RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Gp2Q9D733 531 aa12.71□□□□□ -0.38
Trim39-203ENSMUST00000113706 Dram1Q9DC58 238 aa12.71□□□□□ -0.38
Trim39-203ENSMUST00000113706 Olfr779E9PUS9 130 aa12.7□□□□□ -0.38
Trim39-203ENSMUST00000113706 Vmn1r60G3UY47 300 aa12.7□□□□□ -0.38
Trim39-203ENSMUST00000113706 Olfr191L7N1Z8 309 aa12.7□□□□□ -0.38
Trim39-203ENSMUST00000113706 Bmp5P49003 452 aa12.7□□□□□ -0.38
Trim39-203ENSMUST00000113706 Olfr1465Q7TQR2 307 aa12.7□□□□□ -0.38
Trim39-203ENSMUST00000113706 Glrx2Q923X4 156 aa12.7□□□□□ -0.38
Trim39-203ENSMUST00000113706 Timm23Q9WTQ8 209 aa12.7□□□□□ -0.38
Trim39-203ENSMUST00000113706 Gm27027S4R1M6 97 aa12.7□□□□□ -0.38
Trim39-203ENSMUST00000113706 Olfr39E9PVX1 319 aa12.7□□□□□ -0.38
Trim39-203ENSMUST00000113706 Cd79bP15530 228 aa12.7□□□□□ -0.38
Trim39-203ENSMUST00000113706 Il3raP26952 396 aa12.7□□□□□ -0.38
Trim39-203ENSMUST00000113706 Gcm1P70348 436 aa12.7□□□□□ -0.38
Trim39-203ENSMUST00000113706 Gm10803Q3TZS6 135 aa12.7□□□□□ -0.38
Trim39-203ENSMUST00000113706 Gm4792Q569Q2 183 aa12.7□□□□□ -0.38
Trim39-203ENSMUST00000113706 Mrps10Q80ZK0 160 aaKnown RBP12.7□□□□□ -0.38
Trim39-203ENSMUST00000113706 Fam78bQ8BQN5 261 aa12.7□□□□□ -0.38
Trim39-203ENSMUST00000113706 Olfr123Q8VFQ1 309 aa12.7□□□□□ -0.38
Trim39-203ENSMUST00000113706 OtoglF7A4A7 2325 aa12.7□□□□□ -0.38
Trim39-203ENSMUST00000113706 Dynlt3P56387 116 aa12.69□□□□□ -0.38
Trim39-203ENSMUST00000113706 Anapc16Q9CPV2 110 aa12.69□□□□□ -0.38
Trim39-203ENSMUST00000113706 Pygo1Q9D0P5 417 aa12.69□□□□□ -0.38
Trim39-203ENSMUST00000113706 Ndufaf3Q9JKL4 185 aa12.69□□□□□ -0.38
Trim39-203ENSMUST00000113706 Cep250Q60952 2414 aa12.69□□□□□ -0.38
Trim39-203ENSMUST00000113706 Igkv1-132A0A0B4J1H9 120 aa12.69□□□□□ -0.38
Trim39-203ENSMUST00000113706 Gm11565A2A4M7 156 aa12.69□□□□□ -0.38
Trim39-203ENSMUST00000113706 Nat8f7E0CYR6 227 aa12.69□□□□□ -0.38
Trim39-203ENSMUST00000113706 Rph3alQ768S4 302 aa12.69□□□□□ -0.38
Trim39-203ENSMUST00000113706 F930015N05RikQ8C3A3 210 aa12.69□□□□□ -0.38
Trim39-203ENSMUST00000113706 Tmem239Q9DA47 151 aa12.69□□□□□ -0.38
Trim39-203ENSMUST00000113706 CompQ9R0G6 755 aa12.69□□□□□ -0.38
Trim39-203ENSMUST00000113706 Gab2Q9Z1S8 665 aa12.69□□□□□ -0.38
Trim39-203ENSMUST00000113706 Lgals3P16110 264 aaKnown RBP12.69□□□□□ -0.38
Trim39-203ENSMUST00000113706 Cd81P35762 236 aa12.69□□□□□ -0.38
Trim39-203ENSMUST00000113706 Dopey2Q3UHQ6 2295 aa12.68□□□□□ -0.38
Trim39-203ENSMUST00000113706 Ighv14-2A0A075B5R7 117 aa12.68□□□□□ -0.38
Trim39-203ENSMUST00000113706 H2al1jA2BFR3 109 aa12.68□□□□□ -0.38
Trim39-203ENSMUST00000113706 Rnf5O35445 180 aa12.68□□□□□ -0.38
Trim39-203ENSMUST00000113706 Mtco2P00405 227 aaKnown RBP12.68□□□□□ -0.38
Trim39-203ENSMUST00000113706 P06323 132 aa12.68□□□□□ -0.38
Trim39-203ENSMUST00000113706 Hoxb4P10284 250 aa12.68□□□□□ -0.38
Trim39-203ENSMUST00000113706 Edn1P22387 202 aa12.68□□□□□ -0.38
Trim39-203ENSMUST00000113706 Spsb3Q571F5 354 aa12.68□□□□□ -0.38
Trim39-203ENSMUST00000113706 Olfr147Q60886 317 aa12.68□□□□□ -0.38
Trim39-203ENSMUST00000113706 Smim19Q80ZU4 107 aa12.68□□□□□ -0.38
Trim39-203ENSMUST00000113706 Zc2hc1aQ8BJH1 324 aa12.68□□□□□ -0.38
Trim39-203ENSMUST00000113706 Gm9949Q8C9F4 104 aa12.68□□□□□ -0.38
Trim39-203ENSMUST00000113706 Angptl6Q8R0Z6 457 aa12.68□□□□□ -0.38
Trim39-203ENSMUST00000113706 Rhox4bQ9JI43 205 aa12.68□□□□□ -0.38
Trim39-203ENSMUST00000113706 Col6a4A2AX52 2309 aa12.68□□□□□ -0.38
Trim39-203ENSMUST00000113706 Ptpn13Q64512 2453 aa12.68□□□□□ -0.38
Trim39-203ENSMUST00000113706 Gm10203F6QJ09 66 aa12.68□□□□□ -0.38
Trim39-203ENSMUST00000113706 Hist3h2bbQ8CGP0 126 aa12.68□□□□□ -0.38
Trim39-203ENSMUST00000113706 Zmat5Q9CQR5 170 aa12.68□□□□□ -0.38
Trim39-203ENSMUST00000113706 Hist3h2baQ9D2U9 126 aa12.68□□□□□ -0.38
Trim39-203ENSMUST00000113706 Gpa33Q9JKA5 319 aa12.68□□□□□ -0.38
Trim39-203ENSMUST00000113706 Ovol1Q9WTJ2 267 aa12.68□□□□□ -0.38
Trim39-203ENSMUST00000113706 LystP97412 3788 aa12.68□□□□□ -0.38
Trim39-203ENSMUST00000113706 Olfr965Q7TRA7 312 aa12.67□□□□□ -0.38
Trim39-203ENSMUST00000113706 Olfr211Q8VGH2 309 aa12.67□□□□□ -0.38
Trim39-203ENSMUST00000113706 Pdzd11Q9CZG9 140 aa12.67□□□□□ -0.38
Trim39-203ENSMUST00000113706 Rnf125Q9D9R0 233 aa12.67□□□□□ -0.38
Trim39-203ENSMUST00000113706 Trav13n-4A0A0G2JG01 110 aa12.67□□□□□ -0.38
Trim39-203ENSMUST00000113706 Mettl8A2AUU0 281 aa12.67□□□□□ -0.38
Trim39-203ENSMUST00000113706 HaaoQ78JT3 286 aa12.67□□□□□ -0.38
Trim39-203ENSMUST00000113706 Olfr1472Q7TQQ9 314 aa12.67□□□□□ -0.38
Trim39-203ENSMUST00000113706 Olfr411Q7TRW8 315 aa12.67□□□□□ -0.38
Trim39-203ENSMUST00000113706 Rpp25lQ99JH1 163 aa12.67□□□□□ -0.38
Trim39-203ENSMUST00000113706 Hdgfl3Q9JMG7 202 aa12.67□□□□□ -0.38
Trim39-203ENSMUST00000113706 F5O88783 2183 aa12.67□□□□□ -0.38
Trim39-203ENSMUST00000113706 Trav6n-5A0A075B621 112 aa12.67□□□□□ -0.38
Trim39-203ENSMUST00000113706 Trav6-5A0A075B6B5 112 aa12.67□□□□□ -0.38
Trim39-203ENSMUST00000113706 Smim6Q3U0I6 56 aa12.67□□□□□ -0.38
Trim39-203ENSMUST00000113706 Fam173aQ501J2 229 aa12.67□□□□□ -0.38
Trim39-203ENSMUST00000113706 Hectd1Q69ZR2 2618 aaKnown RBP12.67□□□□□ -0.38
Trim39-203ENSMUST00000113706 Trbv3A0A0A6YYE2 117 aa12.66□□□□□ -0.38
Trim39-203ENSMUST00000113706 P01787 123 aa12.66□□□□□ -0.38
Trim39-203ENSMUST00000113706 Mixl1Q9WUI0 231 aa12.66□□□□□ -0.38
Trim39-203ENSMUST00000113706 Tmem95P0DJF3 176 aa12.66□□□□□ -0.38
Trim39-203ENSMUST00000113706 Loxl2P58022 776 aa12.66□□□□□ -0.38
Trim39-203ENSMUST00000113706 Aqp11Q8BHH1 271 aa12.66□□□□□ -0.38
Trim39-203ENSMUST00000113706 Klre1Q8CJC7 226 aa12.66□□□□□ -0.38
Trim39-203ENSMUST00000113706 Olfr1445Q8VFW9 314 aa12.66□□□□□ -0.38
Trim39-203ENSMUST00000113706 Scgb3a2Q920H1 91 aa12.66□□□□□ -0.38
Trim39-203ENSMUST00000113706 Nubp1Q9R060 320 aa12.66□□□□□ -0.38
Trim39-203ENSMUST00000113706 Zfp950A0A0U1RQ46 609 aa12.66□□□□□ -0.38
Trim39-203ENSMUST00000113706 Ido2Q8R0V5 405 aa12.66□□□□□ -0.38
Trim39-203ENSMUST00000113706 Kcnip3Q9QXT8 256 aa12.66□□□□□ -0.38
Trim39-203ENSMUST00000113706 Gm6993A0A1W2P738 69 aa12.65□□□□□ -0.38
Trim39-203ENSMUST00000113706 Olfr1189A2AV11 306 aa12.65□□□□□ -0.38
Trim39-203ENSMUST00000113706 Lmo4P61969 165 aa12.65□□□□□ -0.38
Trim39-203ENSMUST00000113706 Sfrp2P97299 295 aa12.65□□□□□ -0.38
Trim39-203ENSMUST00000113706 Errfi1Q99JZ7 461 aa12.65□□□□□ -0.38
Trim39-203ENSMUST00000113706 MmdQ9CQY7 238 aa12.65□□□□□ -0.38
Trim39-203ENSMUST00000113706 Ndufb3Q9CQZ6 104 aa12.65□□□□□ -0.38
Trim39-203ENSMUST00000113706 Gpr35Q9ES90 307 aa12.65□□□□□ -0.38
Trim39-203ENSMUST00000113706 Gm9195A0A140LHT4 2805 aa12.65□□□□□ -0.38
Trim39-203ENSMUST00000113706 Gata4Q08369 441 aa12.65□□□□□ -0.38
Trim39-203ENSMUST00000113706 Olfr1434Q7TQR9 312 aa12.65□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 114.4 ms