RNA–Protein interactions for RNA: ENST00000624700.3

CDKL5-207, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-207ENST00000624700 C3orf62Q6ZUJ4 267 aa0.41□□□□□ -2.34
CDKL5-207ENST00000624700 CLEC2BQ92478 149 aa0.41□□□□□ -2.34
CDKL5-207ENST00000624700 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.41□□□□□ -2.34
CDKL5-207ENST00000624700 ABCA1O95477 2261 aa0.41□□□□□ -2.34
CDKL5-207ENST00000624700 AFDNP55196 1824 aaKnown RBP0.41□□□□□ -2.34
CDKL5-207ENST00000624700 ABCA8O94911 1581 aa0.4□□□□□ -2.34
CDKL5-207ENST00000624700 GLI2P10070 1586 aa0.4□□□□□ -2.34
CDKL5-207ENST00000624700 MAST1Q9Y2H9 1570 aa0.4□□□□□ -2.34
CDKL5-207ENST00000624700 CRYBA4P53673 196 aa0.4□□□□□ -2.35
CDKL5-207ENST00000624700 LSM3P62310 102 aaKnown RBP0.4□□□□□ -2.35
CDKL5-207ENST00000624700 STX12Q86Y82 276 aa0.4□□□□□ -2.35
CDKL5-207ENST00000624700 TCTEX1D1Q8N7M0 179 aa0.4□□□□□ -2.35
CDKL5-207ENST00000624700 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.4□□□□□ -2.35
CDKL5-207ENST00000624700 CARD19Q96LW7 228 aa0.4□□□□□ -2.35
CDKL5-207ENST00000624700 FAM103A1Q9BTL3 118 aaKnown RBP0.4□□□□□ -2.35
CDKL5-207ENST00000624700 ANKRD26Q9UPS8 1709 aa0.4□□□□□ -2.35
CDKL5-207ENST00000624700 LXNQ9BS40 222 aa0.39□□□□□ -2.35
CDKL5-207ENST00000624700 C19orf12Q9NSK7 152 aa0.39□□□□□ -2.35
CDKL5-207ENST00000624700 LYSTQ99698 3801 aa0.39□□□□□ -2.35
CDKL5-207ENST00000624700 A0A0G2JMZ2 1700 aa0.38□□□□□ -2.35
CDKL5-207ENST00000624700 TSC2P49815 1807 aa0.38□□□□□ -2.35
CDKL5-207ENST00000624700 TNCP24821 2201 aa0.38□□□□□ -2.35
CDKL5-207ENST00000624700 COL14A1Q05707 1796 aaKnown RBP0.38□□□□□ -2.35
CDKL5-207ENST00000624700 C3P01024 1663 aa0.38□□□□□ -2.35
CDKL5-207ENST00000624700 DNAH5Q8TE73 4624 aa0.38□□□□□ -2.35
CDKL5-207ENST00000624700 C1orf167Q5SNV9 1468 aa0.38□□□□□ -2.35
CDKL5-207ENST00000624700 TRBV7-6A0A0J9YX20 115 aa0.38□□□□□ -2.35
CDKL5-207ENST00000624700 TRBV27A0A0K0K1C4 114 aa0.38□□□□□ -2.35
CDKL5-207ENST00000624700 A0A1W2PPB8 328 aa0.38□□□□□ -2.35
CDKL5-207ENST00000624700 A0A1W2PRS3 328 aa0.38□□□□□ -2.35
CDKL5-207ENST00000624700 KIR3DP1A8MWS1 328 aa0.38□□□□□ -2.35
CDKL5-207ENST00000624700 PGRMC1O00264 195 aaKnown RBP0.38□□□□□ -2.35
CDKL5-207ENST00000624700 EVI2AP22794 236 aa0.38□□□□□ -2.35
CDKL5-207ENST00000624700 S100A11P31949 105 aa0.38□□□□□ -2.35
CDKL5-207ENST00000624700 SNRPD3P62318 126 aaKnown RBP0.38□□□□□ -2.35
CDKL5-207ENST00000624700 PCBD2Q9H0N5 130 aa0.38□□□□□ -2.35
CDKL5-207ENST00000624700 TAF9BQ9HBM6 251 aa0.38□□□□□ -2.35
CDKL5-207ENST00000624700 MRPL35Q9NZE8 188 aaKnown RBP0.38□□□□□ -2.35
CDKL5-207ENST00000624700 MPC1Q9Y5U8 109 aa0.38□□□□□ -2.35
CDKL5-207ENST00000624700 SYNE1Q8NF91 8797 aaKnown RBP0.38□□□□□ -2.35
CDKL5-207ENST00000624700 DSPPQ9NZW4 1301 aa0.38□□□□□ -2.35
CDKL5-207ENST00000624700 ZNF831Q5JPB2 1677 aa0.37□□□□□ -2.35
CDKL5-207ENST00000624700 ITSN2Q9NZM3 1697 aa0.37□□□□□ -2.35
CDKL5-207ENST00000624700 IFITM5A6NNB3 132 aa0.37□□□□□ -2.35
CDKL5-207ENST00000624700 H7BYZ3 331 aa0.37□□□□□ -2.35
CDKL5-207ENST00000624700 LINC00305Q7Z4B0 112 aa0.37□□□□□ -2.35
CDKL5-207ENST00000624700 TMEM229BQ8NBD8 167 aa0.37□□□□□ -2.35
CDKL5-207ENST00000624700 URB1O60287 2271 aaKnown RBP0.37□□□□□ -2.35
CDKL5-207ENST00000624700 ABCA6Q8N139 1617 aa0.37□□□□□ -2.35
CDKL5-207ENST00000624700 CACNA1CQ13936 2221 aa0.37□□□□□ -2.35
CDKL5-207ENST00000624700 ADGRL2O95490 1459 aa0.36□□□□□ -2.35
CDKL5-207ENST00000624700 LRRC9Q6ZRR7 1453 aa0.36□□□□□ -2.35
CDKL5-207ENST00000624700 APOBP04114 4563 aaKnown RBP0.36□□□□□ -2.35
CDKL5-207ENST00000624700 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.36□□□□□ -2.35
CDKL5-207ENST00000624700 TRAV13-1A0A0B4J241 112 aa0.36□□□□□ -2.35
CDKL5-207ENST00000624700 ETV6P41212 452 aa0.36□□□□□ -2.35
CDKL5-207ENST00000624700 MORN4Q8NDC4 146 aa0.36□□□□□ -2.35
CDKL5-207ENST00000624700 OR8J3Q8NGG0 315 aa0.36□□□□□ -2.35
CDKL5-207ENST00000624700 V9GYQ6 96 aa0.36□□□□□ -2.35
CDKL5-207ENST00000624700 PBRM1Q86U86 1689 aa0.36□□□□□ -2.35
CDKL5-207ENST00000624700 MAP2P11137 1827 aaKnown RBP0.36□□□□□ -2.35
CDKL5-207ENST00000624700 HUWE1Q7Z6Z7 4374 aaKnown RBP0.36□□□□□ -2.35
CDKL5-207ENST00000624700 MAGI1Q96QZ7 1491 aaPredicted RBP0.35□□□□□ -2.35
CDKL5-207ENST00000624700 DUOX2Q9NRD8 1548 aa0.35□□□□□ -2.35
CDKL5-207ENST00000624700 UGGT2Q9NYU1 1516 aa0.35□□□□□ -2.35
CDKL5-207ENST00000624700 IGF2P01344 180 aa0.35□□□□□ -2.35
CDKL5-207ENST00000624700 GNG10P50151 68 aa0.35□□□□□ -2.35
CDKL5-207ENST00000624700 CENPHQ9H3R5 247 aa0.35□□□□□ -2.35
CDKL5-207ENST00000624700 MED31Q9Y3C7 131 aa0.35□□□□□ -2.35
CDKL5-207ENST00000624700 SMG6Q86US8 1419 aaKnown RBP0.35□□□□□ -2.35
CDKL5-207ENST00000624700 EIF4G3O43432 1585 aaKnown RBP0.35□□□□□ -2.35
CDKL5-207ENST00000624700 SUPT6HQ7KZ85 1726 aaKnown RBP0.35□□□□□ -2.35
CDKL5-207ENST00000624700 NKTRP30414 1462 aaKnown RBP0.35□□□□□ -2.35
CDKL5-207ENST00000624700 MYO7AQ13402 2215 aa0.34□□□□□ -2.35
CDKL5-207ENST00000624700 PLCH1Q4KWH8 1693 aa0.34□□□□□ -2.35
CDKL5-207ENST00000624700 A0A1W2PRE2 83 aa0.34□□□□□ -2.36
CDKL5-207ENST00000624700 G0S2P27469 103 aa0.34□□□□□ -2.36
CDKL5-207ENST00000624700 GLYATL3Q5SZD4 288 aa0.34□□□□□ -2.36
CDKL5-207ENST00000624700 TOMM20LQ6UXN7 152 aa0.34□□□□□ -2.36
CDKL5-207ENST00000624700 THEM6Q8WUY1 208 aa0.34□□□□□ -2.36
CDKL5-207ENST00000624700 LPAP08519 4548 aa0.34□□□□□ -2.36
CDKL5-207ENST00000624700 ERVK-7P63135 1459 aa0.34□□□□□ -2.36
CDKL5-207ENST00000624700 ESPL1Q14674 2120 aa0.34□□□□□ -2.36
CDKL5-207ENST00000624700 DNAH6Q9C0G6 4158 aa0.34□□□□□ -2.36
CDKL5-207ENST00000624700 ARHGEF12Q9NZN5 1544 aa0.33□□□□□ -2.36
CDKL5-207ENST00000624700 DNAH10Q8IVF4 4471 aa0.33□□□□□ -2.36
CDKL5-207ENST00000624700 RGPD8O14715 1765 aaPredicted RBP0.33□□□□□ -2.36
CDKL5-207ENST00000624700 RGPD5Q99666 1765 aa0.33□□□□□ -2.36
CDKL5-207ENST00000624700 DLEC1Q9Y238 1755 aa0.33□□□□□ -2.36
CDKL5-207ENST00000624700 A0A1B0GV72 72 aa0.33□□□□□ -2.36
CDKL5-207ENST00000624700 HIGD1CA8MV81 97 aa0.33□□□□□ -2.36
CDKL5-207ENST00000624700 RPL37P61927 97 aaKnown RBP0.33□□□□□ -2.36
CDKL5-207ENST00000624700 PPP1R2P3Q6NXS1 205 aa0.33□□□□□ -2.36
CDKL5-207ENST00000624700 NABP2Q9BQ15 211 aa0.33□□□□□ -2.36
CDKL5-207ENST00000624700 WDR97A6NE52 1622 aa0.33□□□□□ -2.36
CDKL5-207ENST00000624700 FANCAO15360 1455 aa0.33□□□□□ -2.36
CDKL5-207ENST00000624700 SPAG17Q6Q759 2223 aa0.33□□□□□ -2.36
CDKL5-207ENST00000624700 AKAP11Q9UKA4 1901 aa0.32□□□□□ -2.36
CDKL5-207ENST00000624700 H3BMG7 143 aa0.32□□□□□ -2.36
CDKL5-207ENST00000624700 EDF1O60869 148 aaKnown RBP0.32□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms