RNA–Protein interactions for RNA: ENST00000641828.1

CASC19-260, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 2,001 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-260ENST00000641828 OR13C6PQ8NH95 151 aa4.46□□□□□ -1.69
CASC19-260ENST00000641828 GAFA1Q96PS6 74 aa4.46□□□□□ -1.69
CASC19-260ENST00000641828 KRTAP4-2Q9BYR5 136 aa4.46□□□□□ -1.69
CASC19-260ENST00000641828 RNF7Q9UBF6 113 aa4.46□□□□□ -1.69
CASC19-260ENST00000641828 MALRD1Q5VYJ5 2156 aa4.46□□□□□ -1.7
CASC19-260ENST00000641828 BSNQ9UPA5 3926 aa4.46□□□□□ -1.7
CASC19-260ENST00000641828 A0A0B4J2C4 111 aa4.46□□□□□ -1.7
CASC19-260ENST00000641828 IGLV1-44P01699 117 aa4.46□□□□□ -1.7
CASC19-260ENST00000641828 GLRXP35754 106 aa4.46□□□□□ -1.7
CASC19-260ENST00000641828 EBI3Q14213 229 aa4.46□□□□□ -1.7
CASC19-260ENST00000641828 ZNF56Q15929 161 aa4.46□□□□□ -1.7
CASC19-260ENST00000641828 C10orf25Q5T742 122 aa4.46□□□□□ -1.7
CASC19-260ENST00000641828 C9orf153Q5TBE3 101 aa4.46□□□□□ -1.7
CASC19-260ENST00000641828 FAM19A5Q7Z5A7 132 aaPredicted RBP4.46□□□□□ -1.7
CASC19-260ENST00000641828 LINC00526Q96FQ7 95 aa4.46□□□□□ -1.7
CASC19-260ENST00000641828 SMIM2Q9BVW6 85 aa4.46□□□□□ -1.7
CASC19-260ENST00000641828 CTSZQ9UBR2 303 aa4.46□□□□□ -1.7
CASC19-260ENST00000641828 CSMD1Q96PZ7 3565 aa4.46□□□□□ -1.7
CASC19-260ENST00000641828 IGHV4-4A0A075B6R2 117 aa4.45□□□□□ -1.7
CASC19-260ENST00000641828 IGKV2-40A0A087WW87 121 aaPredicted RBP4.45□□□□□ -1.7
CASC19-260ENST00000641828 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.45□□□□□ -1.7
CASC19-260ENST00000641828 IGHV4-28A0A0C4DH34 117 aa4.45□□□□□ -1.7
CASC19-260ENST00000641828 TRBV30A0A0K0K1B3 111 aa4.45□□□□□ -1.7
CASC19-260ENST00000641828 H3BT86 120 aa4.45□□□□□ -1.7
CASC19-260ENST00000641828 IGKV2D-40P01614 121 aaPredicted RBP4.45□□□□□ -1.7
CASC19-260ENST00000641828 ACYP1P07311 99 aa4.45□□□□□ -1.7
CASC19-260ENST00000641828 CCL4P13236 92 aa4.45□□□□□ -1.7
CASC19-260ENST00000641828 HERVK_113P63121 156 aa4.45□□□□□ -1.7
CASC19-260ENST00000641828 TMEM170BQ5T4T1 132 aa4.45□□□□□ -1.7
CASC19-260ENST00000641828 PRIMA1Q86XR5 153 aa4.45□□□□□ -1.7
CASC19-260ENST00000641828 TMEM263Q8WUH6 116 aaKnown RBP4.45□□□□□ -1.7
CASC19-260ENST00000641828 CCL13Q99616 98 aa4.45□□□□□ -1.7
CASC19-260ENST00000641828 SLC50A1Q9BRV3 221 aa4.45□□□□□ -1.7
CASC19-260ENST00000641828 HES7Q9BYE0 225 aa4.45□□□□□ -1.7
CASC19-260ENST00000641828 UBTD1Q9HAC8 227 aa4.45□□□□□ -1.7
CASC19-260ENST00000641828 NIPBLQ6KC79 2804 aaeCLIP4.45□□□□□ -1.7
CASC19-260ENST00000641828 LOC107984640A0A0U1RRK4 108 aa4.45□□□□□ -1.7
CASC19-260ENST00000641828 CRYGBP07316 175 aa4.45□□□□□ -1.7
CASC19-260ENST00000641828 FAM201AQ5SY85 155 aa4.45□□□□□ -1.7
CASC19-260ENST00000641828 TEX36Q5VZQ5 186 aa4.45□□□□□ -1.7
CASC19-260ENST00000641828 DUX4L9Q6RFH8 374 aaPredicted RBP4.45□□□□□ -1.7
CASC19-260ENST00000641828 C2orf82Q6UX34 121 aa4.45□□□□□ -1.7
CASC19-260ENST00000641828 TMEM219Q86XT9 240 aa4.45□□□□□ -1.7
CASC19-260ENST00000641828 POM121L12Q8N7R1 296 aa4.45□□□□□ -1.7
CASC19-260ENST00000641828 CSPG4Q6UVK1 2322 aa4.44□□□□□ -1.7
CASC19-260ENST00000641828 CADP27708 2225 aa4.44□□□□□ -1.7
CASC19-260ENST00000641828 OOSP1A8MZH6 123 aa4.44□□□□□ -1.7
CASC19-260ENST00000641828 ENSAO43768 121 aaKnown RBP4.44□□□□□ -1.7
CASC19-260ENST00000641828 TRGV3P03979 118 aa4.44□□□□□ -1.7
CASC19-260ENST00000641828 APELAP0DMC3 54 aa4.44□□□□□ -1.7
CASC19-260ENST00000641828 EMP1P54849 157 aa4.44□□□□□ -1.7
CASC19-260ENST00000641828 KRTAP10-9P60411 292 aa4.44□□□□□ -1.7
CASC19-260ENST00000641828 ODF3L2Q3SX64 289 aa4.44□□□□□ -1.7
CASC19-260ENST00000641828 C2orf66Q6UXQ4 117 aa4.44□□□□□ -1.7
CASC19-260ENST00000641828 Q8N1X5 172 aa4.44□□□□□ -1.7
CASC19-260ENST00000641828 FAM216BQ8N7L0 139 aa4.44□□□□□ -1.7
CASC19-260ENST00000641828 C3orf56Q8N813 242 aa4.44□□□□□ -1.7
CASC19-260ENST00000641828 MPLKIPQ8TAP9 179 aa4.44□□□□□ -1.7
CASC19-260ENST00000641828 TRGV5A0A0B4J1U4 118 aa4.43□□□□□ -1.7
CASC19-260ENST00000641828 TRAV26-2A0A0B4J265 109 aa4.43□□□□□ -1.7
CASC19-260ENST00000641828 IGHV1-18A0A0C4DH31 117 aa4.43□□□□□ -1.7
CASC19-260ENST00000641828 FAM236AA0A1B0GUQ0 79 aa4.43□□□□□ -1.7
CASC19-260ENST00000641828 FAM236BA0A1B0GV22 79 aa4.43□□□□□ -1.7
CASC19-260ENST00000641828 RBAKDNA6NC62 111 aa4.43□□□□□ -1.7
CASC19-260ENST00000641828 C11orf86A6NJI1 115 aa4.43□□□□□ -1.7
CASC19-260ENST00000641828 NTN3O00634 580 aaPredicted RBP4.43□□□□□ -1.7
CASC19-260ENST00000641828 SPRY3O43610 288 aa4.43□□□□□ -1.7
CASC19-260ENST00000641828 PPP1R17O96001 155 aa4.43□□□□□ -1.7
CASC19-260ENST00000641828 IGHV4-39P01824 125 aa4.43□□□□□ -1.7
CASC19-260ENST00000641828 PRB4P10163 310 aaPredicted RBP4.43□□□□□ -1.7
CASC19-260ENST00000641828 TNFAIP6P98066 277 aaPredicted RBP4.43□□□□□ -1.7
CASC19-260ENST00000641828 PMVKQ15126 192 aa4.43□□□□□ -1.7
CASC19-260ENST00000641828 ATP1A1-AS1Q5TC04 95 aa4.43□□□□□ -1.7
CASC19-260ENST00000641828 Q75L30 129 aa4.43□□□□□ -1.7
CASC19-260ENST00000641828 DEFB108BQ8NET1 73 aa4.43□□□□□ -1.7
CASC19-260ENST00000641828 Q8TAT8 98 aa4.43□□□□□ -1.7
CASC19-260ENST00000641828 NBEAL1Q6ZS30 2694 aa4.43□□□□□ -1.7
CASC19-260ENST00000641828 IGHV1-69DA0A0B4J2H0 117 aa4.43□□□□□ -1.7
CASC19-260ENST00000641828 IGKV3D-20A0A0C4DH25 116 aa4.43□□□□□ -1.7
CASC19-260ENST00000641828 H7C423 109 aa4.43□□□□□ -1.7
CASC19-260ENST00000641828 K7EIM0 57 aa4.43□□□□□ -1.7
CASC19-260ENST00000641828 CRYGDP07320 174 aa4.43□□□□□ -1.7
CASC19-260ENST00000641828 COX6CP09669 75 aa4.43□□□□□ -1.7
CASC19-260ENST00000641828 Q1RN00 199 aa4.43□□□□□ -1.7
CASC19-260ENST00000641828 DEFB127Q9H1M4 99 aa4.43□□□□□ -1.7
CASC19-260ENST00000641828 PKDREJQ9NTG1 2253 aa4.42□□□□□ -1.7
CASC19-260ENST00000641828 PRRC2AP48634 2157 aaKnown RBP4.42□□□□□ -1.7
CASC19-260ENST00000641828 IGLV4-69A0A075B6H9 119 aa4.42□□□□□ -1.7
CASC19-260ENST00000641828 IGLV3-9A0A075B6K5 115 aa4.42□□□□□ -1.7
CASC19-260ENST00000641828 IGHV7-4-1A0A0J9YVY3 117 aa4.42□□□□□ -1.7
CASC19-260ENST00000641828 J3QQQ9 107 aa4.42□□□□□ -1.7
CASC19-260ENST00000641828 CCL3L1P16619 93 aa4.42□□□□□ -1.7
CASC19-260ENST00000641828 LGALS3P17931 250 aaKnown RBP4.42□□□□□ -1.7
CASC19-260ENST00000641828 SPANXN1Q5VSR9 72 aa4.42□□□□□ -1.7
CASC19-260ENST00000641828 ZNRF2Q8NHG8 242 aa4.42□□□□□ -1.7
CASC19-260ENST00000641828 METTL26Q96S19 204 aa4.42□□□□□ -1.7
CASC19-260ENST00000641828 SPRR3Q9UBC9 169 aa4.42□□□□□ -1.7
CASC19-260ENST00000641828 AKAP9Q99996 3911 aa4.41□□□□□ -1.7
CASC19-260ENST00000641828 TRAV17A0A0B4J275 112 aa4.41□□□□□ -1.7
CASC19-260ENST00000641828 TMEM178BH3BS89 294 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms