RNA–Protein interactions for RNA: ENST00000623466.1

PCDHB17P-202, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 3,066 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-202ENST00000623466 IGHV4-59P01825 116 aa10.09□□□□□ -0.79
PCDHB17P-202ENST00000623466 SCGB1C2P0DMR2 95 aa10.09□□□□□ -0.79
PCDHB17P-202ENST00000623466 S100A4P26447 101 aaKnown RBP10.09□□□□□ -0.79
PCDHB17P-202ENST00000623466 SRSF9Q13242 221 aaKnown RBP eCLIP10.09□□□□□ -0.79
PCDHB17P-202ENST00000623466 C15orf53Q8NAA6 179 aa10.09□□□□□ -0.79
PCDHB17P-202ENST00000623466 LGALS1P09382 135 aaKnown RBP10.09□□□□□ -0.79
PCDHB17P-202ENST00000623466 SUMO2P61956 95 aaKnown RBP10.09□□□□□ -0.79
PCDHB17P-202ENST00000623466 PLEKHB2Q96CS7 222 aa10.09□□□□□ -0.79
PCDHB17P-202ENST00000623466 PRADC1Q9BSG0 188 aa10.09□□□□□ -0.79
PCDHB17P-202ENST00000623466 OR10J6PQ8NGY7 276 aa10.08□□□□□ -0.8
PCDHB17P-202ENST00000623466 HIST2H2BCQ6DN03 193 aa10.08□□□□□ -0.8
PCDHB17P-202ENST00000623466 SCGB1D4Q6XE38 83 aa10.08□□□□□ -0.8
PCDHB17P-202ENST00000623466 ASIPP42127 132 aa10.08□□□□□ -0.8
PCDHB17P-202ENST00000623466 C2orf66Q6UXQ4 117 aa10.08□□□□□ -0.8
PCDHB17P-202ENST00000623466 C9orf47Q6ZRZ4 202 aa10.08□□□□□ -0.8
PCDHB17P-202ENST00000623466 ZNF815PA8K554 130 aa10.07□□□□□ -0.8
PCDHB17P-202ENST00000623466 RNF223E7ERA6 249 aa10.07□□□□□ -0.8
PCDHB17P-202ENST00000623466 SLC25A16P16260 332 aa10.07□□□□□ -0.8
PCDHB17P-202ENST00000623466 GNRH2O43555 120 aa10.07□□□□□ -0.8
PCDHB17P-202ENST00000623466 DEFB112Q30KQ8 113 aa10.07□□□□□ -0.8
PCDHB17P-202ENST00000623466 NEXN-AS1Q8NBZ9 246 aa10.07□□□□□ -0.8
PCDHB17P-202ENST00000623466 BAALCQ8WXS3 180 aa10.07□□□□□ -0.8
PCDHB17P-202ENST00000623466 DNAJC30Q96LL9 226 aa10.07□□□□□ -0.8
PCDHB17P-202ENST00000623466 LINC01587Q99440 93 aa10.07□□□□□ -0.8
PCDHB17P-202ENST00000623466 SPANXA1Q9NS26 97 aa10.07□□□□□ -0.8
PCDHB17P-202ENST00000623466 PHLDA3Q9Y5J5 127 aa10.07□□□□□ -0.8
PCDHB17P-202ENST00000623466 MUC4Q99102 2169 aa10.07□□□□□ -0.8
PCDHB17P-202ENST00000623466 TRBV7-1A0A0A6YYK4 115 aa10.06□□□□□ -0.8
PCDHB17P-202ENST00000623466 C9JAW5 83 aa10.06□□□□□ -0.8
PCDHB17P-202ENST00000623466 LYRM7Q5U5X0 104 aa10.06□□□□□ -0.8
PCDHB17P-202ENST00000623466 FAM19A5Q7Z5A7 132 aaPredicted RBP10.06□□□□□ -0.8
PCDHB17P-202ENST00000623466 TOMM6Q96B49 74 aa10.06□□□□□ -0.8
PCDHB17P-202ENST00000623466 MDFICQ9P1T7 246 aa10.06□□□□□ -0.8
PCDHB17P-202ENST00000623466 UBR5O95071 2799 aaPredicted RBP10.06□□□□□ -0.8
PCDHB17P-202ENST00000623466 SLC25A20O43772 301 aa10.05□□□□□ -0.8
PCDHB17P-202ENST00000623466 RNASE4P34096 147 aaKnown RBP10.05□□□□□ -0.8
PCDHB17P-202ENST00000623466 UBE2D3P61077 147 aa10.05□□□□□ -0.8
PCDHB17P-202ENST00000623466 UBE2D2P62837 147 aa10.05□□□□□ -0.8
PCDHB17P-202ENST00000623466 TRAV12-1A0A0B4J245 112 aa10.05□□□□□ -0.8
PCDHB17P-202ENST00000623466 DUSP14O95147 198 aaKnown RBP10.05□□□□□ -0.8
PCDHB17P-202ENST00000623466 ORMDL2Q53FV1 153 aa10.05□□□□□ -0.8
PCDHB17P-202ENST00000623466 Q6Q795 121 aa10.05□□□□□ -0.8
PCDHB17P-202ENST00000623466 IGHV4-4A0A075B6R2 117 aa10.05□□□□□ -0.8
PCDHB17P-202ENST00000623466 FLNAP21333 2647 aaKnown RBP10.05□□□□□ -0.8
PCDHB17P-202ENST00000623466 A6NDX4 124 aa10.04□□□□□ -0.8
PCDHB17P-202ENST00000623466 B4DSR2 109 aa10.04□□□□□ -0.8
PCDHB17P-202ENST00000623466 ZFAND2AQ8N6M9 145 aa10.04□□□□□ -0.8
PCDHB17P-202ENST00000623466 NTN5Q8WTR8 489 aaPredicted RBP10.04□□□□□ -0.8
PCDHB17P-202ENST00000623466 CRIP2P52943 208 aaPredicted RBP10.04□□□□□ -0.8
PCDHB17P-202ENST00000623466 JPT2Q9H910 190 aa10.04□□□□□ -0.8
PCDHB17P-202ENST00000623466 ITPR2Q14571 2701 aa10.04□□□□□ -0.8
PCDHB17P-202ENST00000623466 ITPR3Q14573 2671 aa10.04□□□□□ -0.8
PCDHB17P-202ENST00000623466 ODF3Q96PU9 254 aa10.03□□□□□ -0.8
PCDHB17P-202ENST00000623466 DPH3P1Q9H4G8 78 aa10.03□□□□□ -0.8
PCDHB17P-202ENST00000623466 NIPBLQ6KC79 2804 aaeCLIP10.03□□□□□ -0.8
PCDHB17P-202ENST00000623466 TRAV8-4A0A0B4J246 113 aa10.03□□□□□ -0.8
PCDHB17P-202ENST00000623466 PLA2G2AP14555 144 aa10.03□□□□□ -0.8
PCDHB17P-202ENST00000623466 HELZ2Q9BYK8 2649 aaKnown RBP10.03□□□□□ -0.8
PCDHB17P-202ENST00000623466 IGHG2P01859 326 aa10.03□□□□□ -0.8
PCDHB17P-202ENST00000623466 GPHB5Q86YW7 130 aa10.03□□□□□ -0.8
PCDHB17P-202ENST00000623466 SBSPONQ8IVN8 264 aa10.03□□□□□ -0.8
PCDHB17P-202ENST00000623466 BEX4Q9NWD9 120 aaPredicted RBP10.03□□□□□ -0.8
PCDHB17P-202ENST00000623466 IGKV3-20P01619 116 aa10.02□□□□□ -0.81
PCDHB17P-202ENST00000623466 RPL39P62891 51 aaKnown RBP10.02□□□□□ -0.81
PCDHB17P-202ENST00000623466 C19orf54Q5BKX5 351 aa10.02□□□□□ -0.81
PCDHB17P-202ENST00000623466 TRPT1Q86TN4 253 aaKnown RBP10.02□□□□□ -0.81
PCDHB17P-202ENST00000623466 Q8N1Y9 231 aa10.02□□□□□ -0.81
PCDHB17P-202ENST00000623466 EDA2RQ9HAV5 297 aa10.02□□□□□ -0.81
PCDHB17P-202ENST00000623466 KLK5Q9Y337 293 aaPredicted RBP10.02□□□□□ -0.81
PCDHB17P-202ENST00000623466 TRAV2A0A0B4J234 112 aa10.02□□□□□ -0.81
PCDHB17P-202ENST00000623466 C11orf86A6NJI1 115 aa10.02□□□□□ -0.81
PCDHB17P-202ENST00000623466 J3QKU1 62 aa10.02□□□□□ -0.81
PCDHB17P-202ENST00000623466 U3KQE9 123 aa10.02□□□□□ -0.81
PCDHB17P-202ENST00000623466 CRYGDP07320 174 aa10.01□□□□□ -0.81
PCDHB17P-202ENST00000623466 COX6B1P14854 86 aa10.01□□□□□ -0.81
PCDHB17P-202ENST00000623466 TENM4Q6N022 2769 aa10.01□□□□□ -0.81
PCDHB17P-202ENST00000623466 TRAV21A0A0B4J279 112 aa10.01□□□□□ -0.81
PCDHB17P-202ENST00000623466 C9orf153Q5TBE3 101 aa10.01□□□□□ -0.81
PCDHB17P-202ENST00000623466 RHPN1-AS1Q9BWJ2 59 aa10.01□□□□□ -0.81
PCDHB17P-202ENST00000623466 A0A087WWL8 130 aa10.01□□□□□ -0.81
PCDHB17P-202ENST00000623466 TEX49A0A1B0GTD5 131 aa10.01□□□□□ -0.81
PCDHB17P-202ENST00000623466 TSHBP01222 138 aa10.01□□□□□ -0.81
PCDHB17P-202ENST00000623466 C10orf126Q8N4M7 172 aa10.01□□□□□ -0.81
PCDHB17P-202ENST00000623466 MRPL53Q96EL3 112 aaKnown RBP10.01□□□□□ -0.81
PCDHB17P-202ENST00000623466 UBE2D1P51668 147 aa10□□□□□ -0.81
PCDHB17P-202ENST00000623466 TP53TG1Q9Y2A0 90 aa10□□□□□ -0.81
PCDHB17P-202ENST00000623466 CD7P09564 240 aa10□□□□□ -0.81
PCDHB17P-202ENST00000623466 RNASE3P12724 160 aaKnown RBP10□□□□□ -0.81
PCDHB17P-202ENST00000623466 C9orf139Q6ZV77 190 aa10□□□□□ -0.81
PCDHB17P-202ENST00000623466 FAM223BA6NKX1 122 aa9.99□□□□□ -0.81
PCDHB17P-202ENST00000623466 ZNF56Q15929 161 aa9.99□□□□□ -0.81
PCDHB17P-202ENST00000623466 FAM223AQ8IWN6 122 aa9.99□□□□□ -0.81
PCDHB17P-202ENST00000623466 JMJD1CQ15652 2540 aa9.99□□□□□ -0.81
PCDHB17P-202ENST00000623466 H7C2G1 150 aa9.99□□□□□ -0.81
PCDHB17P-202ENST00000623466 NDUFA11Q86Y39 141 aa9.99□□□□□ -0.81
PCDHB17P-202ENST00000623466 F5H697 171 aa9.98□□□□□ -0.81
PCDHB17P-202ENST00000623466 WIPF1O43516 503 aa9.98□□□□□ -0.81
PCDHB17P-202ENST00000623466 TSPEAR-AS2P59090 65 aa9.98□□□□□ -0.81
PCDHB17P-202ENST00000623466 HERVK_113P63121 156 aa9.98□□□□□ -0.81
PCDHB17P-202ENST00000623466 TMEM170BQ5T4T1 132 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms