RNA–Protein interactions for RNA: ENST00000200652.3

SLC22A4-201, Transcript of solute carrier family 22 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC22A4, Length 2,201 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC22A4-201ENST00000200652 IGLV1-51P01701 117 aa13.07□□□□□ -0.32
SLC22A4-201ENST00000200652 CMC4P56277 68 aaPredicted RBP13.07□□□□□ -0.32
SLC22A4-201ENST00000200652 VCX2Q9H322 139 aa13.07□□□□□ -0.32
SLC22A4-201ENST00000200652 GTF2H5Q6ZYL4 71 aa13.06□□□□□ -0.32
SLC22A4-201ENST00000200652 FAM104AQ969W3 186 aa13.06□□□□□ -0.32
SLC22A4-201ENST00000200652 DNAJC30Q96LL9 226 aa13.06□□□□□ -0.32
SLC22A4-201ENST00000200652 MTORP42345 2549 aa13.06□□□□□ -0.32
SLC22A4-201ENST00000200652 SAMD5Q5TGI4 173 aa13.05□□□□□ -0.32
SLC22A4-201ENST00000200652 RNASE8Q8TDE3 154 aaKnown RBP13.05□□□□□ -0.32
SLC22A4-201ENST00000200652 K7EP34 96 aa13.05□□□□□ -0.32
SLC22A4-201ENST00000200652 TSPEAR-AS2P59090 65 aa13.05□□□□□ -0.32
SLC22A4-201ENST00000200652 SCGB1D4Q6XE38 83 aa13.05□□□□□ -0.32
SLC22A4-201ENST00000200652 CHCHD7Q9BUK0 85 aa13.05□□□□□ -0.32
SLC22A4-201ENST00000200652 C12orf74Q32Q52 190 aa13.04□□□□□ -0.32
SLC22A4-201ENST00000200652 GIG44P09565 113 aaPredicted RBP13.04□□□□□ -0.32
SLC22A4-201ENST00000200652 AMELXQ99217 191 aa13.04□□□□□ -0.32
SLC22A4-201ENST00000200652 WFDC10AQ9H1F0 79 aa13.04□□□□□ -0.32
SLC22A4-201ENST00000200652 C19orf73Q9NVV2 129 aa13.04□□□□□ -0.32
SLC22A4-201ENST00000200652 SETD2Q9BYW2 2564 aaPredicted RBP13.03□□□□□ -0.32
SLC22A4-201ENST00000200652 TRGV1A0A0A0MS02 117 aa13.03□□□□□ -0.32
SLC22A4-201ENST00000200652 A0A0J9YXV3 536 aa13.03□□□□□ -0.32
SLC22A4-201ENST00000200652 GAGE12BA1L429 117 aa13.03□□□□□ -0.32
SLC22A4-201ENST00000200652 CEMP1Q6PRD7 247 aaPredicted RBP13.03□□□□□ -0.32
SLC22A4-201ENST00000200652 TMEM223A0PJW6 202 aa13.03□□□□□ -0.32
SLC22A4-201ENST00000200652 FAM110AQ9BQ89 295 aa13.03□□□□□ -0.32
SLC22A4-201ENST00000200652 IGHV3-38A0A0C4DH36 116 aa13.02□□□□□ -0.33
SLC22A4-201ENST00000200652 FABP2P12104 132 aa13.02□□□□□ -0.33
SLC22A4-201ENST00000200652 ZNF22P17026 224 aaPredicted RBP13.02□□□□□ -0.33
SLC22A4-201ENST00000200652 TMEM263Q8WUH6 116 aaKnown RBP13.02□□□□□ -0.33
SLC22A4-201ENST00000200652 SPCS1Q9Y6A9 102 aa13.02□□□□□ -0.33
SLC22A4-201ENST00000200652 J3QQQ9 107 aa13.01□□□□□ -0.33
SLC22A4-201ENST00000200652 CRYBA4P53673 196 aa13.01□□□□□ -0.33
SLC22A4-201ENST00000200652 A0A0J9YY99 117 aa13.01□□□□□ -0.33
SLC22A4-201ENST00000200652 A0A1B0GWB2 263 aa13.01□□□□□ -0.33
SLC22A4-201ENST00000200652 LY6G6DO95868 133 aa13.01□□□□□ -0.33
SLC22A4-201ENST00000200652 IGLL5B9A064 214 aa13□□□□□ -0.33
SLC22A4-201ENST00000200652 KRTAP10-3P60369 221 aa13□□□□□ -0.33
SLC22A4-201ENST00000200652 Q6ZTI0 123 aa13□□□□□ -0.33
SLC22A4-201ENST00000200652 ZNF479Q96JC4 524 aa13□□□□□ -0.33
SLC22A4-201ENST00000200652 UBE2D4Q9Y2X8 147 aa13□□□□□ -0.33
SLC22A4-201ENST00000200652 FASNP49327 2511 aaKnown RBP13□□□□□ -0.33
SLC22A4-201ENST00000200652 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13□□□□□ -0.33
SLC22A4-201ENST00000200652 IGKV2-29A2NJV5 120 aaPredicted RBP13□□□□□ -0.33
SLC22A4-201ENST00000200652 LEPROTO15243 131 aa13□□□□□ -0.33
SLC22A4-201ENST00000200652 SRSF9Q13242 221 aaKnown RBP eCLIP13□□□□□ -0.33
SLC22A4-201ENST00000200652 COTL1Q14019 142 aa13□□□□□ -0.33
SLC22A4-201ENST00000200652 RPL35AP18077 110 aaKnown RBP12.99□□□□□ -0.33
SLC22A4-201ENST00000200652 SPANXA1Q9NS26 97 aa12.99□□□□□ -0.33
SLC22A4-201ENST00000200652 LGALS3P17931 250 aaKnown RBP12.98□□□□□ -0.33
SLC22A4-201ENST00000200652 RNASE13Q5GAN3 156 aaKnown RBP12.98□□□□□ -0.33
SLC22A4-201ENST00000200652 OR5A1Q8NGJ0 315 aa12.98□□□□□ -0.33
SLC22A4-201ENST00000200652 MRPS36P82909 103 aaKnown RBP12.98□□□□□ -0.33
SLC22A4-201ENST00000200652 HIVEP2P31629 2446 aa12.97□□□□□ -0.33
SLC22A4-201ENST00000200652 SETXQ7Z333 2677 aaKnown RBP12.97□□□□□ -0.33
SLC22A4-201ENST00000200652 NOP10Q9NPE3 64 aaKnown RBP12.97□□□□□ -0.33
SLC22A4-201ENST00000200652 IGHV3-64A0A075B6Q5 118 aa12.96□□□□□ -0.33
SLC22A4-201ENST00000200652 TRAV4A0A0B4J268 109 aa12.96□□□□□ -0.33
SLC22A4-201ENST00000200652 NDUFA11Q86Y39 141 aa12.96□□□□□ -0.33
SLC22A4-201ENST00000200652 SLC25A29Q8N8R3 303 aa12.96□□□□□ -0.33
SLC22A4-201ENST00000200652 SPANXB1Q9NS25 103 aaPredicted RBP12.96□□□□□ -0.33
SLC22A4-201ENST00000200652 PLAC8L1A1L4L8 177 aa12.96□□□□□ -0.34
SLC22A4-201ENST00000200652 DAZ2Q13117 558 aaKnown RBP12.96□□□□□ -0.34
SLC22A4-201ENST00000200652 CSNK1G2-AS1Q8NCQ2 148 aa12.96□□□□□ -0.34
SLC22A4-201ENST00000200652 NIPBLQ6KC79 2804 aaeCLIP12.95□□□□□ -0.342e-7■■□□□ 13.1
SLC22A4-201ENST00000200652 TMEM238LA0A1B0GVL6 79 aa12.94□□□□□ -0.34
SLC22A4-201ENST00000200652 A6NJY4 79 aa12.94□□□□□ -0.34
SLC22A4-201ENST00000200652 K7EQD1 137 aa12.94□□□□□ -0.34
SLC22A4-201ENST00000200652 Q6ZUT4 128 aa12.94□□□□□ -0.34
SLC22A4-201ENST00000200652 C16orf74Q96GX8 76 aa12.94□□□□□ -0.34
SLC22A4-201ENST00000200652 C1QTNF4Q9BXJ3 329 aa12.94□□□□□ -0.34
SLC22A4-201ENST00000200652 RRN3P1Q2M238 152 aa12.94□□□□□ -0.34
SLC22A4-201ENST00000200652 TRBV10-1A0A0K0K1A3 114 aa12.93□□□□□ -0.34
SLC22A4-201ENST00000200652 UBE2D1P51668 147 aa12.93□□□□□ -0.34
SLC22A4-201ENST00000200652 GCN1Q92616 2671 aaKnown RBP12.93□□□□□ -0.34
SLC22A4-201ENST00000200652 IGHV3-30P01768 117 aa12.93□□□□□ -0.34
SLC22A4-201ENST00000200652 IGHV3-30-5P0DP03 117 aa12.93□□□□□ -0.34
SLC22A4-201ENST00000200652 TINCRA0A1B0GVN0 87 aa12.92□□□□□ -0.34
SLC22A4-201ENST00000200652 PF4P02776 101 aa12.92□□□□□ -0.34
SLC22A4-201ENST00000200652 RPL36AP83881 106 aaKnown RBP12.92□□□□□ -0.34
SLC22A4-201ENST00000200652 OCIAD2Q56VL3 154 aa12.92□□□□□ -0.34
SLC22A4-201ENST00000200652 RPL36ALQ969Q0 106 aaKnown RBP12.92□□□□□ -0.34
SLC22A4-201ENST00000200652 JMJD1CQ15652 2540 aa12.92□□□□□ -0.34
SLC22A4-201ENST00000200652 IGHV3-30-3P0DP02 117 aa12.92□□□□□ -0.34
SLC22A4-201ENST00000200652 LINC00482Q8N8I6 264 aa12.92□□□□□ -0.34
SLC22A4-201ENST00000200652 RBX1P62877 108 aa12.91□□□□□ -0.34
SLC22A4-201ENST00000200652 TIMM21Q9BVV7 248 aa12.91□□□□□ -0.34
SLC22A4-201ENST00000200652 TRAV8-3A0A0A6YYJ7 113 aa12.9□□□□□ -0.34
SLC22A4-201ENST00000200652 GAGE7O76087 117 aa12.9□□□□□ -0.34
SLC22A4-201ENST00000200652 GAGE12FP0CL80 117 aa12.9□□□□□ -0.34
SLC22A4-201ENST00000200652 GAGE12GP0CL81 117 aa12.9□□□□□ -0.34
SLC22A4-201ENST00000200652 GAGE12IP0CL82 117 aa12.9□□□□□ -0.34
SLC22A4-201ENST00000200652 OVOL2Q9BRP0 275 aa12.9□□□□□ -0.34
SLC22A4-201ENST00000200652 UBE2D3P61077 147 aa12.89□□□□□ -0.35
SLC22A4-201ENST00000200652 UBE2D2P62837 147 aa12.89□□□□□ -0.35
SLC22A4-201ENST00000200652 DAZ4Q86SG3 579 aaKnown RBP12.89□□□□□ -0.35
SLC22A4-201ENST00000200652 DAZ3Q9NR90 486 aaKnown RBP12.89□□□□□ -0.35
SLC22A4-201ENST00000200652 PGPEP1Q9NXJ5 209 aa12.89□□□□□ -0.35
SLC22A4-201ENST00000200652 IGHV1-58A0A0C4DH39 117 aa12.89□□□□□ -0.35
SLC22A4-201ENST00000200652 INAFM1C9JVW0 142 aa12.89□□□□□ -0.35
SLC22A4-201ENST00000200652 DGAT2L7PQ6IED9 249 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms