RNA–Protein interactions for RNA: ENST00000217109.8

CSTF1-201, Transcript of cleavage stimulation factor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-201ENST00000217109 ZMAT4Q9H898 229 aa7.24□□□□□ -1.25
CSTF1-201ENST00000217109 H3BMM0 161 aa7.24□□□□□ -1.25
CSTF1-201ENST00000217109 LEPROTO15243 131 aa7.24□□□□□ -1.25
CSTF1-201ENST00000217109 Q6YL49 198 aa7.24□□□□□ -1.25
CSTF1-201ENST00000217109 TRBV20-1A0A075B6N2 111 aa7.24□□□□□ -1.25
CSTF1-201ENST00000217109 CRYGDP07320 174 aa7.24□□□□□ -1.25
CSTF1-201ENST00000217109 CRIP2P52943 208 aaPredicted RBP7.24□□□□□ -1.25
CSTF1-201ENST00000217109 SNCGO76070 127 aa7.23□□□□□ -1.25
CSTF1-201ENST00000217109 CFC1BP0CG36 223 aa7.23□□□□□ -1.25
CSTF1-201ENST00000217109 CFC1P0CG37 223 aa7.23□□□□□ -1.25
CSTF1-201ENST00000217109 C2orf82Q6UX34 121 aa7.23□□□□□ -1.25
CSTF1-201ENST00000217109 A0A1B0GV72 72 aa7.23□□□□□ -1.25
CSTF1-201ENST00000217109 TRBV27A0A0K0K1C4 114 aa7.23□□□□□ -1.25
CSTF1-201ENST00000217109 TMEM89A2RUT3 159 aa7.23□□□□□ -1.25
CSTF1-201ENST00000217109 LGALS9O00182 355 aa7.23□□□□□ -1.25
CSTF1-201ENST00000217109 LINC00158P58513 81 aa7.23□□□□□ -1.25
CSTF1-201ENST00000217109 MORN3Q6PF18 240 aaPredicted RBP7.23□□□□□ -1.25
CSTF1-201ENST00000217109 C10orf126Q8N4M7 172 aa7.23□□□□□ -1.25
CSTF1-201ENST00000217109 A0A0J9YY99 117 aa7.22□□□□□ -1.25
CSTF1-201ENST00000217109 ATXN8Q156A1 80 aa7.22□□□□□ -1.25
CSTF1-201ENST00000217109 MAP6D1Q9H9H5 199 aa7.22□□□□□ -1.25
CSTF1-201ENST00000217109 IGHV3-30-3P0DP02 117 aa7.22□□□□□ -1.25
CSTF1-201ENST00000217109 ZNF702PQ9H963 129 aa7.22□□□□□ -1.25
CSTF1-201ENST00000217109 SLC25A20O43772 301 aa7.22□□□□□ -1.25
CSTF1-201ENST00000217109 TSPAN13O95857 204 aa7.22□□□□□ -1.25
CSTF1-201ENST00000217109 GAGE6Q13070 117 aa7.22□□□□□ -1.25
CSTF1-201ENST00000217109 NDUFA11Q86Y39 141 aa7.21□□□□□ -1.25
CSTF1-201ENST00000217109 WFDC11Q8NEX6 87 aa7.21□□□□□ -1.25
CSTF1-201ENST00000217109 COPS9Q8WXC6 57 aa7.21□□□□□ -1.25
CSTF1-201ENST00000217109 RNASE1P07998 156 aaKnown RBP7.21□□□□□ -1.25
CSTF1-201ENST00000217109 TTC32Q5I0X7 151 aa7.21□□□□□ -1.25
CSTF1-201ENST00000217109 IGLV4-3A0A075B6K6 122 aa7.21□□□□□ -1.26
CSTF1-201ENST00000217109 A8MZ25 164 aa7.21□□□□□ -1.26
CSTF1-201ENST00000217109 DNAL4O96015 105 aa7.21□□□□□ -1.26
CSTF1-201ENST00000217109 PPDPFLQ8WWR9 84 aa7.21□□□□□ -1.26
CSTF1-201ENST00000217109 Q9H8V8 135 aa7.21□□□□□ -1.26
CSTF1-201ENST00000217109 IGIPA6NJ69 53 aa7.21□□□□□ -1.26
CSTF1-201ENST00000217109 ZNF22P17026 224 aaPredicted RBP7.21□□□□□ -1.26
CSTF1-201ENST00000217109 UFSP1Q6NVU6 142 aa7.21□□□□□ -1.26
CSTF1-201ENST00000217109 Q6ZUT4 128 aa7.21□□□□□ -1.26
CSTF1-201ENST00000217109 CITED2Q99967 270 aaPredicted RBP7.21□□□□□ -1.26
CSTF1-201ENST00000217109 TRBV7-3A0A075B6L6 115 aa7.2□□□□□ -1.26
CSTF1-201ENST00000217109 A0A096LPF7 62 aa7.2□□□□□ -1.26
CSTF1-201ENST00000217109 ODF3Q96PU9 254 aa7.2□□□□□ -1.26
CSTF1-201ENST00000217109 CFAP46Q8IYW2 2715 aa7.2□□□□□ -1.26
CSTF1-201ENST00000217109 NTN5Q8WTR8 489 aaPredicted RBP7.2□□□□□ -1.26
CSTF1-201ENST00000217109 C9orf85Q96MD7 179 aa7.2□□□□□ -1.26
CSTF1-201ENST00000217109 TSHBP01222 138 aa7.2□□□□□ -1.26
CSTF1-201ENST00000217109 SPANXA1Q9NS26 97 aa7.2□□□□□ -1.26
CSTF1-201ENST00000217109 FLNAP21333 2647 aaKnown RBP7.2□□□□□ -1.26
CSTF1-201ENST00000217109 DEFB114Q30KQ6 69 aa7.19□□□□□ -1.26
CSTF1-201ENST00000217109 SLC25A29Q8N8R3 303 aa7.19□□□□□ -1.26
CSTF1-201ENST00000217109 C4orf3Q8WVX3 66 aa7.19□□□□□ -1.26
CSTF1-201ENST00000217109 TMEM243Q9BU79 118 aa7.19□□□□□ -1.26
CSTF1-201ENST00000217109 C1QTNF4Q9BXJ3 329 aa7.19□□□□□ -1.26
CSTF1-201ENST00000217109 HECTD1Q9ULT8 2610 aa7.19□□□□□ -1.26
CSTF1-201ENST00000217109 TRAV8-4A0A0B4J246 113 aa7.18□□□□□ -1.26
CSTF1-201ENST00000217109 PRSS47A8MTI9 375 aa7.18□□□□□ -1.26
CSTF1-201ENST00000217109 TCL1BO95988 128 aa7.18□□□□□ -1.26
CSTF1-201ENST00000217109 PFN2P35080 140 aa7.18□□□□□ -1.26
CSTF1-201ENST00000217109 Q6ZTI0 123 aa7.18□□□□□ -1.26
CSTF1-201ENST00000217109 LINC00467Q9BRT7 94 aa7.18□□□□□ -1.26
CSTF1-201ENST00000217109 IGSF10Q6WRI0 2623 aa7.18□□□□□ -1.26
CSTF1-201ENST00000217109 TRBV6-5A0A0K0K1A5 114 aa7.18□□□□□ -1.26
CSTF1-201ENST00000217109 ITPR1Q14643 2758 aa7.18□□□□□ -1.26
CSTF1-201ENST00000217109 DNAJC9-AS1A6NH13 148 aa7.18□□□□□ -1.26
CSTF1-201ENST00000217109 PAX4O43316 350 aa7.18□□□□□ -1.26
CSTF1-201ENST00000217109 INSL3P51460 131 aa7.18□□□□□ -1.26
CSTF1-201ENST00000217109 CKS1BP61024 79 aa7.18□□□□□ -1.26
CSTF1-201ENST00000217109 SPANXB1Q9NS25 103 aaPredicted RBP7.18□□□□□ -1.26
CSTF1-201ENST00000217109 C6orf226Q5I0X4 101 aa7.18□□□□□ -1.26
CSTF1-201ENST00000217109 Q6ZSV7 163 aa7.18□□□□□ -1.26
CSTF1-201ENST00000217109 CDKN2A-AS1Q9UH64 79 aa7.18□□□□□ -1.26
CSTF1-201ENST00000217109 A0A0J9YXY3 114 aa7.17□□□□□ -1.26
CSTF1-201ENST00000217109 TSPEAR-AS2P59090 65 aa7.17□□□□□ -1.26
CSTF1-201ENST00000217109 HERVK_113P63121 156 aa7.17□□□□□ -1.26
CSTF1-201ENST00000217109 FOXI1Q12951 378 aa7.17□□□□□ -1.26
CSTF1-201ENST00000217109 CLPSL2Q6UWE3 100 aa7.17□□□□□ -1.26
CSTF1-201ENST00000217109 ZNF580Q9UK33 172 aa7.17□□□□□ -1.26
CSTF1-201ENST00000217109 IGLV4-69A0A075B6H9 119 aa7.17□□□□□ -1.26
CSTF1-201ENST00000217109 TMEM223A0PJW6 202 aa7.17□□□□□ -1.26
CSTF1-201ENST00000217109 CFAP126Q5VTH2 177 aa7.17□□□□□ -1.26
CSTF1-201ENST00000217109 KIF25-AS1Q9Y6Z4 181 aa7.17□□□□□ -1.26
CSTF1-201ENST00000217109 CMC4P56277 68 aaPredicted RBP7.17□□□□□ -1.26
CSTF1-201ENST00000217109 IGHV1-58A0A0C4DH39 117 aa7.16□□□□□ -1.26
CSTF1-201ENST00000217109 GAGE2BQ13066 116 aa7.16□□□□□ -1.26
CSTF1-201ENST00000217109 GAGE2EQ4V326 116 aa7.16□□□□□ -1.26
CSTF1-201ENST00000217109 GAGE2DQ9UEU5 116 aa7.16□□□□□ -1.26
CSTF1-201ENST00000217109 ITPR3Q14573 2671 aa7.16□□□□□ -1.26
CSTF1-201ENST00000217109 MUC4Q99102 2169 aa7.16□□□□□ -1.26
CSTF1-201ENST00000217109 ZNF843Q8N446 348 aa7.16□□□□□ -1.26
CSTF1-201ENST00000217109 LINC00315P59091 139 aa7.16□□□□□ -1.26
CSTF1-201ENST00000217109 TEN1Q86WV5 123 aa7.16□□□□□ -1.26
CSTF1-201ENST00000217109 ANKRD29Q8N6D5 301 aa7.16□□□□□ -1.26
CSTF1-201ENST00000217109 ANAPC13Q9BS18 74 aa7.16□□□□□ -1.26
CSTF1-201ENST00000217109 CRPP02741 224 aa7.15□□□□□ -1.26
CSTF1-201ENST00000217109 NFE4Q86UQ8 179 aa7.15□□□□□ -1.26
CSTF1-201ENST00000217109 ZNF575Q86XF7 245 aa7.15□□□□□ -1.26
CSTF1-201ENST00000217109 WFDC10AQ9H1F0 79 aa7.15□□□□□ -1.26
CSTF1-201ENST00000217109 IGHV3-30P01768 117 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms