RNA–Protein interactions for RNA: ENST00000625810.2

ATG4B-226, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4 BASIC

Gene ATG4B, Length 370 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-226ENST00000625810 C1orf43Q9BWL3 253 aa12.6□□□□□ -0.39
ATG4B-226ENST00000625810 GNG13Q9P2W3 67 aa12.6□□□□□ -0.39
ATG4B-226ENST00000625810 ATRAIDQ6UW56 229 aa12.59□□□□□ -0.39
ATG4B-226ENST00000625810 MANBALQ9NQG1 85 aa12.59□□□□□ -0.39
ATG4B-226ENST00000625810 ANGP03950 147 aaKnown RBP12.58□□□□□ -0.4
ATG4B-226ENST00000625810 PKIAP61925 76 aa12.58□□□□□ -0.4
ATG4B-226ENST00000625810 LINC00528Q8N1L1 170 aa12.58□□□□□ -0.4
ATG4B-226ENST00000625810 CCL20P78556 96 aa12.57□□□□□ -0.4
ATG4B-226ENST00000625810 C14orf177Q52M58 125 aa12.57□□□□□ -0.4
ATG4B-226ENST00000625810 MPV17L2Q567V2 206 aa12.57□□□□□ -0.4
ATG4B-226ENST00000625810 TMEM97Q5BJF2 176 aa12.57□□□□□ -0.4
ATG4B-226ENST00000625810 ENHOQ6UWT2 76 aa12.57□□□□□ -0.4
ATG4B-226ENST00000625810 DAZAP1Q96EP5 407 aaKnown RBP12.57□□□□□ -0.4
ATG4B-226ENST00000625810 AP1S3Q96PC3 154 aa12.57□□□□□ -0.4
ATG4B-226ENST00000625810 TEX46H3BTG2 121 aa12.56□□□□□ -0.4
ATG4B-226ENST00000625810 C11orf52Q96A22 123 aa12.56□□□□□ -0.4
ATG4B-226ENST00000625810 DERL1Q9BUN8 251 aa12.56□□□□□ -0.4
ATG4B-226ENST00000625810 TPPP3Q9BW30 176 aa12.56□□□□□ -0.4
ATG4B-226ENST00000625810 RAB5CP51148 216 aa12.55□□□□□ -0.4
ATG4B-226ENST00000625810 CENPWQ5EE01 88 aa12.55□□□□□ -0.4
ATG4B-226ENST00000625810 EIF5AL1Q6IS14 154 aaKnown RBP12.55□□□□□ -0.4
ATG4B-226ENST00000625810 TRAV1-1A0A0B4J248 108 aa12.54□□□□□ -0.4
ATG4B-226ENST00000625810 J3QL48 77 aa12.54□□□□□ -0.4
ATG4B-226ENST00000625810 MGPP08493 103 aa12.54□□□□□ -0.4
ATG4B-226ENST00000625810 GZMBP10144 247 aa12.54□□□□□ -0.4
ATG4B-226ENST00000625810 RPS20P60866 119 aaKnown RBP12.54□□□□□ -0.4
ATG4B-226ENST00000625810 SCXQ7RTU7 201 aa12.54□□□□□ -0.4
ATG4B-226ENST00000625810 FER1L6-AS1Q8NA97 138 aa12.54□□□□□ -0.4
ATG4B-226ENST00000625810 OR2D3Q8NGH3 330 aa12.54□□□□□ -0.4
ATG4B-226ENST00000625810 VAX2Q9UIW0 290 aa12.54□□□□□ -0.4
ATG4B-226ENST00000625810 KIF25-AS1Q9Y6Z4 181 aa12.54□□□□□ -0.4
ATG4B-226ENST00000625810 NTM-AS1Q6ZSK4 140 aa12.53□□□□□ -0.4
ATG4B-226ENST00000625810 TRBV25-1A0A075B6N4 114 aa12.52□□□□□ -0.41
ATG4B-226ENST00000625810 HLA-DQA1P01909 254 aa12.52□□□□□ -0.41
ATG4B-226ENST00000625810 GAGE6Q13070 117 aa12.52□□□□□ -0.41
ATG4B-226ENST00000625810 MIAQ16674 131 aa12.52□□□□□ -0.41
ATG4B-226ENST00000625810 CHAC1Q9BUX1 264 aa12.52□□□□□ -0.41
ATG4B-226ENST00000625810 RAB19A4D1S5 217 aa12.51□□□□□ -0.41
ATG4B-226ENST00000625810 H7C1H1 209 aa12.51□□□□□ -0.41
ATG4B-226ENST00000625810 GNG4P50150 75 aa12.51□□□□□ -0.41
ATG4B-226ENST00000625810 CACNG7P62955 275 aa12.51□□□□□ -0.41
ATG4B-226ENST00000625810 XKRY2A2RUG3 117 aa12.5□□□□□ -0.41
ATG4B-226ENST00000625810 IFNA1P01562 189 aa12.5□□□□□ -0.41
ATG4B-226ENST00000625810 IGLV2-8P01709 118 aa12.5□□□□□ -0.41
ATG4B-226ENST00000625810 IGLC6P0CF74 106 aa12.5□□□□□ -0.41
ATG4B-226ENST00000625810 RBX1P62877 108 aa12.5□□□□□ -0.41
ATG4B-226ENST00000625810 CLPSL2Q6UWE3 100 aa12.5□□□□□ -0.41
ATG4B-226ENST00000625810 DEFB104AQ8WTQ1 72 aa12.5□□□□□ -0.41
ATG4B-226ENST00000625810 MED9Q9NWA0 146 aa12.5□□□□□ -0.41
ATG4B-226ENST00000625810 IGHV1-24A0A0C4DH33 117 aa12.49□□□□□ -0.41
ATG4B-226ENST00000625810 C19orf71A6NCJ1 209 aa12.49□□□□□ -0.41
ATG4B-226ENST00000625810 USP17L23D6RBM5 183 aa12.49□□□□□ -0.41
ATG4B-226ENST00000625810 PDE6DO43924 150 aa12.49□□□□□ -0.41
ATG4B-226ENST00000625810 P01737 135 aa12.49□□□□□ -0.41
ATG4B-226ENST00000625810 SULT1A2P50226 295 aa12.49□□□□□ -0.41
ATG4B-226ENST00000625810 MEF2BQ02080 365 aaPredicted RBP12.49□□□□□ -0.41
ATG4B-226ENST00000625810 LINC00269Q8N2A0 174 aa12.49□□□□□ -0.41
ATG4B-226ENST00000625810 CIRBP-AS1Q8TBR5 109 aa12.49□□□□□ -0.41
ATG4B-226ENST00000625810 SMIM12Q96EX1 92 aa12.49□□□□□ -0.41
ATG4B-226ENST00000625810 BIN3Q9NQY0 253 aa12.49□□□□□ -0.41
ATG4B-226ENST00000625810 F2Z2F3 143 aa12.48□□□□□ -0.41
ATG4B-226ENST00000625810 M0QY20 66 aa12.48□□□□□ -0.41
ATG4B-226ENST00000625810 SUMO4Q6EEV6 95 aa12.48□□□□□ -0.41
ATG4B-226ENST00000625810 TRGC1P0CF51 173 aa12.47□□□□□ -0.41
ATG4B-226ENST00000625810 IQCJQ1A5X6 159 aa12.47□□□□□ -0.41
ATG4B-226ENST00000625810 PRR34Q9NV39 138 aa12.47□□□□□ -0.41
ATG4B-226ENST00000625810 KRTAP29-1A8MX34 341 aaPredicted RBP12.46□□□□□ -0.41
ATG4B-226ENST00000625810 NKX2-5P52952 324 aaPredicted RBP12.46□□□□□ -0.41
ATG4B-226ENST00000625810 LYZL1Q6UWQ5 148 aa12.46□□□□□ -0.41
ATG4B-226ENST00000625810 BCL2P10415 239 aa12.45□□□□□ -0.42
ATG4B-226ENST00000625810 RASL11AQ6T310 242 aa12.45□□□□□ -0.42
ATG4B-226ENST00000625810 PRSS1P07477 247 aa12.44□□□□□ -0.42
ATG4B-226ENST00000625810 NTF3P20783 257 aa12.44□□□□□ -0.42
ATG4B-226ENST00000625810 KRTAP10-4P60372 401 aaPredicted RBP12.44□□□□□ -0.42
ATG4B-226ENST00000625810 DGAT2L7PQ6IED9 249 aa12.44□□□□□ -0.42
ATG4B-226ENST00000625810 TMEM243Q9BU79 118 aa12.44□□□□□ -0.42
ATG4B-226ENST00000625810 DPH3P1Q9H4G8 78 aa12.44□□□□□ -0.42
ATG4B-226ENST00000625810 TRBV20OR9-2A0A075B6H5 130 aa12.43□□□□□ -0.42
ATG4B-226ENST00000625810 REG3AQ06141 175 aa12.43□□□□□ -0.42
ATG4B-226ENST00000625810 SLC51BQ86UW2 128 aa12.43□□□□□ -0.42
ATG4B-226ENST00000625810 NIT2Q9NQR4 276 aa12.43□□□□□ -0.42
ATG4B-226ENST00000625810 LRP1Q07954 4544 aaKnown RBP12.43□□□□□ -0.42
ATG4B-226ENST00000625810 IGLV10-54A0A075B6I4 117 aa12.42□□□□□ -0.42
ATG4B-226ENST00000625810 TCTE3Q8IZS6 198 aa12.42□□□□□ -0.42
ATG4B-226ENST00000625810 NUDT10Q8NFP7 164 aa12.42□□□□□ -0.42
ATG4B-226ENST00000625810 NUDT11Q96G61 164 aa12.42□□□□□ -0.42
ATG4B-226ENST00000625810 TAGLN2P37802 199 aaKnown RBP12.41□□□□□ -0.42
ATG4B-226ENST00000625810 KRTAP26-1Q6PEX3 210 aa12.41□□□□□ -0.42
ATG4B-226ENST00000625810 C9orf62Q8N4C0 152 aa12.41□□□□□ -0.42
ATG4B-226ENST00000625810 TRAV8-4A0A0B4J246 113 aa12.4□□□□□ -0.42
ATG4B-226ENST00000625810 UBE2L6O14933 153 aa12.4□□□□□ -0.42
ATG4B-226ENST00000625810 TWIST1Q15672 202 aa12.4□□□□□ -0.42
ATG4B-226ENST00000625810 WDR73Q6P4I2 378 aa12.4□□□□□ -0.42
ATG4B-226ENST00000625810 C9orf163Q8N9P6 203 aa12.4□□□□□ -0.42
ATG4B-226ENST00000625810 C20orf203Q8NBC4 194 aa12.4□□□□□ -0.42
ATG4B-226ENST00000625810 CLRN3Q8NCR9 226 aa12.4□□□□□ -0.42
ATG4B-226ENST00000625810 A0A1B0GUV1 79 aa12.39□□□□□ -0.43
ATG4B-226ENST00000625810 COTL1Q14019 142 aa12.39□□□□□ -0.43
ATG4B-226ENST00000625810 PGLYRP4Q96LB8 373 aa12.39□□□□□ -0.43
ATG4B-226ENST00000625810 IGLV4-60A0A075B6I1 120 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms