RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 ATP6V1G1O75348 118 aa15□□□□□ -0.01
TSPAN9-208ENST00000640568 ELOBQ15370 118 aa15□□□□□ -0.01
TSPAN9-208ENST00000640568 NEGR1Q7Z3B1 354 aa15□□□□□ -0.01
TSPAN9-208ENST00000640568 NEXN-AS1Q8NBZ9 246 aa15□□□□□ -0.01
TSPAN9-208ENST00000640568 MRAP2Q96G30 205 aa15□□□□□ -0.01
TSPAN9-208ENST00000640568 TNFRSF18Q9Y5U5 241 aa15□□□□□ -0.01
TSPAN9-208ENST00000640568 TRBV7-3A0A075B6L6 115 aa14.99□□□□□ -0.01
TSPAN9-208ENST00000640568 DNAJC30Q96LL9 226 aa14.99□□□□□ -0.01
TSPAN9-208ENST00000640568 S100A1P23297 94 aa14.98□□□□□ -0.01
TSPAN9-208ENST00000640568 COX19Q49B96 90 aa14.98□□□□□ -0.01
TSPAN9-208ENST00000640568 CBLN2Q8IUK8 224 aa14.98□□□□□ -0.01
TSPAN9-208ENST00000640568 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.98□□□□□ -0.01
TSPAN9-208ENST00000640568 Q9UF83 564 aa14.98□□□□□ -0.01
TSPAN9-208ENST00000640568 TGIF2-C20orf24A0A0A6YYL0 155 aa14.97□□□□□ -0.01
TSPAN9-208ENST00000640568 MRPL51Q4U2R6 128 aaKnown RBP14.97□□□□□ -0.01
TSPAN9-208ENST00000640568 ATP6V0E2Q8NHE4 81 aa14.97□□□□□ -0.01
TSPAN9-208ENST00000640568 NIT2Q9NQR4 276 aa14.97□□□□□ -0.01
TSPAN9-208ENST00000640568 CKS2P33552 79 aa14.96□□□□□ -0.01
TSPAN9-208ENST00000640568 CCL18P55774 89 aa14.96□□□□□ -0.01
TSPAN9-208ENST00000640568 OR10J3Q5JRS4 329 aa14.96□□□□□ -0.01
TSPAN9-208ENST00000640568 UBE2DNLQ8IWF7 75 aa14.96□□□□□ -0.01
TSPAN9-208ENST00000640568 TRBV24-1A0A075B6N3 115 aa14.95□□□□□ -0.02
TSPAN9-208ENST00000640568 NCR2O95944 276 aa14.95□□□□□ -0.02
TSPAN9-208ENST00000640568 TMEM136Q6ZRR5 245 aa14.95□□□□□ -0.02
TSPAN9-208ENST00000640568 SMKR1H3BMG3 65 aa14.95□□□□□ -0.02
TSPAN9-208ENST00000640568 HLA-DQA1P01909 254 aa14.95□□□□□ -0.02
TSPAN9-208ENST00000640568 RPL39LQ96EH5 51 aaKnown RBP14.95□□□□□ -0.02
TSPAN9-208ENST00000640568 PPP1R17O96001 155 aa14.94□□□□□ -0.02
TSPAN9-208ENST00000640568 LINC00694P0DN24 101 aa14.94□□□□□ -0.02
TSPAN9-208ENST00000640568 UBE2D3P61077 147 aa14.94□□□□□ -0.02
TSPAN9-208ENST00000640568 UBE2D2P62837 147 aa14.94□□□□□ -0.02
TSPAN9-208ENST00000640568 GNB1LQ9BYB4 327 aa14.94□□□□□ -0.02
TSPAN9-208ENST00000640568 D6R8Y8 96 aa14.93□□□□□ -0.02
TSPAN9-208ENST00000640568 MT-ND6P03923 174 aa14.93□□□□□ -0.02
TSPAN9-208ENST00000640568 TENM2Q9NT68 2774 aa14.92□□□□□ -0.02
TSPAN9-208ENST00000640568 PPBPP02775 128 aa14.92□□□□□ -0.02
TSPAN9-208ENST00000640568 ESRGQ1W209 222 aa14.92□□□□□ -0.02
TSPAN9-208ENST00000640568 LYPD5Q6UWN5 251 aa14.92□□□□□ -0.02
TSPAN9-208ENST00000640568 DAZ4Q86SG3 579 aaKnown RBP14.92□□□□□ -0.02
TSPAN9-208ENST00000640568 ORMDL3Q8N138 153 aa14.92□□□□□ -0.02
TSPAN9-208ENST00000640568 LYSTQ99698 3801 aa14.92□□□□□ -0.02
TSPAN9-208ENST00000640568 GTSF1LQ9H1H1 148 aa14.92□□□□□ -0.02
TSPAN9-208ENST00000640568 DAZ3Q9NR90 486 aaKnown RBP14.92□□□□□ -0.02
TSPAN9-208ENST00000640568 APCSP02743 223 aa14.91□□□□□ -0.02
TSPAN9-208ENST00000640568 ST20Q9HBF5 79 aa14.91□□□□□ -0.02
TSPAN9-208ENST00000640568 IGHV3-38A0A0C4DH36 116 aa14.9□□□□□ -0.02
TSPAN9-208ENST00000640568 GAS8-AS1O95177 125 aa14.9□□□□□ -0.02
TSPAN9-208ENST00000640568 RPS10P46783 165 aaKnown RBP14.9□□□□□ -0.02
TSPAN9-208ENST00000640568 LGALS9CQ6DKI2 356 aa14.9□□□□□ -0.02
TSPAN9-208ENST00000640568 SCO1O75880 301 aa14.89□□□□□ -0.03
TSPAN9-208ENST00000640568 LY6G6CO95867 125 aa14.89□□□□□ -0.03
TSPAN9-208ENST00000640568 YPEL4Q96NS1 127 aa14.89□□□□□ -0.03
TSPAN9-208ENST00000640568 LINC00588Q9Y4M8 146 aa14.89□□□□□ -0.03
TSPAN9-208ENST00000640568 TRBV6-5A0A0K0K1A5 114 aa14.89□□□□□ -0.03
TSPAN9-208ENST00000640568 MRPL18Q9H0U6 180 aaKnown RBP14.89□□□□□ -0.03
TSPAN9-208ENST00000640568 SDHAF1A6NFY7 115 aa14.88□□□□□ -0.03
TSPAN9-208ENST00000640568 TIRAPP58753 221 aa14.88□□□□□ -0.03
TSPAN9-208ENST00000640568 FABP9Q0Z7S8 132 aa14.88□□□□□ -0.03
TSPAN9-208ENST00000640568 NRACQ8N912 160 aa14.88□□□□□ -0.03
TSPAN9-208ENST00000640568 LINC00476Q8WZB0 136 aa14.88□□□□□ -0.03
TSPAN9-208ENST00000640568 PRELID3AQ96N28 172 aa14.88□□□□□ -0.03
TSPAN9-208ENST00000640568 TRAPPC1Q9Y5R8 145 aa14.88□□□□□ -0.03
TSPAN9-208ENST00000640568 TNFRSF6BO95407 300 aa14.87□□□□□ -0.03
TSPAN9-208ENST00000640568 TMEM97Q5BJF2 176 aa14.87□□□□□ -0.03
TSPAN9-208ENST00000640568 MRPS16Q9Y3D3 137 aaKnown RBP14.87□□□□□ -0.03
TSPAN9-208ENST00000640568 ALMS1Q8TCU4 4167 aa14.86□□□□□ -0.03
TSPAN9-208ENST00000640568 SUMO2P61956 95 aaKnown RBP14.86□□□□□ -0.03
TSPAN9-208ENST00000640568 KIAA1644Q3SXP7 199 aa14.86□□□□□ -0.03
TSPAN9-208ENST00000640568 LELP1Q5T871 98 aa14.86□□□□□ -0.03
TSPAN9-208ENST00000640568 PHOX2AO14813 284 aa14.85□□□□□ -0.03
TSPAN9-208ENST00000640568 PMCHP20382 165 aa14.85□□□□□ -0.03
TSPAN9-208ENST00000640568 LAMTOR2Q9Y2Q5 125 aa14.85□□□□□ -0.03
TSPAN9-208ENST00000640568 TRAV8-6A0A0B4J262 113 aa14.84□□□□□ -0.03
TSPAN9-208ENST00000640568 NPYP01303 97 aa14.84□□□□□ -0.03
TSPAN9-208ENST00000640568 COTL1Q14019 142 aa14.84□□□□□ -0.03
TSPAN9-208ENST00000640568 C20orf78Q9BR46 151 aa14.84□□□□□ -0.03
TSPAN9-208ENST00000640568 TMEM70Q9BUB7 260 aa14.84□□□□□ -0.03
TSPAN9-208ENST00000640568 I3L3M4 83 aa14.83□□□□□ -0.03
TSPAN9-208ENST00000640568 UPK3BQ9BT76 320 aa14.83□□□□□ -0.03
TSPAN9-208ENST00000640568 VPS13DQ5THJ4 4388 aa14.82□□□□□ -0.04
TSPAN9-208ENST00000640568 TRBV25-1A0A075B6N4 114 aa14.82□□□□□ -0.04
TSPAN9-208ENST00000640568 TRBV6-8A0A0A6YYG3 113 aa14.82□□□□□ -0.04
TSPAN9-208ENST00000640568 VCYO14598 125 aa14.82□□□□□ -0.04
TSPAN9-208ENST00000640568 POLR2KP53803 58 aaKnown RBP14.82□□□□□ -0.04
TSPAN9-208ENST00000640568 MAP1LC3AQ9H492 121 aa14.82□□□□□ -0.04
TSPAN9-208ENST00000640568 DEFB104AQ8WTQ1 72 aa14.81□□□□□ -0.04
TSPAN9-208ENST00000640568 IGHV1-24A0A0C4DH33 117 aa14.8□□□□□ -0.04
TSPAN9-208ENST00000640568 TRBV27A0A0K0K1C4 114 aa14.8□□□□□ -0.04
TSPAN9-208ENST00000640568 KIR2DL4Q99706 377 aa14.8□□□□□ -0.04
TSPAN9-208ENST00000640568 DNAH1Q9P2D7 4330 aa14.79□□□□□ -0.04
TSPAN9-208ENST00000640568 LCE6AA0A183 80 aa14.79□□□□□ -0.04
TSPAN9-208ENST00000640568 COLCA2A8K830 154 aa14.79□□□□□ -0.04
TSPAN9-208ENST00000640568 SIVA1O15304 175 aa14.79□□□□□ -0.04
TSPAN9-208ENST00000640568 WFDC10BQ8IUB3 73 aa14.79□□□□□ -0.04
TSPAN9-208ENST00000640568 SMIM2Q9BVW6 85 aa14.79□□□□□ -0.04
TSPAN9-208ENST00000640568 Q9H8V8 135 aa14.79□□□□□ -0.04
TSPAN9-208ENST00000640568 LOC389332A0A1B0GUA5 103 aa14.78□□□□□ -0.04
TSPAN9-208ENST00000640568 FCER1GP30273 86 aa14.78□□□□□ -0.04
TSPAN9-208ENST00000640568 AMTP48728 403 aa14.78□□□□□ -0.04
TSPAN9-208ENST00000640568 RPL32P62910 135 aaKnown RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms