RNA–Protein interactions for RNA: ENST00000218364.4

HTATSF1-201, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 2,775 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-201ENST00000218364 ADARB2-AS1A8MUL3 147 aa16.15■□□□□ 0.18
HTATSF1-201ENST00000218364 DSCR9P59020 149 aa16.15■□□□□ 0.18
HTATSF1-201ENST00000218364 CHCHD7Q9BUK0 85 aa16.15■□□□□ 0.18
HTATSF1-201ENST00000218364 SPANXA1Q9NS26 97 aa16.15■□□□□ 0.18
HTATSF1-201ENST00000218364 COL12A1Q99715 3063 aa16.15■□□□□ 0.18
HTATSF1-201ENST00000218364 KNCNA6PVL3 124 aa16.15■□□□□ 0.18
HTATSF1-201ENST00000218364 UBR5O95071 2799 aaPredicted RBP16.14■□□□□ 0.17
HTATSF1-201ENST00000218364 VPS13CQ709C8 3753 aa16.14■□□□□ 0.17
HTATSF1-201ENST00000218364 VSIG2Q96IQ7 327 aa16.14■□□□□ 0.17
HTATSF1-201ENST00000218364 NDUFA12Q9UI09 145 aa16.14■□□□□ 0.17
HTATSF1-201ENST00000218364 UBE2D4Q9Y2X8 147 aa16.14■□□□□ 0.17
HTATSF1-201ENST00000218364 USP9XQ93008 2570 aaPredicted RBP16.13■□□□□ 0.17
HTATSF1-201ENST00000218364 TRIAP1O43715 76 aa16.13■□□□□ 0.17
HTATSF1-201ENST00000218364 ADAMTSL4-AS1Q5T5F5 129 aa16.13■□□□□ 0.17
HTATSF1-201ENST00000218364 LINC01356Q8N9X3 169 aa16.13■□□□□ 0.17
HTATSF1-201ENST00000218364 DOPEY1Q5JWR5 2465 aa16.12■□□□□ 0.17
HTATSF1-201ENST00000218364 H3BMM0 161 aa16.12■□□□□ 0.17
HTATSF1-201ENST00000218364 HTN1P15515 57 aa16.12■□□□□ 0.17
HTATSF1-201ENST00000218364 RNF183Q96D59 192 aa16.12■□□□□ 0.17
HTATSF1-201ENST00000218364 TRBV10-2A0A0K0K1G8 114 aa16.11■□□□□ 0.17
HTATSF1-201ENST00000218364 DEFB131AP59861 70 aa16.11■□□□□ 0.17
HTATSF1-201ENST00000218364 MIAQ16674 131 aa16.11■□□□□ 0.17
HTATSF1-201ENST00000218364 RBMY1BA6NDE4 496 aaKnown RBP16.11■□□□□ 0.17
HTATSF1-201ENST00000218364 RBMY1EA6NEQ0 496 aaKnown RBP16.11■□□□□ 0.17
HTATSF1-201ENST00000218364 RBMY1DP0C7P1 496 aaKnown RBP16.11■□□□□ 0.17
HTATSF1-201ENST00000218364 RPL13AP40429 203 aaKnown RBP16.11■□□□□ 0.17
HTATSF1-201ENST00000218364 Q6ZSN1 163 aa16.11■□□□□ 0.17
HTATSF1-201ENST00000218364 NTN5Q8WTR8 489 aaPredicted RBP16.11■□□□□ 0.17
HTATSF1-201ENST00000218364 ZNF702PQ9H963 129 aa16.11■□□□□ 0.17
HTATSF1-201ENST00000218364 VPREB3Q9UKI3 123 aa16.11■□□□□ 0.17
HTATSF1-201ENST00000218364 J3QLI3 93 aa16.1■□□□□ 0.17
HTATSF1-201ENST00000218364 PRSS2P07478 247 aa16.1■□□□□ 0.17
HTATSF1-201ENST00000218364 RNASE13Q5GAN3 156 aaKnown RBP16.1■□□□□ 0.17
HTATSF1-201ENST00000218364 DUX3Q96PT4 197 aa16.1■□□□□ 0.17
HTATSF1-201ENST00000218364 Q9UF83 564 aa16.1■□□□□ 0.17
HTATSF1-201ENST00000218364 CITED1Q99966 193 aa16.1■□□□□ 0.17
HTATSF1-201ENST00000218364 ZNF415Q09FC8 603 aa16.09■□□□□ 0.17
HTATSF1-201ENST00000218364 DOPEY2Q9Y3R5 2298 aa16.09■□□□□ 0.17
HTATSF1-201ENST00000218364 TRAV26-1A0A087WT03 109 aa16.09■□□□□ 0.17
HTATSF1-201ENST00000218364 ICOSQ9Y6W8 199 aa16.09■□□□□ 0.17
HTATSF1-201ENST00000218364 PLA2G2AP14555 144 aa16.08■□□□□ 0.16
HTATSF1-201ENST00000218364 ZFAND6Q6FIF0 208 aa16.08■□□□□ 0.16
HTATSF1-201ENST00000218364 DNAJC30Q96LL9 226 aa16.08■□□□□ 0.16
HTATSF1-201ENST00000218364 BEX4Q9NWD9 120 aaPredicted RBP16.08■□□□□ 0.16
HTATSF1-201ENST00000218364 A0A096LNT2 108 aa16.07■□□□□ 0.16
HTATSF1-201ENST00000218364 TIMM17BO60830 172 aa16.07■□□□□ 0.16
HTATSF1-201ENST00000218364 PRM2P04554 102 aa16.07■□□□□ 0.16
HTATSF1-201ENST00000218364 LINC00467Q9BRT7 94 aa16.07■□□□□ 0.16
HTATSF1-201ENST00000218364 YAE1D1Q9NRH1 226 aa16.06■□□□□ 0.16
HTATSF1-201ENST00000218364 J3QKU1 62 aa16.06■□□□□ 0.16
HTATSF1-201ENST00000218364 IGHV3-53P01767 116 aa16.06■□□□□ 0.16
HTATSF1-201ENST00000218364 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.05■□□□□ 0.16
HTATSF1-201ENST00000218364 IGKV2-29A2NJV5 120 aaPredicted RBP16.05■□□□□ 0.16
HTATSF1-201ENST00000218364 A8MZ25 164 aa16.05■□□□□ 0.16
HTATSF1-201ENST00000218364 Q6YL49 198 aa16.05■□□□□ 0.16
HTATSF1-201ENST00000218364 SLURP1P55000 103 aa16.05■□□□□ 0.16
HTATSF1-201ENST00000218364 C11orf72Q8NBR9 251 aa16.05■□□□□ 0.16
HTATSF1-201ENST00000218364 BEAN1Q3B7T3 259 aa16.04■□□□□ 0.16
HTATSF1-201ENST00000218364 TEX29Q8N6K0 151 aa16.04■□□□□ 0.16
HTATSF1-201ENST00000218364 IGLV5-45A0A087WSX0 123 aa16.04■□□□□ 0.16
HTATSF1-201ENST00000218364 IFITM1P13164 125 aa16.04■□□□□ 0.16
HTATSF1-201ENST00000218364 TIRAPP58753 221 aa16.04■□□□□ 0.16
HTATSF1-201ENST00000218364 TMEM61Q8N0U2 210 aa16.04■□□□□ 0.16
HTATSF1-201ENST00000218364 COX6CP09669 75 aa16.03■□□□□ 0.16
HTATSF1-201ENST00000218364 TEX49A0A1B0GTD5 131 aa16.03■□□□□ 0.16
HTATSF1-201ENST00000218364 FSHBP01225 129 aa16.03■□□□□ 0.16
HTATSF1-201ENST00000218364 NRGNQ92686 78 aa16.03■□□□□ 0.16
HTATSF1-201ENST00000218364 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.02■□□□□ 0.16
HTATSF1-201ENST00000218364 H3BT86 120 aa16.02■□□□□ 0.15
HTATSF1-201ENST00000218364 H7C423 109 aa16.02■□□□□ 0.15
HTATSF1-201ENST00000218364 PRRC2AP48634 2157 aaKnown RBP16.01■□□□□ 0.15
HTATSF1-201ENST00000218364 C18orf65Q6ZTR6 163 aa16.01■□□□□ 0.15
HTATSF1-201ENST00000218364 UBE2WQ96B02 151 aa16.01■□□□□ 0.15
HTATSF1-201ENST00000218364 LRRK2Q5S007 2527 aa16.01■□□□□ 0.15
HTATSF1-201ENST00000218364 NACAE9PAV3 2078 aa16.01■□□□□ 0.15
HTATSF1-201ENST00000218364 UTP20O75691 2785 aaKnown RBP16.01■□□□□ 0.15
HTATSF1-201ENST00000218364 RS1O15537 224 aa16.01■□□□□ 0.15
HTATSF1-201ENST00000218364 C2orf82Q6UX34 121 aa16.01■□□□□ 0.15
HTATSF1-201ENST00000218364 NDUFA1O15239 70 aa16■□□□□ 0.15
HTATSF1-201ENST00000218364 DEFB136Q30KP8 78 aa16■□□□□ 0.15
HTATSF1-201ENST00000218364 CDKN2A-AS1Q9UH64 79 aa16■□□□□ 0.15
HTATSF1-201ENST00000218364 Q6ZSV7 163 aa16■□□□□ 0.15
HTATSF1-201ENST00000218364 MAP6D1Q9H9H5 199 aa16■□□□□ 0.15
HTATSF1-201ENST00000218364 IGHV3-38A0A0C4DH36 116 aa15.99■□□□□ 0.15
HTATSF1-201ENST00000218364 LINC01587Q99440 93 aa15.99■□□□□ 0.15
HTATSF1-201ENST00000218364 TRAV8-4A0A0B4J246 113 aa15.99■□□□□ 0.15
HTATSF1-201ENST00000218364 NPC2P61916 151 aa15.99■□□□□ 0.15
HTATSF1-201ENST00000218364 CLUHP3Q96NS8 147 aa15.99■□□□□ 0.15
HTATSF1-201ENST00000218364 ANAPC13Q9BS18 74 aa15.99■□□□□ 0.15
HTATSF1-201ENST00000218364 PEMTQ9UBM1 199 aa15.99■□□□□ 0.15
HTATSF1-201ENST00000218364 LST1O00453 97 aa15.98■□□□□ 0.15
HTATSF1-201ENST00000218364 SNCGO76070 127 aa15.98■□□□□ 0.15
HTATSF1-201ENST00000218364 TMEM101Q96IK0 257 aa15.98■□□□□ 0.15
HTATSF1-201ENST00000218364 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.97■□□□□ 0.15
HTATSF1-201ENST00000218364 TRAV4A0A0B4J268 109 aa15.96■□□□□ 0.15
HTATSF1-201ENST00000218364 GAGE2BQ13066 116 aa15.96■□□□□ 0.15
HTATSF1-201ENST00000218364 GAGE2EQ4V326 116 aa15.96■□□□□ 0.15
HTATSF1-201ENST00000218364 Q6Q795 121 aa15.96■□□□□ 0.15
HTATSF1-201ENST00000218364 GAGE2DQ9UEU5 116 aa15.96■□□□□ 0.15
HTATSF1-201ENST00000218364 CRLF1O75462 422 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 150.7 ms