RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 CST9LQ9H4G1 147 aa13.25□□□□□ -0.29
CTSA-201ENST00000191018 SMIM9A6NGZ8 99 aa13.24□□□□□ -0.29
CTSA-201ENST00000191018 CHCHD7Q9BUK0 85 aa13.24□□□□□ -0.29
CTSA-201ENST00000191018 TRBV7-3A0A075B6L6 115 aa13.23□□□□□ -0.29
CTSA-201ENST00000191018 TRGV2A0A075B6R0 118 aa13.23□□□□□ -0.29
CTSA-201ENST00000191018 NMUP48645 174 aa13.23□□□□□ -0.29
CTSA-201ENST00000191018 PCP2Q8IVA1 136 aa13.23□□□□□ -0.29
CTSA-201ENST00000191018 SLC25A29Q8N8R3 303 aa13.23□□□□□ -0.29
CTSA-201ENST00000191018 PYGO1Q9Y3Y4 419 aa13.23□□□□□ -0.29
CTSA-201ENST00000191018 IGLV4-69A0A075B6H9 119 aa13.23□□□□□ -0.29
CTSA-201ENST00000191018 PRIMA1Q86XR5 153 aa13.23□□□□□ -0.29
CTSA-201ENST00000191018 LINC00612Q8N6U2 182 aa13.23□□□□□ -0.29
CTSA-201ENST00000191018 ZNRF2Q8NHG8 242 aa13.23□□□□□ -0.29
CTSA-201ENST00000191018 APOC4P55056 127 aa13.22□□□□□ -0.29
CTSA-201ENST00000191018 PHLDA1Q8WV24 401 aaPredicted RBP13.22□□□□□ -0.29
CTSA-201ENST00000191018 FBN1P35555 2871 aaKnown RBP13.21□□□□□ -0.29
CTSA-201ENST00000191018 IGHV3-38A0A0C4DH36 116 aa13.21□□□□□ -0.29
CTSA-201ENST00000191018 RPL36AP83881 106 aaKnown RBP13.21□□□□□ -0.29
CTSA-201ENST00000191018 COTL1Q14019 142 aa13.21□□□□□ -0.29
CTSA-201ENST00000191018 RPL36ALQ969Q0 106 aaKnown RBP13.21□□□□□ -0.29
CTSA-201ENST00000191018 IGLV4-3A0A075B6K6 122 aa13.21□□□□□ -0.3
CTSA-201ENST00000191018 BATFQ16520 125 aa13.21□□□□□ -0.3
CTSA-201ENST00000191018 FAM104AQ969W3 186 aa13.21□□□□□ -0.3
CTSA-201ENST00000191018 OPRPNQ99935 248 aaPredicted RBP13.21□□□□□ -0.3
CTSA-201ENST00000191018 TRBV6-4A0A1B0GX49 114 aa13.2□□□□□ -0.3
CTSA-201ENST00000191018 SIVA1O15304 175 aa13.2□□□□□ -0.3
CTSA-201ENST00000191018 NPSP0C0P6 89 aa13.2□□□□□ -0.3
CTSA-201ENST00000191018 PAPPA-AS1Q5QFB9 102 aa13.2□□□□□ -0.3
CTSA-201ENST00000191018 SHISA2Q6UWI4 295 aa13.2□□□□□ -0.3
CTSA-201ENST00000191018 C3orf56Q8N813 242 aa13.2□□□□□ -0.3
CTSA-201ENST00000191018 HINT1P49773 126 aaPredicted RBP13.19□□□□□ -0.3
CTSA-201ENST00000191018 EMP1P54849 157 aa13.19□□□□□ -0.3
CTSA-201ENST00000191018 UBE2D3P61077 147 aa13.19□□□□□ -0.3
CTSA-201ENST00000191018 UBE2D2P62837 147 aa13.19□□□□□ -0.3
CTSA-201ENST00000191018 A0A1B0GV90 55 aa13.19□□□□□ -0.3
CTSA-201ENST00000191018 C11orf86A6NJI1 115 aa13.19□□□□□ -0.3
CTSA-201ENST00000191018 MPV17L2Q567V2 206 aa13.19□□□□□ -0.3
CTSA-201ENST00000191018 CRYBA4P53673 196 aa13.18□□□□□ -0.3
CTSA-201ENST00000191018 FHL2Q14192 279 aa13.18□□□□□ -0.3
CTSA-201ENST00000191018 DAZ4Q86SG3 579 aaKnown RBP13.18□□□□□ -0.3
CTSA-201ENST00000191018 DAZ3Q9NR90 486 aaKnown RBP13.18□□□□□ -0.3
CTSA-201ENST00000191018 UBE2D4Q9Y2X8 147 aa13.18□□□□□ -0.3
CTSA-201ENST00000191018 DEFB135Q30KP9 77 aa13.17□□□□□ -0.3
CTSA-201ENST00000191018 AMELXQ99217 191 aa13.17□□□□□ -0.3
CTSA-201ENST00000191018 TTTY13Q9BZ97 58 aa13.17□□□□□ -0.3
CTSA-201ENST00000191018 SPANXA1Q9NS26 97 aa13.17□□□□□ -0.3
CTSA-201ENST00000191018 IGHV4-30-4P0DP06 118 aa13.16□□□□□ -0.3
CTSA-201ENST00000191018 NFE4Q86UQ8 179 aa13.16□□□□□ -0.3
CTSA-201ENST00000191018 TRGV4A0A0C4DH28 118 aa13.16□□□□□ -0.3
CTSA-201ENST00000191018 E9PLD3 99 aa13.16□□□□□ -0.3
CTSA-201ENST00000191018 OXLD1Q5BKU9 147 aa13.16□□□□□ -0.3
CTSA-201ENST00000191018 COL5A1-AS1Q5SY13 56 aa13.16□□□□□ -0.3
CTSA-201ENST00000191018 C12orf54Q6X4T0 127 aa13.16□□□□□ -0.3
CTSA-201ENST00000191018 VCX2Q9H322 139 aa13.16□□□□□ -0.3
CTSA-201ENST00000191018 ZMAT5Q9UDW3 170 aaKnown RBP13.16□□□□□ -0.3
CTSA-201ENST00000191018 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.15□□□□□ -0.3
CTSA-201ENST00000191018 IGKV2-29A2NJV5 120 aaPredicted RBP13.15□□□□□ -0.3
CTSA-201ENST00000191018 GAGE12JA6NER3 117 aa13.15□□□□□ -0.3
CTSA-201ENST00000191018 GAGE1Q13065 139 aa13.15□□□□□ -0.3
CTSA-201ENST00000191018 GAGE4Q13068 117 aa13.15□□□□□ -0.3
CTSA-201ENST00000191018 GAGE5Q13069 117 aa13.15□□□□□ -0.3
CTSA-201ENST00000191018 GAGE13Q4V321 117 aa13.15□□□□□ -0.3
CTSA-201ENST00000191018 CEMP1Q6PRD7 247 aaPredicted RBP13.15□□□□□ -0.3
CTSA-201ENST00000191018 BVES-AS1Q5T3Y7 98 aa13.14□□□□□ -0.31
CTSA-201ENST00000191018 NTM-AS1Q6ZSK4 140 aa13.14□□□□□ -0.31
CTSA-201ENST00000191018 OR11H2Q8NH07 326 aa13.14□□□□□ -0.31
CTSA-201ENST00000191018 TIMM21Q9BVV7 248 aa13.14□□□□□ -0.31
CTSA-201ENST00000191018 LYRM9A8MSI8 78 aa13.13□□□□□ -0.31
CTSA-201ENST00000191018 DEFB130BP0DP73 79 aa13.13□□□□□ -0.31
CTSA-201ENST00000191018 DEFB130AP0DP74 79 aa13.13□□□□□ -0.31
CTSA-201ENST00000191018 EGFEM1PQ0D2K5 195 aa13.13□□□□□ -0.31
CTSA-201ENST00000191018 TMEM97Q5BJF2 176 aa13.13□□□□□ -0.31
CTSA-201ENST00000191018 MAPKAPK5-AS1Q8N8E1 139 aa13.13□□□□□ -0.31
CTSA-201ENST00000191018 HIGD1BQ9P298 99 aa13.13□□□□□ -0.31
CTSA-201ENST00000191018 LOC100131303A0A0U1RQF7 123 aa13.12□□□□□ -0.31
CTSA-201ENST00000191018 KRTAP10-11P60412 298 aa13.12□□□□□ -0.31
CTSA-201ENST00000191018 GTSF1LQ9H1H1 148 aa13.12□□□□□ -0.31
CTSA-201ENST00000191018 TRBV25-1A0A075B6N4 114 aa13.12□□□□□ -0.31
CTSA-201ENST00000191018 TRAV8-6A0A0B4J262 113 aa13.12□□□□□ -0.31
CTSA-201ENST00000191018 LINC00694P0DN24 101 aa13.12□□□□□ -0.31
CTSA-201ENST00000191018 SBSPONQ8IVN8 264 aa13.12□□□□□ -0.31
CTSA-201ENST00000191018 PRADC1Q9BSG0 188 aa13.12□□□□□ -0.31
CTSA-201ENST00000191018 MRPS36P82909 103 aaKnown RBP13.11□□□□□ -0.31
CTSA-201ENST00000191018 FAM222AQ5U5X8 452 aa13.11□□□□□ -0.31
CTSA-201ENST00000191018 RNF183Q96D59 192 aa13.11□□□□□ -0.31
CTSA-201ENST00000191018 CHAC1Q9BUX1 264 aa13.11□□□□□ -0.31
CTSA-201ENST00000191018 IGHV4-28A0A0C4DH34 117 aa13.1□□□□□ -0.31
CTSA-201ENST00000191018 Q8NAQ8 132 aa13.1□□□□□ -0.31
CTSA-201ENST00000191018 NBEAL2Q6ZNJ1 2754 aa13.1□□□□□ -0.31
CTSA-201ENST00000191018 STAB1Q9NY15 2570 aa13.1□□□□□ -0.31
CTSA-201ENST00000191018 MIFP14174 115 aa13.1□□□□□ -0.31
CTSA-201ENST00000191018 HSD52Q0P140 79 aa13.1□□□□□ -0.31
CTSA-201ENST00000191018 Q6ZUT4 128 aa13.1□□□□□ -0.31
CTSA-201ENST00000191018 A0A0J9YXV3 536 aa13.09□□□□□ -0.31
CTSA-201ENST00000191018 HERVK_113P61574 105 aa13.09□□□□□ -0.31
CTSA-201ENST00000191018 TMEM170BQ5T4T1 132 aa13.09□□□□□ -0.31
CTSA-201ENST00000191018 CSDC2Q9Y534 153 aaKnown RBP13.08□□□□□ -0.32
CTSA-201ENST00000191018 A8MZ25 164 aa13.08□□□□□ -0.32
CTSA-201ENST00000191018 ZNF22P17026 224 aaPredicted RBP13.08□□□□□ -0.32
CTSA-201ENST00000191018 RNASE13Q5GAN3 156 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms