1003 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms