RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 ELOBQ15370 118 aa9.22□□□□□ -0.93
PNKP-228ENST00000637325 NUDT10Q8NFP7 164 aa9.22□□□□□ -0.93
PNKP-228ENST00000637325 RMI2Q96E14 147 aa9.22□□□□□ -0.93
PNKP-228ENST00000637325 NUDT11Q96G61 164 aa9.22□□□□□ -0.93
PNKP-228ENST00000637325 IGLV5-52A0A0A0MRZ9 124 aa9.21□□□□□ -0.94
PNKP-228ENST00000637325 GCSHP23434 173 aa9.21□□□□□ -0.94
PNKP-228ENST00000637325 NKX2-5P52952 324 aaPredicted RBP9.21□□□□□ -0.94
PNKP-228ENST00000637325 LYZL1Q6UWQ5 148 aa9.21□□□□□ -0.94
PNKP-228ENST00000637325 OCC1Q8TAD7 63 aa9.21□□□□□ -0.94
PNKP-228ENST00000637325 CHCHD7Q9BUK0 85 aa9.21□□□□□ -0.94
PNKP-228ENST00000637325 KLK12Q9UKR0 248 aa9.21□□□□□ -0.94
PNKP-228ENST00000637325 KIF25-AS1Q9Y6Z4 181 aa9.21□□□□□ -0.94
PNKP-228ENST00000637325 TRBV6-8A0A0A6YYG3 113 aa9.2□□□□□ -0.94
PNKP-228ENST00000637325 H7C1H1 209 aa9.2□□□□□ -0.94
PNKP-228ENST00000637325 TRGC1P0CF51 173 aa9.2□□□□□ -0.94
PNKP-228ENST00000637325 CEBPGP53567 150 aa9.2□□□□□ -0.94
PNKP-228ENST00000637325 TMEM97Q5BJF2 176 aa9.2□□□□□ -0.94
PNKP-228ENST00000637325 Q8N814 137 aa9.2□□□□□ -0.94
PNKP-228ENST00000637325 NTN5Q8WTR8 489 aaPredicted RBP9.2□□□□□ -0.94
PNKP-228ENST00000637325 RNASE7Q9H1E1 156 aaKnown RBP9.2□□□□□ -0.94
PNKP-228ENST00000637325 COX11Q9Y6N1 276 aa9.2□□□□□ -0.94
PNKP-228ENST00000637325 IGKV2D-24A0A075B6R9 120 aa9.19□□□□□ -0.94
PNKP-228ENST00000637325 TMEM250H0YL14 139 aa9.19□□□□□ -0.94
PNKP-228ENST00000637325 KRTAP10-1P60331 282 aa9.19□□□□□ -0.94
PNKP-228ENST00000637325 PKIAP61925 76 aa9.19□□□□□ -0.94
PNKP-228ENST00000637325 UBE2WQ96B02 151 aa9.19□□□□□ -0.94
PNKP-228ENST00000637325 CHCHD5Q9BSY4 110 aa9.19□□□□□ -0.94
PNKP-228ENST00000637325 EIF5A2Q9GZV4 153 aaKnown RBP9.19□□□□□ -0.94
PNKP-228ENST00000637325 RPP21Q9H633 154 aaKnown RBP9.19□□□□□ -0.94
PNKP-228ENST00000637325 A0A1B0GVG6 124 aa9.18□□□□□ -0.94
PNKP-228ENST00000637325 K7EN84 100 aa9.18□□□□□ -0.94
PNKP-228ENST00000637325 NTF3P20783 257 aa9.18□□□□□ -0.94
PNKP-228ENST00000637325 TWIST1Q15672 202 aa9.18□□□□□ -0.94
PNKP-228ENST00000637325 SUMO4Q6EEV6 95 aa9.18□□□□□ -0.94
PNKP-228ENST00000637325 WDR73Q6P4I2 378 aa9.18□□□□□ -0.94
PNKP-228ENST00000637325 Q8N1X5 172 aa9.18□□□□□ -0.94
PNKP-228ENST00000637325 LYPD6BQ8NI32 183 aa9.18□□□□□ -0.94
PNKP-228ENST00000637325 DNAJC30Q96LL9 226 aa9.18□□□□□ -0.94
PNKP-228ENST00000637325 KRTAP4-5Q9BYR2 181 aa9.18□□□□□ -0.94
PNKP-228ENST00000637325 DPH3P1Q9H4G8 78 aa9.18□□□□□ -0.94
PNKP-228ENST00000637325 M0QY20 66 aa9.17□□□□□ -0.94
PNKP-228ENST00000637325 CRPP02741 224 aa9.17□□□□□ -0.94
PNKP-228ENST00000637325 Q0VG73 95 aa9.17□□□□□ -0.94
PNKP-228ENST00000637325 C15orf54Q8N8G6 183 aa9.17□□□□□ -0.94
PNKP-228ENST00000637325 TRBV25-1A0A075B6N4 114 aa9.16□□□□□ -0.94
PNKP-228ENST00000637325 LECT2O14960 151 aa9.16□□□□□ -0.94
PNKP-228ENST00000637325 GATCO43716 136 aaKnown RBP9.16□□□□□ -0.94
PNKP-228ENST00000637325 ANGP03950 147 aaKnown RBP9.16□□□□□ -0.94
PNKP-228ENST00000637325 RASL11AQ6T310 242 aa9.16□□□□□ -0.94
PNKP-228ENST00000637325 BAALCQ8WXS3 180 aa9.16□□□□□ -0.94
PNKP-228ENST00000637325 ABCA13Q86UQ4 5058 aa9.16□□□□□ -0.94
PNKP-228ENST00000637325 CTRLP40313 264 aa9.15□□□□□ -0.94
PNKP-228ENST00000637325 WFDC2Q14508 124 aa9.15□□□□□ -0.94
PNKP-228ENST00000637325 MPV17L2Q567V2 206 aa9.15□□□□□ -0.94
PNKP-228ENST00000637325 SMIM15Q7Z3B0 74 aa9.15□□□□□ -0.94
PNKP-228ENST00000637325 IGHV1-24A0A0C4DH33 117 aa9.14□□□□□ -0.95
PNKP-228ENST00000637325 XGP55808 180 aa9.14□□□□□ -0.95
PNKP-228ENST00000637325 GAGE6Q13070 117 aa9.14□□□□□ -0.95
PNKP-228ENST00000637325 ATRAIDQ6UW56 229 aa9.14□□□□□ -0.95
PNKP-228ENST00000637325 NTM-AS1Q6ZSK4 140 aa9.14□□□□□ -0.95
PNKP-228ENST00000637325 SMIM7Q9BQ49 75 aa9.14□□□□□ -0.95
PNKP-228ENST00000637325 C1orf43Q9BWL3 253 aa9.14□□□□□ -0.95
PNKP-228ENST00000637325 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.13□□□□□ -0.95
PNKP-228ENST00000637325 A8MWL6 223 aa9.13□□□□□ -0.95
PNKP-228ENST00000637325 FAM231DQ6ZW35 169 aa9.13□□□□□ -0.95
PNKP-228ENST00000637325 Q8N976 141 aa9.13□□□□□ -0.95
PNKP-228ENST00000637325 FAM210AQ96ND0 272 aa9.13□□□□□ -0.95
PNKP-228ENST00000637325 CNFNQ9BYD5 112 aa9.13□□□□□ -0.95
PNKP-228ENST00000637325 NIT2Q9NQR4 276 aa9.13□□□□□ -0.95
PNKP-228ENST00000637325 DNAH8Q96JB1 4490 aa9.12□□□□□ -0.95
PNKP-228ENST00000637325 ZNF727A8MUV8 499 aa9.12□□□□□ -0.95
PNKP-228ENST00000637325 EPM2AB3EWF7 344 aa9.12□□□□□ -0.95
PNKP-228ENST00000637325 NDUFS6O75380 124 aaKnown RBP9.12□□□□□ -0.95
PNKP-228ENST00000637325 IQCJQ1A5X6 159 aa9.12□□□□□ -0.95
PNKP-228ENST00000637325 ENHOQ6UWT2 76 aa9.12□□□□□ -0.95
PNKP-228ENST00000637325 GTSF1Q8WW33 167 aa9.12□□□□□ -0.95
PNKP-228ENST00000637325 BORCS7Q96B45 105 aa9.12□□□□□ -0.95
PNKP-228ENST00000637325 PGLYRP4Q96LB8 373 aa9.12□□□□□ -0.95
PNKP-228ENST00000637325 SRP19P09132 144 aaKnown RBP9.11□□□□□ -0.95
PNKP-228ENST00000637325 RBX1P62877 108 aa9.11□□□□□ -0.95
PNKP-228ENST00000637325 TMEM243Q9BU79 118 aa9.11□□□□□ -0.95
PNKP-228ENST00000637325 TMEM70Q9BUB7 260 aa9.11□□□□□ -0.95
PNKP-228ENST00000637325 MIAQ16674 131 aa9.1□□□□□ -0.95
PNKP-228ENST00000637325 CT83Q5H943 113 aa9.1□□□□□ -0.95
PNKP-228ENST00000637325 FRZBQ92765 325 aa9.1□□□□□ -0.95
PNKP-228ENST00000637325 TRAV26-2A0A0B4J265 109 aa9.09□□□□□ -0.95
PNKP-228ENST00000637325 UBE2L6O14933 153 aa9.09□□□□□ -0.95
PNKP-228ENST00000637325 COTL1Q14019 142 aa9.09□□□□□ -0.95
PNKP-228ENST00000637325 C14orf177Q52M58 125 aa9.09□□□□□ -0.95
PNKP-228ENST00000637325 CLPSL2Q6UWE3 100 aa9.09□□□□□ -0.95
PNKP-228ENST00000637325 LINC01551Q86U37 167 aa9.09□□□□□ -0.95
PNKP-228ENST00000637325 LINC00269Q8N2A0 174 aa9.09□□□□□ -0.95
PNKP-228ENST00000637325 GATD1Q8NB37 220 aa9.09□□□□□ -0.95
PNKP-228ENST00000637325 DEFB104AQ8WTQ1 72 aa9.09□□□□□ -0.95
PNKP-228ENST00000637325 HLA-DQA1P01909 254 aa9.08□□□□□ -0.96
PNKP-228ENST00000637325 AMTP48728 403 aa9.08□□□□□ -0.96
PNKP-228ENST00000637325 FOXA3P55318 350 aaPredicted RBP9.08□□□□□ -0.96
PNKP-228ENST00000637325 HAMPP81172 84 aa9.08□□□□□ -0.96
PNKP-228ENST00000637325 TEX261Q6UWH6 196 aa9.08□□□□□ -0.96
PNKP-228ENST00000637325 OSTCQ9NRP0 149 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms