RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 DEFB135Q30KP9 77 aa14.09□□□□□ -0.15
TNFRSF1A-201ENST00000162749 ZFP2Q6ZN57 461 aa14.09□□□□□ -0.15
TNFRSF1A-201ENST00000162749 OVOL2Q9BRP0 275 aa14.09□□□□□ -0.15
TNFRSF1A-201ENST00000162749 A0A087WX48 190 aa14.08□□□□□ -0.16
TNFRSF1A-201ENST00000162749 P0DMU3 169 aa14.08□□□□□ -0.16
TNFRSF1A-201ENST00000162749 FAM231AP0DMU4 169 aa14.08□□□□□ -0.16
TNFRSF1A-201ENST00000162749 FAM231CP0DMU5 169 aa14.08□□□□□ -0.16
TNFRSF1A-201ENST00000162749 TRBV27A0A0K0K1C4 114 aa14.07□□□□□ -0.16
TNFRSF1A-201ENST00000162749 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.07□□□□□ -0.16
TNFRSF1A-201ENST00000162749 TMEM97Q5BJF2 176 aa14.07□□□□□ -0.16
TNFRSF1A-201ENST00000162749 SIVA1O15304 175 aa14.07□□□□□ -0.16
TNFRSF1A-201ENST00000162749 IGHV3-53P01767 116 aa14.07□□□□□ -0.16
TNFRSF1A-201ENST00000162749 VAMP3Q15836 100 aa14.07□□□□□ -0.16
TNFRSF1A-201ENST00000162749 ZC2HC1BQ5TFG8 222 aa14.07□□□□□ -0.16
TNFRSF1A-201ENST00000162749 ZNF479Q96JC4 524 aa14.07□□□□□ -0.16
TNFRSF1A-201ENST00000162749 TTTY13Q9BZ97 58 aa14.06□□□□□ -0.16
TNFRSF1A-201ENST00000162749 Q9UF83 564 aa14.06□□□□□ -0.16
TNFRSF1A-201ENST00000162749 VCYO14598 125 aa14.06□□□□□ -0.16
TNFRSF1A-201ENST00000162749 TRAV4A0A0B4J268 109 aa14.05□□□□□ -0.16
TNFRSF1A-201ENST00000162749 G3V4G9 280 aa14.05□□□□□ -0.16
TNFRSF1A-201ENST00000162749 EMP1P54849 157 aa14.05□□□□□ -0.16
TNFRSF1A-201ENST00000162749 C2orf66Q6UXQ4 117 aa14.05□□□□□ -0.16
TNFRSF1A-201ENST00000162749 SCGB3A1Q96QR1 104 aa14.05□□□□□ -0.16
TNFRSF1A-201ENST00000162749 GAGE12BA1L429 117 aa14.05□□□□□ -0.16
TNFRSF1A-201ENST00000162749 SMIM9A6NGZ8 99 aa14.05□□□□□ -0.16
TNFRSF1A-201ENST00000162749 GAGE7O76087 117 aa14.05□□□□□ -0.16
TNFRSF1A-201ENST00000162749 GAGE12FP0CL80 117 aa14.05□□□□□ -0.16
TNFRSF1A-201ENST00000162749 GAGE12GP0CL81 117 aa14.05□□□□□ -0.16
TNFRSF1A-201ENST00000162749 GAGE12IP0CL82 117 aa14.05□□□□□ -0.16
TNFRSF1A-201ENST00000162749 DEFB104AQ8WTQ1 72 aa14.05□□□□□ -0.16
TNFRSF1A-201ENST00000162749 KIR2DL4Q99706 377 aa14.05□□□□□ -0.16
TNFRSF1A-201ENST00000162749 TRAV12-1A0A0B4J245 112 aa14.04□□□□□ -0.16
TNFRSF1A-201ENST00000162749 ERASQ7Z444 233 aa14.04□□□□□ -0.16
TNFRSF1A-201ENST00000162749 NEXN-AS1Q8NBZ9 246 aa14.03□□□□□ -0.16
TNFRSF1A-201ENST00000162749 TRGV2A0A075B6R0 118 aa14.02□□□□□ -0.16
TNFRSF1A-201ENST00000162749 F8VRH5 84 aa14.02□□□□□ -0.17
TNFRSF1A-201ENST00000162749 SEC11AP67812 179 aa14.02□□□□□ -0.17
TNFRSF1A-201ENST00000162749 HSD52Q0P140 79 aa14.02□□□□□ -0.17
TNFRSF1A-201ENST00000162749 VPS25Q9BRG1 176 aa14.02□□□□□ -0.17
TNFRSF1A-201ENST00000162749 OR11H2Q8NH07 326 aa14.01□□□□□ -0.17
TNFRSF1A-201ENST00000162749 BAALCQ8WXS3 180 aa14.01□□□□□ -0.17
TNFRSF1A-201ENST00000162749 MDFIQ99750 246 aa14.01□□□□□ -0.17
TNFRSF1A-201ENST00000162749 PLNP26678 52 aa14□□□□□ -0.17
TNFRSF1A-201ENST00000162749 TNFRSF18Q9Y5U5 241 aa14□□□□□ -0.17
TNFRSF1A-201ENST00000162749 I3L3M4 83 aa14□□□□□ -0.17
TNFRSF1A-201ENST00000162749 SAMD5Q5TGI4 173 aa14□□□□□ -0.17
TNFRSF1A-201ENST00000162749 CST9LQ9H4G1 147 aa14□□□□□ -0.17
TNFRSF1A-201ENST00000162749 CHTOPQ9Y3Y2 248 aaKnown RBP14□□□□□ -0.17
TNFRSF1A-201ENST00000162749 A8MZ25 164 aa13.99□□□□□ -0.17
TNFRSF1A-201ENST00000162749 OCIAD2Q56VL3 154 aa13.99□□□□□ -0.17
TNFRSF1A-201ENST00000162749 TENM3Q9P273 2699 aa13.99□□□□□ -0.17
TNFRSF1A-201ENST00000162749 TSHBP01222 138 aa13.98□□□□□ -0.17
TNFRSF1A-201ENST00000162749 LINC00612Q8N6U2 182 aa13.98□□□□□ -0.17
TNFRSF1A-201ENST00000162749 MAPKAPK5-AS1Q8N8E1 139 aa13.98□□□□□ -0.17
TNFRSF1A-201ENST00000162749 RNF183Q96D59 192 aa13.98□□□□□ -0.17
TNFRSF1A-201ENST00000162749 SLC25A29Q8N8R3 303 aa13.98□□□□□ -0.17
TNFRSF1A-201ENST00000162749 DNAJC30Q96LL9 226 aa13.98□□□□□ -0.17
TNFRSF1A-201ENST00000162749 HIGD1BQ9P298 99 aa13.98□□□□□ -0.17
TNFRSF1A-201ENST00000162749 TRBV25-1A0A075B6N4 114 aa13.97□□□□□ -0.17
TNFRSF1A-201ENST00000162749 PRSS29PA6NIE9 313 aa13.97□□□□□ -0.17
TNFRSF1A-201ENST00000162749 K7EQD1 137 aa13.97□□□□□ -0.17
TNFRSF1A-201ENST00000162749 IGHV4-28A0A0C4DH34 117 aa13.96□□□□□ -0.17
TNFRSF1A-201ENST00000162749 DEFB130BP0DP73 79 aa13.96□□□□□ -0.17
TNFRSF1A-201ENST00000162749 DEFB130AP0DP74 79 aa13.96□□□□□ -0.17
TNFRSF1A-201ENST00000162749 RIPPLY3P57055 190 aa13.96□□□□□ -0.17
TNFRSF1A-201ENST00000162749 Q8NAQ8 132 aa13.96□□□□□ -0.17
TNFRSF1A-201ENST00000162749 CYSLTR1Q9Y271 337 aa13.96□□□□□ -0.17
TNFRSF1A-201ENST00000162749 IGIPA6NJ69 53 aa13.96□□□□□ -0.17
TNFRSF1A-201ENST00000162749 CIDEAO60543 219 aa13.96□□□□□ -0.17
TNFRSF1A-201ENST00000162749 TP53TG1Q9Y2A0 90 aa13.96□□□□□ -0.17
TNFRSF1A-201ENST00000162749 TRAV8-6A0A0B4J262 113 aa13.95□□□□□ -0.18
TNFRSF1A-201ENST00000162749 DEFB4AO15263 64 aa13.95□□□□□ -0.18
TNFRSF1A-201ENST00000162749 RPL39P62891 51 aaKnown RBP13.95□□□□□ -0.18
TNFRSF1A-201ENST00000162749 RHOHQ15669 191 aa13.95□□□□□ -0.18
TNFRSF1A-201ENST00000162749 TRBV10-1A0A0K0K1A3 114 aa13.95□□□□□ -0.18
TNFRSF1A-201ENST00000162749 MIFP14174 115 aa13.95□□□□□ -0.18
TNFRSF1A-201ENST00000162749 FAM222AQ5U5X8 452 aa13.95□□□□□ -0.18
TNFRSF1A-201ENST00000162749 TRBV7-3A0A075B6L6 115 aa13.94□□□□□ -0.18
TNFRSF1A-201ENST00000162749 CHAC1Q9BUX1 264 aa13.94□□□□□ -0.18
TNFRSF1A-201ENST00000162749 AMMECR1LQ6DCA0 310 aa13.94□□□□□ -0.18
TNFRSF1A-201ENST00000162749 A6NDN8 102 aa13.93□□□□□ -0.18
TNFRSF1A-201ENST00000162749 LYRM9A8MSI8 78 aa13.93□□□□□ -0.18
TNFRSF1A-201ENST00000162749 FHL2Q14192 279 aa13.93□□□□□ -0.18
TNFRSF1A-201ENST00000162749 ZNRF2Q8NHG8 242 aa13.93□□□□□ -0.18
TNFRSF1A-201ENST00000162749 TRGV4A0A0C4DH28 118 aa13.92□□□□□ -0.18
TNFRSF1A-201ENST00000162749 TRBV6-4A0A1B0GX49 114 aa13.92□□□□□ -0.18
TNFRSF1A-201ENST00000162749 H3BRM9 83 aa13.92□□□□□ -0.18
TNFRSF1A-201ENST00000162749 IGHV3-38A0A0C4DH36 116 aa13.92□□□□□ -0.18
TNFRSF1A-201ENST00000162749 LINC01549A6NIU2 74 aa13.92□□□□□ -0.18
TNFRSF1A-201ENST00000162749 C20orf203Q8NBC4 194 aa13.92□□□□□ -0.18
TNFRSF1A-201ENST00000162749 PHLDA1Q8WV24 401 aaPredicted RBP13.92□□□□□ -0.18
TNFRSF1A-201ENST00000162749 RPL36AP83881 106 aaKnown RBP13.91□□□□□ -0.18
TNFRSF1A-201ENST00000162749 RPL36ALQ969Q0 106 aaKnown RBP13.91□□□□□ -0.18
TNFRSF1A-201ENST00000162749 FXYD2P54710 66 aa13.91□□□□□ -0.18
TNFRSF1A-201ENST00000162749 IGLV4-69A0A075B6H9 119 aa13.9□□□□□ -0.18
TNFRSF1A-201ENST00000162749 K7ERU9 68 aa13.9□□□□□ -0.18
TNFRSF1A-201ENST00000162749 GCSHP23434 173 aa13.9□□□□□ -0.18
TNFRSF1A-201ENST00000162749 TIMM17AQ99595 171 aa13.9□□□□□ -0.18
TNFRSF1A-201ENST00000162749 C9orf118A6NHY6 69 aa13.89□□□□□ -0.19
TNFRSF1A-201ENST00000162749 TMEM141Q96I45 108 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 139.9 ms