RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 COTL1Q14019 142 aa8.45□□□□□ -1.06
LSM5-201ENST00000223084 C10orf91Q5T1B1 145 aa8.45□□□□□ -1.06
LSM5-201ENST00000223084 MRPL54Q6P161 138 aaKnown RBP8.45□□□□□ -1.06
LSM5-201ENST00000223084 FRZBQ92765 325 aa8.45□□□□□ -1.06
LSM5-201ENST00000223084 CARHSP1Q9Y2V2 147 aaKnown RBP8.45□□□□□ -1.06
LSM5-201ENST00000223084 KIAA1109Q2LD37 5005 aa8.45□□□□□ -1.06
LSM5-201ENST00000223084 LRCOL1A6NCL2 159 aa8.44□□□□□ -1.06
LSM5-201ENST00000223084 EREGO14944 169 aa8.44□□□□□ -1.06
LSM5-201ENST00000223084 NCR2O95944 276 aa8.44□□□□□ -1.06
LSM5-201ENST00000223084 ANGP03950 147 aaKnown RBP8.44□□□□□ -1.06
LSM5-201ENST00000223084 RPS10P46783 165 aaKnown RBP8.44□□□□□ -1.06
LSM5-201ENST00000223084 RBX1P62877 108 aa8.44□□□□□ -1.06
LSM5-201ENST00000223084 ELOBQ15370 118 aa8.44□□□□□ -1.06
LSM5-201ENST00000223084 TMEM243Q9BU79 118 aa8.44□□□□□ -1.06
LSM5-201ENST00000223084 LRP1BQ9NZR2 4599 aa8.43□□□□□ -1.06
LSM5-201ENST00000223084 IGKV2D-24A0A075B6R9 120 aa8.43□□□□□ -1.06
LSM5-201ENST00000223084 SDHAF1A6NFY7 115 aa8.43□□□□□ -1.06
LSM5-201ENST00000223084 PPP1R2P9O14990 202 aa8.43□□□□□ -1.06
LSM5-201ENST00000223084 AMTP48728 403 aa8.43□□□□□ -1.06
LSM5-201ENST00000223084 WFDC2Q14508 124 aa8.43□□□□□ -1.06
LSM5-201ENST00000223084 ENHOQ6UWT2 76 aa8.43□□□□□ -1.06
LSM5-201ENST00000223084 SLC7A5P1Q8MH63 180 aa8.43□□□□□ -1.06
LSM5-201ENST00000223084 MAPKAPK5-AS1Q8N8E1 139 aa8.43□□□□□ -1.06
LSM5-201ENST00000223084 MRAP2Q96G30 205 aa8.43□□□□□ -1.06
LSM5-201ENST00000223084 TM2D2Q9BX73 214 aa8.43□□□□□ -1.06
LSM5-201ENST00000223084 DNAH5Q8TE73 4624 aa8.42□□□□□ -1.06
LSM5-201ENST00000223084 TRBV6-5A0A0K0K1A5 114 aa8.42□□□□□ -1.06
LSM5-201ENST00000223084 MT-ND4LP03901 98 aa8.42□□□□□ -1.06
LSM5-201ENST00000223084 PMCHP20382 165 aa8.42□□□□□ -1.06
LSM5-201ENST00000223084 PKIAP61925 76 aa8.42□□□□□ -1.06
LSM5-201ENST00000223084 FAM104BQ5XKR9 115 aa8.42□□□□□ -1.06
LSM5-201ENST00000223084 CLPSL2Q6UWE3 100 aa8.42□□□□□ -1.06
LSM5-201ENST00000223084 ST20Q9HBF5 79 aa8.42□□□□□ -1.06
LSM5-201ENST00000223084 IGLV4-60A0A075B6I1 120 aa8.41□□□□□ -1.06
LSM5-201ENST00000223084 A0A1B0GW15 77 aa8.41□□□□□ -1.06
LSM5-201ENST00000223084 A0A1B0GXF2 115 aa8.41□□□□□ -1.06
LSM5-201ENST00000223084 LECT2O14960 151 aa8.41□□□□□ -1.06
LSM5-201ENST00000223084 HBBP68871 147 aa8.41□□□□□ -1.06
LSM5-201ENST00000223084 MRPL51Q4U2R6 128 aaKnown RBP8.41□□□□□ -1.06
LSM5-201ENST00000223084 C20orf203Q8NBC4 194 aa8.41□□□□□ -1.06
LSM5-201ENST00000223084 BAALCQ8WXS3 180 aa8.41□□□□□ -1.06
LSM5-201ENST00000223084 ANAPC16Q96DE5 110 aa8.41□□□□□ -1.06
LSM5-201ENST00000223084 TMEM70Q9BUB7 260 aa8.41□□□□□ -1.06
LSM5-201ENST00000223084 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.4□□□□□ -1.06
LSM5-201ENST00000223084 IGKV2-29A2NJV5 120 aaPredicted RBP8.4□□□□□ -1.06
LSM5-201ENST00000223084 UBE2L6O14933 153 aa8.4□□□□□ -1.06
LSM5-201ENST00000223084 CRPP02741 224 aa8.4□□□□□ -1.06
LSM5-201ENST00000223084 POLR2KP53803 58 aaKnown RBP8.4□□□□□ -1.06
LSM5-201ENST00000223084 Q0VG73 95 aa8.4□□□□□ -1.06
LSM5-201ENST00000223084 LINC00269Q8N2A0 174 aa8.4□□□□□ -1.06
LSM5-201ENST00000223084 NRACQ8N912 160 aa8.4□□□□□ -1.06
LSM5-201ENST00000223084 RMI2Q96E14 147 aa8.4□□□□□ -1.06
LSM5-201ENST00000223084 TMEM242Q9NWH2 141 aa8.4□□□□□ -1.06
LSM5-201ENST00000223084 I3L3M4 83 aa8.39□□□□□ -1.07
LSM5-201ENST00000223084 TSHBP01222 138 aa8.39□□□□□ -1.07
LSM5-201ENST00000223084 APCSP02743 223 aa8.39□□□□□ -1.07
LSM5-201ENST00000223084 SVBPQ8N300 66 aa8.39□□□□□ -1.07
LSM5-201ENST00000223084 Q8N814 137 aa8.39□□□□□ -1.07
LSM5-201ENST00000223084 A0A1B0GUV1 79 aa8.38□□□□□ -1.07
LSM5-201ENST00000223084 S100A8P05109 93 aa8.38□□□□□ -1.07
LSM5-201ENST00000223084 CKS2P33552 79 aa8.38□□□□□ -1.07
LSM5-201ENST00000223084 RHEBQ15382 184 aa8.38□□□□□ -1.07
LSM5-201ENST00000223084 C1orf43Q9BWL3 253 aa8.38□□□□□ -1.07
LSM5-201ENST00000223084 PRR34Q9NV39 138 aa8.38□□□□□ -1.07
LSM5-201ENST00000223084 COX11Q9Y6N1 276 aa8.38□□□□□ -1.07
LSM5-201ENST00000223084 TRBV27A0A0K0K1C4 114 aa8.37□□□□□ -1.07
LSM5-201ENST00000223084 D6R8Y8 96 aa8.37□□□□□ -1.07
LSM5-201ENST00000223084 APOC3P02656 99 aa8.37□□□□□ -1.07
LSM5-201ENST00000223084 SUMO2P61956 95 aaKnown RBP8.37□□□□□ -1.07
LSM5-201ENST00000223084 REG3AQ06141 175 aa8.37□□□□□ -1.07
LSM5-201ENST00000223084 MIAQ16674 131 aa8.37□□□□□ -1.07
LSM5-201ENST00000223084 CDPF1Q6NVV7 123 aa8.37□□□□□ -1.07
LSM5-201ENST00000223084 ATP5L2Q7Z4Y8 100 aa8.37□□□□□ -1.07
LSM5-201ENST00000223084 CLRN3Q8NCR9 226 aa8.37□□□□□ -1.07
LSM5-201ENST00000223084 IGLV10-54A0A075B6I4 117 aa8.36□□□□□ -1.07
LSM5-201ENST00000223084 VCYO14598 125 aa8.36□□□□□ -1.07
LSM5-201ENST00000223084 SNAPINO95295 136 aa8.36□□□□□ -1.07
LSM5-201ENST00000223084 PPP1R17O96001 155 aa8.36□□□□□ -1.07
LSM5-201ENST00000223084 FGF6P10767 208 aa8.36□□□□□ -1.07
LSM5-201ENST00000223084 KRTAP10-1P60331 282 aa8.36□□□□□ -1.07
LSM5-201ENST00000223084 AMMECR1LQ6DCA0 310 aa8.36□□□□□ -1.07
LSM5-201ENST00000223084 RNASEKQ6P5S7 137 aaKnown RBP8.36□□□□□ -1.07
LSM5-201ENST00000223084 CTDSP1Q9GZU7 261 aa8.36□□□□□ -1.07
LSM5-201ENST00000223084 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.35□□□□□ -1.07
LSM5-201ENST00000223084 IGLV5-52A0A0A0MRZ9 124 aa8.35□□□□□ -1.07
LSM5-201ENST00000223084 IGKV3OR2-268A0A0C4DH90 116 aa8.35□□□□□ -1.07
LSM5-201ENST00000223084 TNFRSF6BO95407 300 aa8.35□□□□□ -1.07
LSM5-201ENST00000223084 NPYP01303 97 aa8.35□□□□□ -1.07
LSM5-201ENST00000223084 HLA-DQA1P01909 254 aa8.35□□□□□ -1.07
LSM5-201ENST00000223084 ESDP10768 282 aa8.35□□□□□ -1.07
LSM5-201ENST00000223084 KRTAP26-1Q6PEX3 210 aa8.35□□□□□ -1.07
LSM5-201ENST00000223084 APOBP04114 4563 aaKnown RBP8.35□□□□□ -1.07
LSM5-201ENST00000223084 TRBV24-1A0A075B6N3 115 aa8.34□□□□□ -1.07
LSM5-201ENST00000223084 H7C423 109 aa8.34□□□□□ -1.07
LSM5-201ENST00000223084 FCER1GP30273 86 aa8.34□□□□□ -1.07
LSM5-201ENST00000223084 BTF3L4Q96K17 158 aa8.34□□□□□ -1.07
LSM5-201ENST00000223084 HSPG2P98160 4391 aa8.33□□□□□ -1.08
LSM5-201ENST00000223084 C7orf77A4D0Y5 90 aa8.33□□□□□ -1.08
LSM5-201ENST00000223084 GCSHP23434 173 aa8.33□□□□□ -1.08
LSM5-201ENST00000223084 NTN5Q8WTR8 489 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms