RNA–Protein interactions for RNA: ENSMUST00000001147.4

Col6a1-201, Transcript of Collagen alpha-1(VI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col6a1, Length 4,100 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1-201ENSMUST00000001147 Olfr1265Q8VEZ3 309 aa7.84□□□□□ -1.15
Col6a1-201ENSMUST00000001147 Cldn16Q925N4 235 aa7.84□□□□□ -1.15
Col6a1-201ENSMUST00000001147 Ube2v1Q9CZY3 147 aa7.84□□□□□ -1.15
Col6a1-201ENSMUST00000001147 4930583I09RikQ9D2E3 102 aa7.84□□□□□ -1.15
Col6a1-201ENSMUST00000001147 Gm26920S4R2A5 56 aa7.84□□□□□ -1.15
Col6a1-201ENSMUST00000001147 AgrnA2ASQ1 1950 aa7.84□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Igkv5-37A0A140T8N4 115 aa7.84□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Chd7A2AJK6 2986 aaKnown RBP7.84□□□□□ -1.16
Col6a1-201ENSMUST00000001147 H2al1jA2BFR3 109 aa7.84□□□□□ -1.16
Col6a1-201ENSMUST00000001147 RbpjP31266 526 aa7.84□□□□□ -1.16
Col6a1-201ENSMUST00000001147 F7P70375 446 aa7.84□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Shisal1Q0VBP7 198 aa7.84□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Rtl4Q3URY0 304 aa7.84□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Olfr149Q60888 311 aa7.84□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Ifna12Q80SS5 189 aa7.84□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Gm9945Q8BNZ3 91 aa7.84□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Ighv8-2A0A0A6YW58 119 aa7.83□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Foxi3E0CZH3 425 aa7.83□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Olfr779E9PUS9 130 aa7.83□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Gm10073E9Q3T0 114 aa7.83□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Iqcf6G3UWF2 157 aa7.83□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Prss46Q5M8S2 314 aa7.83□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Timm21Q8CCM6 249 aa7.83□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Tspo2Q9CRZ8 162 aa7.83□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Vmn1r61W4VSP5 300 aa7.83□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Col8a2P25318 699 aa7.83□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Q6PIU9 354 aa7.83□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Znrd1Q791N7 123 aa7.83□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Tas2r114Q7M722 309 aa7.83□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Rhbdd1Q8BHC7 315 aa7.83□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Lamtor2Q9JHS3 125 aa7.83□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Scgb1b19F6WYW0 93 aa7.83□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Rpl27aP14115 148 aaKnown RBP7.83□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Zfp941Q3URY5 674 aa7.83□□□□□ -1.16
Col6a1-201ENSMUST00000001147 AgerQ62151 402 aa7.83□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Gm10277Q6R5C6 214 aa7.83□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Olfr1535Q7TQU0 326 aa7.83□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Rnd1Q8BLR7 232 aa7.83□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Wfdc21Q8BTE6 63 aa7.83□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Eda2rQ8BX35 297 aa7.83□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Spsb4Q8R5B6 273 aa7.83□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Olfr824Q8VFU4 315 aa7.83□□□□□ -1.16
Col6a1-201ENSMUST00000001147 LbhQ9CX60 105 aa7.83□□□□□ -1.16
Col6a1-201ENSMUST00000001147 CcsQ9WU84 274 aa7.83□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Adamts20P59511 1906 aa7.82□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Ighv1-18A0A0A6YXN4 117 aa7.82□□□□□ -1.16
Col6a1-201ENSMUST00000001147 3110082J24RikF6Z6Z2 108 aa7.82□□□□□ -1.16
Col6a1-201ENSMUST00000001147 TfpiO54819 306 aa7.82□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Ccl11P48298 97 aa7.82□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Rnase9P60154 184 aa7.82□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Ms4a13Q5FWC3 203 aa7.82□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Olfr523Q8VFE7 317 aa7.82□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Olfr123Q8VFQ1 309 aa7.82□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Mrpl20Q9CQL4 149 aa7.82□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Lyrm7Q9DA03 104 aa7.82□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Inafm1E9PV59 130 aa7.82□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Gm3512L7N206 146 aa7.82□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Onecut1O08755 465 aa7.82□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Zic3Q62521 466 aa7.82□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Ypel2Q65Z95 119 aa7.82□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Olfr823Q7TRH2 315 aa7.82□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Q8C708 225 aa7.82□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Barx1Q9ER42 254 aa7.82□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Icam4Q9ERM2 262 aa7.82□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Ypel1Q9ESC7 118 aa7.82□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Tmub1Q9JMG3 245 aa7.82□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Gab2Q9Z1S8 665 aa7.82□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Tnrc6aQ3UHK8 1896 aaKnown RBP7.82□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Gm10036E9PYL9 178 aaKnown RBP7.82□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Slc25a17O70579 307 aa7.82□□□□□ -1.16
Col6a1-201ENSMUST00000001147 B020031M17RikQ3UT11 173 aa7.82□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Isg15Q64339 161 aaKnown RBP7.82□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Gm10190Q8BSD7 107 aa7.82□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Olfr491Q8VG06 310 aa7.82□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Tnfrsf13cQ9D8D0 175 aa7.82□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Fstl3Q9EQC7 256 aa7.82□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Gpa33Q9JKA5 319 aa7.82□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Ighv7-3A0A075B5R2 120 aa7.81□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Olfr912A0A1L1SSS5 310 aa7.81□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Gm19684G3UZ45 117 aa7.81□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Gm21775J3KMK6 180 aa7.81□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Pfn1P62962 140 aa7.81□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Trav15-1-dv6-1Q5R1D2 117 aa7.81□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Ppp1r3cQ7TMB3 317 aa7.81□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Rnf182Q8C432 247 aa7.81□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Pxt1Q8K459 51 aa7.81□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Prune2Q52KR3 3084 aa7.81□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Znf385cA2A5E6 429 aa7.81□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Cd209gD3Z5D4 194 aa7.81□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Q3U1D9 316 aa7.81□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Trav6d-4Q5R1I0 115 aa7.81□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Hif1anQ8BLR9 349 aa7.81□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Cdcp2Q8BQH6 427 aa7.81□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Q9CQM1 111 aa7.81□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Rnase6Q9D244 153 aa7.81□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Ccdc71lE9Q4T4 218 aa7.81□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Dlx1Q64317 255 aa7.81□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Gm26558Q8BLW8 286 aa7.81□□□□□ -1.16
Col6a1-201ENSMUST00000001147 Tusc5Q8C838 173 aa7.81□□□□□ -1.16
Col6a1-201ENSMUST00000001147 CrhQ8CIT0 187 aa7.81□□□□□ -1.16
Retrieved 100 of 22,080 RNA–protein pairs in 45.3 ms