RNA–Protein interactions for RNA: ENST00000623266.1

PCDHB9-202, Transcript of protocadherin beta 9, humanhuman

TSL 4

Gene PCDHB9, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-202ENST00000623266 CXCL1P09341 107 aa5.87□□□□□ -1.47
PCDHB9-202ENST00000623266 OR5AL1P0C617 328 aa5.87□□□□□ -1.47
PCDHB9-202ENST00000623266 AKR1C3P42330 323 aa5.87□□□□□ -1.47
PCDHB9-202ENST00000623266 CCL20P78556 96 aa5.87□□□□□ -1.47
PCDHB9-202ENST00000623266 BAGE2Q86Y30 109 aa5.87□□□□□ -1.47
PCDHB9-202ENST00000623266 KCNRGQ8N5I3 272 aa5.87□□□□□ -1.47
PCDHB9-202ENST00000623266 C9orf163Q8N9P6 203 aa5.87□□□□□ -1.47
PCDHB9-202ENST00000623266 STOML3Q8TAV4 291 aa5.87□□□□□ -1.47
PCDHB9-202ENST00000623266 SFT2D1Q8WV19 159 aa5.87□□□□□ -1.47
PCDHB9-202ENST00000623266 TCEAL7Q9BRU2 100 aa5.87□□□□□ -1.47
PCDHB9-202ENST00000623266 C1orf43Q9BWL3 253 aa5.87□□□□□ -1.47
PCDHB9-202ENST00000623266 ZNF471Q9BX82 626 aaPredicted RBP5.87□□□□□ -1.47
PCDHB9-202ENST00000623266 PRR34Q9NV39 138 aa5.87□□□□□ -1.47
PCDHB9-202ENST00000623266 A0A1B0GV50 99 aa5.86□□□□□ -1.47
PCDHB9-202ENST00000623266 USP17L23D6RBM5 183 aa5.86□□□□□ -1.47
PCDHB9-202ENST00000623266 ANGP03950 147 aaKnown RBP5.86□□□□□ -1.47
PCDHB9-202ENST00000623266 S100A9P06702 114 aaKnown RBP5.86□□□□□ -1.47
PCDHB9-202ENST00000623266 RBX1P62877 108 aa5.86□□□□□ -1.47
PCDHB9-202ENST00000623266 SERTAD4-AS1Q5TG53 156 aa5.86□□□□□ -1.47
PCDHB9-202ENST00000623266 DGAT2L7PQ6IED9 249 aa5.86□□□□□ -1.47
PCDHB9-202ENST00000623266 SDIM1Q6ZPB5 146 aa5.86□□□□□ -1.47
PCDHB9-202ENST00000623266 F5H697 171 aa5.85□□□□□ -1.47
PCDHB9-202ENST00000623266 SLPIP03973 132 aa5.85□□□□□ -1.47
PCDHB9-202ENST00000623266 GAGE6Q13070 117 aa5.85□□□□□ -1.47
PCDHB9-202ENST00000623266 ZNF56Q15929 161 aa5.85□□□□□ -1.47
PCDHB9-202ENST00000623266 MIAQ16674 131 aa5.85□□□□□ -1.47
PCDHB9-202ENST00000623266 KCNIP4Q6PIL6 250 aa5.85□□□□□ -1.47
PCDHB9-202ENST00000623266 LINC00269Q8N2A0 174 aa5.85□□□□□ -1.47
PCDHB9-202ENST00000623266 CHCHD5Q9BSY4 110 aa5.85□□□□□ -1.47
PCDHB9-202ENST00000623266 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.85□□□□□ -1.47
PCDHB9-202ENST00000623266 M0QY20 66 aa5.84□□□□□ -1.47
PCDHB9-202ENST00000623266 GZMBP10144 247 aa5.84□□□□□ -1.47
PCDHB9-202ENST00000623266 C14orf177Q52M58 125 aa5.84□□□□□ -1.47
PCDHB9-202ENST00000623266 SPANXN1Q5VSR9 72 aa5.84□□□□□ -1.47
PCDHB9-202ENST00000623266 FAM213BQ8TBF2 198 aa5.84□□□□□ -1.47
PCDHB9-202ENST00000623266 DERL1Q9BUN8 251 aa5.84□□□□□ -1.47
PCDHB9-202ENST00000623266 TNXBP22105 4242 aa5.84□□□□□ -1.47
PCDHB9-202ENST00000623266 HMSDA8MTL9 139 aa5.83□□□□□ -1.48
PCDHB9-202ENST00000623266 UMAD1C9J7I0 102 aa5.83□□□□□ -1.48
PCDHB9-202ENST00000623266 H2AFB1P0C5Y9 115 aa5.83□□□□□ -1.48
PCDHB9-202ENST00000623266 IGLC6P0CF74 106 aa5.83□□□□□ -1.48
PCDHB9-202ENST00000623266 RPL35P42766 123 aaKnown RBP5.83□□□□□ -1.48
PCDHB9-202ENST00000623266 ZNF345Q14585 488 aa5.83□□□□□ -1.48
PCDHB9-202ENST00000623266 IQCJQ1A5X6 159 aa5.83□□□□□ -1.48
PCDHB9-202ENST00000623266 CLPSL2Q6UWE3 100 aa5.83□□□□□ -1.48
PCDHB9-202ENST00000623266 C20orf203Q8NBC4 194 aa5.83□□□□□ -1.48
PCDHB9-202ENST00000623266 GFRA4Q9GZZ7 299 aa5.83□□□□□ -1.48
PCDHB9-202ENST00000623266 IGLV4-60A0A075B6I1 120 aa5.82□□□□□ -1.48
PCDHB9-202ENST00000623266 RAB19A4D1S5 217 aa5.82□□□□□ -1.48
PCDHB9-202ENST00000623266 C19orf71A6NCJ1 209 aa5.82□□□□□ -1.48
PCDHB9-202ENST00000623266 HLA-DQA1P01909 254 aa5.82□□□□□ -1.48
PCDHB9-202ENST00000623266 CRPP02741 224 aa5.82□□□□□ -1.48
PCDHB9-202ENST00000623266 MT1HL1P0DM35 61 aa5.82□□□□□ -1.48
PCDHB9-202ENST00000623266 RPL37AP61513 92 aaKnown RBP5.82□□□□□ -1.48
PCDHB9-202ENST00000623266 TMEM97Q5BJF2 176 aa5.82□□□□□ -1.48
PCDHB9-202ENST00000623266 IGLV10-54A0A075B6I4 117 aa5.81□□□□□ -1.48
PCDHB9-202ENST00000623266 TRBV25-1A0A075B6N4 114 aa5.81□□□□□ -1.48
PCDHB9-202ENST00000623266 A0A0D9SG52 128 aa5.81□□□□□ -1.48
PCDHB9-202ENST00000623266 A0A1B0GUV1 79 aa5.81□□□□□ -1.48
PCDHB9-202ENST00000623266 REG3AQ06141 175 aa5.81□□□□□ -1.48
PCDHB9-202ENST00000623266 CIRBPQ14011 172 aaKnown RBP5.81□□□□□ -1.48
PCDHB9-202ENST00000623266 RGS21Q2M5E4 152 aa5.81□□□□□ -1.48
PCDHB9-202ENST00000623266 SUMO4Q6EEV6 95 aa5.81□□□□□ -1.48
PCDHB9-202ENST00000623266 C11orf52Q96A22 123 aa5.81□□□□□ -1.48
PCDHB9-202ENST00000623266 TRBV20OR9-2A0A075B6H5 130 aa5.8□□□□□ -1.48
PCDHB9-202ENST00000623266 TRAV1-1A0A0B4J248 108 aa5.8□□□□□ -1.48
PCDHB9-202ENST00000623266 IGHV1-24A0A0C4DH33 117 aa5.8□□□□□ -1.48
PCDHB9-202ENST00000623266 BCL2L11O43521 198 aa5.8□□□□□ -1.48
PCDHB9-202ENST00000623266 SMIM17P0DL12 118 aa5.8□□□□□ -1.48
PCDHB9-202ENST00000623266 RAB5CP51148 216 aa5.8□□□□□ -1.48
PCDHB9-202ENST00000623266 PKIAP61925 76 aa5.8□□□□□ -1.48
PCDHB9-202ENST00000623266 CLRN3Q8NCR9 226 aa5.8□□□□□ -1.48
PCDHB9-202ENST00000623266 PFDN1O60925 122 aa5.79□□□□□ -1.48
PCDHB9-202ENST00000623266 NTF3P20783 257 aa5.79□□□□□ -1.48
PCDHB9-202ENST00000623266 NKX2-5P52952 324 aaPredicted RBP5.79□□□□□ -1.48
PCDHB9-202ENST00000623266 CNBPP62633 177 aaKnown RBP5.79□□□□□ -1.48
PCDHB9-202ENST00000623266 CENPWQ5EE01 88 aa5.79□□□□□ -1.48
PCDHB9-202ENST00000623266 LYZL1Q6UWQ5 148 aa5.79□□□□□ -1.48
PCDHB9-202ENST00000623266 C9orf62Q8N4C0 152 aa5.79□□□□□ -1.48
PCDHB9-202ENST00000623266 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.79□□□□□ -1.48
PCDHB9-202ENST00000623266 FER1L6-AS1Q8NA97 138 aa5.79□□□□□ -1.48
PCDHB9-202ENST00000623266 OR2D3Q8NGH3 330 aa5.79□□□□□ -1.48
PCDHB9-202ENST00000623266 AP1S3Q96PC3 154 aa5.79□□□□□ -1.48
PCDHB9-202ENST00000623266 NIT2Q9NQR4 276 aa5.79□□□□□ -1.48
PCDHB9-202ENST00000623266 GNG13Q9P2W3 67 aa5.79□□□□□ -1.48
PCDHB9-202ENST00000623266 A0A087WYN8 130 aa5.78□□□□□ -1.48
PCDHB9-202ENST00000623266 TRAV8-4A0A0B4J246 113 aa5.78□□□□□ -1.48
PCDHB9-202ENST00000623266 KANTRA0A1W2PQU2 76 aa5.78□□□□□ -1.48
PCDHB9-202ENST00000623266 P01737 135 aa5.78□□□□□ -1.48
PCDHB9-202ENST00000623266 MGPP08493 103 aa5.78□□□□□ -1.48
PCDHB9-202ENST00000623266 CHTF8P0CG12 524 aa5.78□□□□□ -1.48
PCDHB9-202ENST00000623266 CACNG7P62955 275 aa5.78□□□□□ -1.48
PCDHB9-202ENST00000623266 RASL11AQ6T310 242 aa5.78□□□□□ -1.48
PCDHB9-202ENST00000623266 NUDT10Q8NFP7 164 aa5.78□□□□□ -1.48
PCDHB9-202ENST00000623266 NUDT11Q96G61 164 aa5.78□□□□□ -1.48
PCDHB9-202ENST00000623266 TPPP3Q9BW30 176 aa5.78□□□□□ -1.48
PCDHB9-202ENST00000623266 PLA2G2DQ9UNK4 145 aa5.78□□□□□ -1.48
PCDHB9-202ENST00000623266 hDV102S1A0JD36 115 aa5.77□□□□□ -1.49
PCDHB9-202ENST00000623266 F2Z2F3 143 aa5.77□□□□□ -1.49
PCDHB9-202ENST00000623266 RPS20P60866 119 aaKnown RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms