RNA–Protein interactions for RNA: ENST00000640077.1

MED17-223, Transcript of mediator complex subunit 17, human

TSL 5

Gene MED17, Length 2,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MED17-223	ENST00000640077	CCL3	P10147	92 aa		3.04	□□□□□ -1.92
MED17-223	ENST00000640077	NNAT	Q16517	81 aa		3.04	□□□□□ -1.92
MED17-223	ENST00000640077	FAM104B	Q5XKR9	115 aa		3.04	□□□□□ -1.92
MED17-223	ENST00000640077	LINC00322	Q6ZN03	302 aa	Predicted RBP	3.04	□□□□□ -1.92
MED17-223	ENST00000640077	DEFB127	Q9H1M4	99 aa		3.04	□□□□□ -1.92
MED17-223	ENST00000640077	AGRN	O00468	2067 aa		3.04	□□□□□ -1.92
MED17-223	ENST00000640077	TEP1	Q99973	2627 aa	Known RBP	3.04	□□□□□ -1.92
MED17-223	ENST00000640077	SHANK1	Q9Y566	2161 aa		3.04	□□□□□ -1.92
MED17-223	ENST00000640077	SPTA1	P02549	2419 aa		3.04	□□□□□ -1.92
MED17-223	ENST00000640077	DMXL2	Q8TDJ6	3036 aa		3.04	□□□□□ -1.92
MED17-223	ENST00000640077	TRBV6-6	A0A0A6YYG2	114 aa		3.04	□□□□□ -1.92
MED17-223	ENST00000640077	TRGV5	A0A0B4J1U4	118 aa		3.04	□□□□□ -1.92
MED17-223	ENST00000640077	PINLYP	A6NC86	204 aa		3.04	□□□□□ -1.92
MED17-223	ENST00000640077	LINC01546	A6NGU7	62 aa		3.04	□□□□□ -1.92
MED17-223	ENST00000640077	ZNF815P	A8K554	130 aa		3.04	□□□□□ -1.92
MED17-223	ENST00000640077	UPK2	O00526	184 aa		3.04	□□□□□ -1.92
MED17-223	ENST00000640077	NDUFA3	O95167	84 aa		3.04	□□□□□ -1.92
MED17-223	ENST00000640077	DLX1	P56177	255 aa		3.04	□□□□□ -1.92
MED17-223	ENST00000640077	FGF12	P61328	243 aa		3.04	□□□□□ -1.92
MED17-223	ENST00000640077	FAM201A	Q5SY85	155 aa		3.04	□□□□□ -1.92
MED17-223	ENST00000640077	MRPL55	Q7Z7F7	128 aa	Known RBP	3.04	□□□□□ -1.92
MED17-223	ENST00000640077	CD177	Q8N6Q3	437 aa		3.04	□□□□□ -1.92
MED17-223	ENST00000640077	ITLN1	Q8WWA0	313 aa		3.04	□□□□□ -1.92
MED17-223	ENST00000640077	FMC1	Q96HJ9	113 aa		3.04	□□□□□ -1.92
MED17-223	ENST00000640077	TMEM243	Q9BU79	118 aa		3.04	□□□□□ -1.92
MED17-223	ENST00000640077	PROK2	Q9HC23	129 aa		3.04	□□□□□ -1.92
MED17-223	ENST00000640077	MED13	Q9UHV7	2174 aa		3.04	□□□□□ -1.92
MED17-223	ENST00000640077	LAMA5	O15230	3695 aa		3.04	□□□□□ -1.92
MED17-223	ENST00000640077	COL6A6	A6NMZ7	2263 aa		3.03	□□□□□ -1.92
MED17-223	ENST00000640077	TRBV7-1	A0A0A6YYK4	115 aa		3.03	□□□□□ -1.92
MED17-223	ENST00000640077	IGHV3-33	P01772	117 aa		3.03	□□□□□ -1.92
MED17-223	ENST00000640077	CKS2	P33552	79 aa		3.03	□□□□□ -1.92
MED17-223	ENST00000640077	MAGEA5	P43359	124 aa		3.03	□□□□□ -1.92
MED17-223	ENST00000640077	KRTAP10-5	P60370	271 aa		3.03	□□□□□ -1.92
MED17-223	ENST00000640077	MRPS36	P82909	103 aa	Known RBP	3.03	□□□□□ -1.92
MED17-223	ENST00000640077	ITLN2	Q8WWU7	325 aa	Predicted RBP	3.03	□□□□□ -1.92
MED17-223	ENST00000640077	EMC6	Q9BV81	110 aa		3.03	□□□□□ -1.92
MED17-223	ENST00000640077	DYNLRB1	Q9NP97	96 aa		3.03	□□□□□ -1.92
MED17-223	ENST00000640077	LAMTOR3	Q9UHA4	124 aa		3.03	□□□□□ -1.92
MED17-223	ENST00000640077	ANKRD17	O75179	2603 aa	Known RBP	3.03	□□□□□ -1.92
MED17-223	ENST00000640077	SEC16A	O15027	2179 aa		3.03	□□□□□ -1.92
MED17-223	ENST00000640077	MYO9A	B2RTY4	2548 aa		3.03	□□□□□ -1.92
MED17-223	ENST00000640077	TRBV30	A0A0K0K1B3	111 aa		3.03	□□□□□ -1.93
MED17-223	ENST00000640077		Q1RN00	199 aa		3.03	□□□□□ -1.93
MED17-223	ENST00000640077	MRPL51	Q4U2R6	128 aa	Known RBP	3.03	□□□□□ -1.93
MED17-223	ENST00000640077	SDIM1	Q6ZPB5	146 aa		3.03	□□□□□ -1.93
MED17-223	ENST00000640077	FP248	Q71RG6	208 aa	Predicted RBP	3.03	□□□□□ -1.93
MED17-223	ENST00000640077	SMCR5	Q8TEV8	140 aa		3.03	□□□□□ -1.93
MED17-223	ENST00000640077	SRSF12	Q8WXF0	261 aa	Known RBP	3.03	□□□□□ -1.93
MED17-223	ENST00000640077	SPTSSA	Q969W0	71 aa		3.03	□□□□□ -1.93
MED17-223	ENST00000640077	PAXX	Q9BUH6	204 aa		3.03	□□□□□ -1.93
MED17-223	ENST00000640077	CFAP46	Q8IYW2	2715 aa		3.02	□□□□□ -1.93
MED17-223	ENST00000640077	PIEZO2	Q9H5I5	2752 aa		3.02	□□□□□ -1.93
MED17-223	ENST00000640077	HEATR1	Q9H583	2144 aa	Known RBP	3.02	□□□□□ -1.93
MED17-223	ENST00000640077	IQCF6	A8MYZ5	107 aa		3.02	□□□□□ -1.93
MED17-223	ENST00000640077		F8VRH5	84 aa		3.02	□□□□□ -1.93
MED17-223	ENST00000640077	IGHV3-30	P01768	117 aa		3.02	□□□□□ -1.93
MED17-223	ENST00000640077	IGHV3-30-5	P0DP03	117 aa		3.02	□□□□□ -1.93
MED17-223	ENST00000640077	ORMDL2	Q53FV1	153 aa		3.02	□□□□□ -1.93
MED17-223	ENST00000640077	ZNF799	Q96GE5	643 aa		3.02	□□□□□ -1.93
MED17-223	ENST00000640077	SPRR3	Q9UBC9	169 aa		3.02	□□□□□ -1.93
MED17-223	ENST00000640077	DOCK10	Q96BY6	2186 aa		3.02	□□□□□ -1.93
MED17-223	ENST00000640077	LOC400499	M0QZD8	3231 aa		3.02	□□□□□ -1.93
MED17-223	ENST00000640077	TRAV12-1	A0A0B4J245	112 aa		3.01	□□□□□ -1.93
MED17-223	ENST00000640077		A0A0J9YY99	117 aa		3.01	□□□□□ -1.93
MED17-223	ENST00000640077	C17orf98	A8MV24	154 aa		3.01	□□□□□ -1.93
MED17-223	ENST00000640077		H7C2G1	150 aa		3.01	□□□□□ -1.93
MED17-223	ENST00000640077	COX6C	P09669	75 aa		3.01	□□□□□ -1.93
MED17-223	ENST00000640077	RNASE2	P10153	161 aa	Known RBP	3.01	□□□□□ -1.93
MED17-223	ENST00000640077	COX6B1	P14854	86 aa		3.01	□□□□□ -1.93
MED17-223	ENST00000640077	RHOH	Q15669	191 aa		3.01	□□□□□ -1.93
MED17-223	ENST00000640077		Q6ZRU5	148 aa		3.01	□□□□□ -1.93
MED17-223	ENST00000640077	LINC00305	Q7Z4B0	112 aa		3.01	□□□□□ -1.93
MED17-223	ENST00000640077	PRR15	Q8IV56	129 aa		3.01	□□□□□ -1.93
MED17-223	ENST00000640077	NUP37	Q8NFH4	326 aa		3.01	□□□□□ -1.93
MED17-223	ENST00000640077	TMEM263	Q8WUH6	116 aa	Known RBP	3.01	□□□□□ -1.93
MED17-223	ENST00000640077	FAM167A-AS1	Q96KT0	104 aa		3.01	□□□□□ -1.93
MED17-223	ENST00000640077	ZNF714	Q96N38	554 aa		3.01	□□□□□ -1.93
MED17-223	ENST00000640077	SLC50A1	Q9BRV3	221 aa		3.01	□□□□□ -1.93
MED17-223	ENST00000640077	TEX15	Q9BXT5	2789 aa		3.01	□□□□□ -1.93
MED17-223	ENST00000640077	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	3.01	□□□□□ -1.93
MED17-223	ENST00000640077		H3BTX0	84 aa		3.01	□□□□□ -1.93
MED17-223	ENST00000640077	SOCS3	O14543	225 aa		3.01	□□□□□ -1.93
MED17-223	ENST00000640077	DUT	P33316	252 aa	Known RBP	3.01	□□□□□ -1.93
MED17-223	ENST00000640077	LINC00596	Q86U02	117 aa		3.01	□□□□□ -1.93
MED17-223	ENST00000640077	EEF1AKMT3	Q96AZ1	226 aa		3.01	□□□□□ -1.93
MED17-223	ENST00000640077	MRPL53	Q96EL3	112 aa	Known RBP	3.01	□□□□□ -1.93
MED17-223	ENST00000640077	S1PR3	Q99500	378 aa		3.01	□□□□□ -1.93
MED17-223	ENST00000640077	OVOL2	Q9BRP0	275 aa		3.01	□□□□□ -1.93
MED17-223	ENST00000640077	DAZ1	Q9NQZ3	744 aa	Known RBP	3.01	□□□□□ -1.93
MED17-223	ENST00000640077	SLC25A15	Q9Y619	301 aa		3.01	□□□□□ -1.93
MED17-223	ENST00000640077	KALRN	O60229	2985 aa		3.01	□□□□□ -1.93
MED17-223	ENST00000640077		A0A1W2PQD3	144 aa		3	□□□□□ -1.93
MED17-223	ENST00000640077	IGHG2	P01859	326 aa		3	□□□□□ -1.93
MED17-223	ENST00000640077	DAZ2	Q13117	558 aa	Known RBP	3	□□□□□ -1.93
MED17-223	ENST00000640077	ERCC8	Q13216	396 aa		3	□□□□□ -1.93
MED17-223	ENST00000640077	DAZ4	Q86SG3	579 aa	Known RBP	3	□□□□□ -1.93
MED17-223	ENST00000640077	SLC25A29	Q8N8R3	303 aa		3	□□□□□ -1.93
MED17-223	ENST00000640077	DAZ3	Q9NR90	486 aa	Known RBP	3	□□□□□ -1.93
MED17-223	ENST00000640077		Q9UF83	564 aa		3	□□□□□ -1.93

Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms