RNA–Protein interactions for RNA: ENST00000629570.1

LINC00550-202, long intergenic non-protein coding RNA 550, humanhuman

TSL 3

Gene LINC00550, Length 317 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-202ENST00000629570 GAGE1Q13065 139 aa3.8□□□□□ -1.8
LINC00550-202ENST00000629570 GAGE4Q13068 117 aa3.8□□□□□ -1.8
LINC00550-202ENST00000629570 GAGE5Q13069 117 aa3.8□□□□□ -1.8
LINC00550-202ENST00000629570 ZNF56Q15929 161 aa3.8□□□□□ -1.8
LINC00550-202ENST00000629570 GAGE13Q4V321 117 aa3.8□□□□□ -1.8
LINC00550-202ENST00000629570 CT83Q5H943 113 aa3.8□□□□□ -1.8
LINC00550-202ENST00000629570 LYPD5Q6UWN5 251 aa3.8□□□□□ -1.8
LINC00550-202ENST00000629570 Q6ZR54 194 aa3.8□□□□□ -1.8
LINC00550-202ENST00000629570 PGLYRP4Q96LB8 373 aa3.8□□□□□ -1.8
LINC00550-202ENST00000629570 UPK3BQ9BT76 320 aa3.8□□□□□ -1.8
LINC00550-202ENST00000629570 CNFNQ9BYD5 112 aa3.8□□□□□ -1.8
LINC00550-202ENST00000629570 KRTAP1-5Q9BYS1 174 aa3.8□□□□□ -1.8
LINC00550-202ENST00000629570 OSTCQ9NRP0 149 aa3.8□□□□□ -1.8
LINC00550-202ENST00000629570 V9GYV3 84 aa3.8□□□□□ -1.8
LINC00550-202ENST00000629570 NBDYA0A0U1RRE5 68 aa3.79□□□□□ -1.8
LINC00550-202ENST00000629570 HIGD1CA8MV81 97 aa3.79□□□□□ -1.8
LINC00550-202ENST00000629570 F5H697 171 aa3.79□□□□□ -1.8
LINC00550-202ENST00000629570 MGPP08493 103 aa3.79□□□□□ -1.8
LINC00550-202ENST00000629570 SMIM17P0DL12 118 aa3.79□□□□□ -1.8
LINC00550-202ENST00000629570 ADCYAP1P18509 176 aa3.79□□□□□ -1.8
LINC00550-202ENST00000629570 FOXA3P55318 350 aaPredicted RBP3.79□□□□□ -1.8
LINC00550-202ENST00000629570 TWIST1Q15672 202 aa3.79□□□□□ -1.8
LINC00550-202ENST00000629570 WFDC10BQ8IUB3 73 aa3.79□□□□□ -1.8
LINC00550-202ENST00000629570 C15orf54Q8N8G6 183 aa3.79□□□□□ -1.8
LINC00550-202ENST00000629570 NEXN-AS1Q8NBZ9 246 aa3.79□□□□□ -1.8
LINC00550-202ENST00000629570 TSKUQ8WUA8 353 aa3.79□□□□□ -1.8
LINC00550-202ENST00000629570 Q9H8V8 135 aa3.79□□□□□ -1.8
LINC00550-202ENST00000629570 TRBV10-1A0A0K0K1A3 114 aa3.78□□□□□ -1.8
LINC00550-202ENST00000629570 M0QY20 66 aa3.78□□□□□ -1.8
LINC00550-202ENST00000629570 RTL8CO15255 209 aa3.78□□□□□ -1.8
LINC00550-202ENST00000629570 SIVA1O15304 175 aa3.78□□□□□ -1.8
LINC00550-202ENST00000629570 TRGC1P0CF51 173 aa3.78□□□□□ -1.8
LINC00550-202ENST00000629570 TIRAPP58753 221 aa3.78□□□□□ -1.8
LINC00550-202ENST00000629570 RAB4BP61018 213 aa3.78□□□□□ -1.8
LINC00550-202ENST00000629570 SUMO4Q6EEV6 95 aa3.78□□□□□ -1.8
LINC00550-202ENST00000629570 WDR73Q6P4I2 378 aa3.78□□□□□ -1.8
LINC00550-202ENST00000629570 SH2D6Q7Z4S9 175 aa3.78□□□□□ -1.8
LINC00550-202ENST00000629570 COMMD7Q86VX2 200 aa3.78□□□□□ -1.8
LINC00550-202ENST00000629570 OR10G8Q8NGN5 311 aa3.78□□□□□ -1.8
LINC00550-202ENST00000629570 ATP6V0E2Q8NHE4 81 aa3.78□□□□□ -1.8
LINC00550-202ENST00000629570 GFRA4Q9GZZ7 299 aa3.78□□□□□ -1.8
LINC00550-202ENST00000629570 GTSF1LQ9H1H1 148 aa3.78□□□□□ -1.8
LINC00550-202ENST00000629570 DPH3P1Q9H4G8 78 aa3.78□□□□□ -1.8
LINC00550-202ENST00000629570 FRAS1Q86XX4 4008 aa3.78□□□□□ -1.8
LINC00550-202ENST00000629570 DNAH10Q8IVF4 4471 aa3.78□□□□□ -1.81
LINC00550-202ENST00000629570 TRBV7-3A0A075B6L6 115 aa3.77□□□□□ -1.81
LINC00550-202ENST00000629570 TRAV26-2A0A0B4J265 109 aa3.77□□□□□ -1.81
LINC00550-202ENST00000629570 IGHV3-38A0A0C4DH36 116 aa3.77□□□□□ -1.81
LINC00550-202ENST00000629570 A0A1B0GUT8 65 aa3.77□□□□□ -1.81
LINC00550-202ENST00000629570 SMIM27A0A1W2PRY6 76 aa3.77□□□□□ -1.81
LINC00550-202ENST00000629570 TMEM218A2RU14 115 aa3.77□□□□□ -1.81
LINC00550-202ENST00000629570 FAM231BA6NCW3 169 aa3.77□□□□□ -1.81
LINC00550-202ENST00000629570 DNAH10OSP0CZ25 163 aa3.77□□□□□ -1.81
LINC00550-202ENST00000629570 UBE2D3P61077 147 aa3.77□□□□□ -1.81
LINC00550-202ENST00000629570 UBE2D2P62837 147 aa3.77□□□□□ -1.81
LINC00550-202ENST00000629570 RPL36AP83881 106 aaKnown RBP3.77□□□□□ -1.81
LINC00550-202ENST00000629570 TTC32Q5I0X7 151 aa3.77□□□□□ -1.81
LINC00550-202ENST00000629570 OR10J3Q5JRS4 329 aa3.77□□□□□ -1.81
LINC00550-202ENST00000629570 LELP1Q5T871 98 aa3.77□□□□□ -1.81
LINC00550-202ENST00000629570 UQCC3Q6UW78 93 aa3.77□□□□□ -1.81
LINC00550-202ENST00000629570 NUP35Q8NFH5 326 aa3.77□□□□□ -1.81
LINC00550-202ENST00000629570 RPL36ALQ969Q0 106 aaKnown RBP3.77□□□□□ -1.81
LINC00550-202ENST00000629570 NAT8BQ9UHF3 227 aa3.77□□□□□ -1.81
LINC00550-202ENST00000629570 DNAH2Q9P225 4427 aa3.77□□□□□ -1.81
LINC00550-202ENST00000629570 TRAV8-6A0A0B4J262 113 aa3.76□□□□□ -1.81
LINC00550-202ENST00000629570 LINC00862A6NCI5 91 aa3.76□□□□□ -1.81
LINC00550-202ENST00000629570 GAS8-AS1O95177 125 aa3.76□□□□□ -1.81
LINC00550-202ENST00000629570 PNRC1Q12796 327 aaPredicted RBP3.76□□□□□ -1.81
LINC00550-202ENST00000629570 C1orf134Q5TEV5 83 aa3.76□□□□□ -1.81
LINC00550-202ENST00000629570 RASL11AQ6T310 242 aa3.76□□□□□ -1.81
LINC00550-202ENST00000629570 GATD1Q8NB37 220 aa3.76□□□□□ -1.81
LINC00550-202ENST00000629570 BORCS7Q96B45 105 aa3.76□□□□□ -1.81
LINC00550-202ENST00000629570 BIRC6Q9NR09 4857 aa3.75□□□□□ -1.81
LINC00550-202ENST00000629570 A0A087WWC5 75 aa3.75□□□□□ -1.81
LINC00550-202ENST00000629570 F8W036 122 aa3.75□□□□□ -1.81
LINC00550-202ENST00000629570 H7C1H1 209 aa3.75□□□□□ -1.81
LINC00550-202ENST00000629570 IGHV3-30P01768 117 aa3.75□□□□□ -1.81
LINC00550-202ENST00000629570 IGHV3-33P01772 117 aa3.75□□□□□ -1.81
LINC00550-202ENST00000629570 IGHV3-30-3P0DP02 117 aa3.75□□□□□ -1.81
LINC00550-202ENST00000629570 IGHV3-30-5P0DP03 117 aa3.75□□□□□ -1.81
LINC00550-202ENST00000629570 RPS10P46783 165 aaKnown RBP3.75□□□□□ -1.81
LINC00550-202ENST00000629570 RIGQ13278 110 aa3.75□□□□□ -1.81
LINC00550-202ENST00000629570 LINC01556Q5JQF7 62 aa3.75□□□□□ -1.81
LINC00550-202ENST00000629570 MRPL54Q6P161 138 aaKnown RBP3.75□□□□□ -1.81
LINC00550-202ENST00000629570 NTM-AS1Q6ZSK4 140 aa3.75□□□□□ -1.81
LINC00550-202ENST00000629570 SMIM15Q7Z3B0 74 aa3.75□□□□□ -1.81
LINC00550-202ENST00000629570 AMN1Q8IY45 258 aa3.75□□□□□ -1.81
LINC00550-202ENST00000629570 C6orf223Q8N319 242 aa3.75□□□□□ -1.81
LINC00550-202ENST00000629570 DEFB104AQ8WTQ1 72 aa3.75□□□□□ -1.81
LINC00550-202ENST00000629570 RPL39LQ96EH5 51 aaKnown RBP3.75□□□□□ -1.81
LINC00550-202ENST00000629570 RNF185Q96GF1 192 aa3.75□□□□□ -1.81
LINC00550-202ENST00000629570 TMEM191AQ9H0A3 160 aa3.75□□□□□ -1.81
LINC00550-202ENST00000629570 TNFRSF18Q9Y5U5 241 aa3.75□□□□□ -1.81
LINC00550-202ENST00000629570 HECTD4Q9Y4D8 3996 aa3.75□□□□□ -1.81
LINC00550-202ENST00000629570 FAT2Q9NYQ8 4349 aa3.75□□□□□ -1.81
LINC00550-202ENST00000629570 TRBV6-8A0A0A6YYG3 113 aa3.74□□□□□ -1.81
LINC00550-202ENST00000629570 A0A1B0GXF2 115 aa3.74□□□□□ -1.81
LINC00550-202ENST00000629570 PRSS29PA6NIE9 313 aa3.74□□□□□ -1.81
LINC00550-202ENST00000629570 SMKR1H3BMG3 65 aa3.74□□□□□ -1.81
LINC00550-202ENST00000629570 PPP1R2P9O14990 202 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms