RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 IGHV1-69P01742 117 aa10.52□□□□□ -0.72
LDB3-209ENST00000623056 ZNF22P17026 224 aaPredicted RBP10.52□□□□□ -0.72
LDB3-209ENST00000623056 LY6DQ14210 128 aa10.52□□□□□ -0.72
LDB3-209ENST00000623056 CDSNQ15517 529 aa10.52□□□□□ -0.72
LDB3-209ENST00000623056 BEX4Q9NWD9 120 aaPredicted RBP10.52□□□□□ -0.72
LDB3-209ENST00000623056 COL6A6A6NMZ7 2263 aa10.52□□□□□ -0.73
LDB3-209ENST00000623056 TRBV6-5A0A0K0K1A5 114 aa10.52□□□□□ -0.73
LDB3-209ENST00000623056 M0R2P5 195 aa10.52□□□□□ -0.73
LDB3-209ENST00000623056 LGALS9O00182 355 aa10.52□□□□□ -0.73
LDB3-209ENST00000623056 NDUFA4O00483 81 aa10.52□□□□□ -0.73
LDB3-209ENST00000623056 Q6Q795 121 aa10.52□□□□□ -0.73
LDB3-209ENST00000623056 FAM159AQ6UWV7 190 aa10.52□□□□□ -0.73
LDB3-209ENST00000623056 TRBV10-2A0A0K0K1G8 114 aa10.51□□□□□ -0.73
LDB3-209ENST00000623056 CCL21O00585 134 aa10.51□□□□□ -0.73
LDB3-209ENST00000623056 C19orf54Q5BKX5 351 aa10.51□□□□□ -0.73
LDB3-209ENST00000623056 TMEM219Q86XT9 240 aa10.51□□□□□ -0.73
LDB3-209ENST00000623056 KLLNB2CW77 178 aa10.51□□□□□ -0.73
LDB3-209ENST00000623056 TRIAP1O43715 76 aa10.51□□□□□ -0.73
LDB3-209ENST00000623056 FAM74A4Q5TZK3 123 aa10.51□□□□□ -0.73
LDB3-209ENST00000623056 ZNF580Q9UK33 172 aa10.51□□□□□ -0.73
LDB3-209ENST00000623056 ASH1LQ9NR48 2969 aaKnown RBP10.5□□□□□ -0.73
LDB3-209ENST00000623056 A0A0J9YX75 114 aa10.5□□□□□ -0.73
LDB3-209ENST00000623056 TRBV30A0A0K0K1B3 111 aa10.5□□□□□ -0.73
LDB3-209ENST00000623056 H3BMM0 161 aa10.5□□□□□ -0.73
LDB3-209ENST00000623056 NSUN5P1Q3KNT7 163 aa10.5□□□□□ -0.73
LDB3-209ENST00000623056 FBXL19-AS1Q494R0 122 aa10.5□□□□□ -0.73
LDB3-209ENST00000623056 C15orf53Q8NAA6 179 aa10.5□□□□□ -0.73
LDB3-209ENST00000623056 UBE2WQ96B02 151 aa10.5□□□□□ -0.73
LDB3-209ENST00000623056 A0A0J9YXY3 114 aa10.5□□□□□ -0.73
LDB3-209ENST00000623056 A0A0J9YXV3 536 aa10.49□□□□□ -0.73
LDB3-209ENST00000623056 RHOHQ15669 191 aa10.49□□□□□ -0.73
LDB3-209ENST00000623056 ZFHX3Q15911 3703 aa10.49□□□□□ -0.73
LDB3-209ENST00000623056 M0QY20 66 aa10.48□□□□□ -0.73
LDB3-209ENST00000623056 ZNF56Q15929 161 aa10.48□□□□□ -0.73
LDB3-209ENST00000623056 MDFICQ9P1T7 246 aa10.48□□□□□ -0.73
LDB3-209ENST00000623056 TRAV12-3A0A0B4J271 114 aa10.47□□□□□ -0.73
LDB3-209ENST00000623056 NPFFO15130 113 aa10.47□□□□□ -0.73
LDB3-209ENST00000623056 ADORA2A-AS1P86434 159 aa10.47□□□□□ -0.73
LDB3-209ENST00000623056 C2orf82Q6UX34 121 aa10.47□□□□□ -0.73
LDB3-209ENST00000623056 SPTBN1Q01082 2364 aaKnown RBP10.47□□□□□ -0.73
LDB3-209ENST00000623056 ADARB2-AS1A8MUL3 147 aa10.47□□□□□ -0.73
LDB3-209ENST00000623056 IGHV3-11P01762 117 aa10.47□□□□□ -0.73
LDB3-209ENST00000623056 C20orf203Q8NBC4 194 aa10.47□□□□□ -0.73
LDB3-209ENST00000623056 LITAFQ99732 161 aa10.47□□□□□ -0.73
LDB3-209ENST00000623056 RHPN1-AS1Q9BWJ2 59 aa10.47□□□□□ -0.73
LDB3-209ENST00000623056 MOB4Q9Y3A3 225 aa10.47□□□□□ -0.73
LDB3-209ENST00000623056 H7C423 109 aa10.46□□□□□ -0.73
LDB3-209ENST00000623056 ICOSQ9Y6W8 199 aa10.46□□□□□ -0.73
LDB3-209ENST00000623056 CHD6Q8TD26 2715 aa10.46□□□□□ -0.73
LDB3-209ENST00000623056 IGLV4-3A0A075B6K6 122 aa10.46□□□□□ -0.74
LDB3-209ENST00000623056 IGHV3-30-3P0DP02 117 aa10.46□□□□□ -0.74
LDB3-209ENST00000623056 C9orf85Q96MD7 179 aa10.46□□□□□ -0.74
LDB3-209ENST00000623056 FAM208BQ5VWN6 2430 aa10.45□□□□□ -0.74
LDB3-209ENST00000623056 IGHV3-16A0A0C4DH30 117 aa10.45□□□□□ -0.74
LDB3-209ENST00000623056 PRSS2P07478 247 aa10.45□□□□□ -0.74
LDB3-209ENST00000623056 SPXQ9BT56 116 aa10.45□□□□□ -0.74
LDB3-209ENST00000623056 PKD1L2Q7Z442 2459 aa10.44□□□□□ -0.74
LDB3-209ENST00000623056 ADAMTSL4-AS1Q5T5F5 129 aa10.44□□□□□ -0.74
LDB3-209ENST00000623056 TIMM21Q9BVV7 248 aa10.44□□□□□ -0.74
LDB3-209ENST00000623056 PRORYQ9H606 182 aa10.44□□□□□ -0.74
LDB3-209ENST00000623056 H3BT86 120 aa10.43□□□□□ -0.74
LDB3-209ENST00000623056 I3L3M4 83 aa10.43□□□□□ -0.74
LDB3-209ENST00000623056 FAM110AQ9BQ89 295 aa10.43□□□□□ -0.74
LDB3-209ENST00000623056 EDN2P20800 178 aa10.42□□□□□ -0.74
LDB3-209ENST00000623056 MRPL23Q16540 153 aaKnown RBP10.42□□□□□ -0.74
LDB3-209ENST00000623056 SMIM20Q8N5G0 67 aa10.42□□□□□ -0.74
LDB3-209ENST00000623056 IGHV3OR16-10A0A075B7F0 116 aa10.42□□□□□ -0.74
LDB3-209ENST00000623056 TRAV8-3A0A0A6YYJ7 113 aa10.42□□□□□ -0.74
LDB3-209ENST00000623056 Q6ZSV7 163 aa10.42□□□□□ -0.74
LDB3-209ENST00000623056 CLEC2BQ92478 149 aa10.42□□□□□ -0.74
LDB3-209ENST00000623056 PRRC2AP48634 2157 aaKnown RBP10.42□□□□□ -0.74
LDB3-209ENST00000623056 COX6CP09669 75 aa10.41□□□□□ -0.74
LDB3-209ENST00000623056 USMG5Q96IX5 58 aa10.41□□□□□ -0.74
LDB3-209ENST00000623056 SPANXDQ9BXN6 97 aa10.41□□□□□ -0.74
LDB3-209ENST00000623056 SPANXCQ9NY87 97 aa10.41□□□□□ -0.74
LDB3-209ENST00000623056 TRAV12-2A0A075B6T6 113 aa10.41□□□□□ -0.74
LDB3-209ENST00000623056 ID1P41134 155 aa10.41□□□□□ -0.74
LDB3-209ENST00000623056 DUX3Q96PT4 197 aa10.41□□□□□ -0.74
LDB3-209ENST00000623056 DAZ1Q9NQZ3 744 aaKnown RBP10.41□□□□□ -0.74
LDB3-209ENST00000623056 FAM240AA0A1B0GVK7 77 aa10.4□□□□□ -0.74
LDB3-209ENST00000623056 CD28P10747 220 aa10.4□□□□□ -0.74
LDB3-209ENST00000623056 NPC2P61916 151 aa10.4□□□□□ -0.74
LDB3-209ENST00000623056 LMO4P61968 165 aa10.4□□□□□ -0.74
LDB3-209ENST00000623056 HERV-K104P63124 156 aa10.4□□□□□ -0.74
LDB3-209ENST00000623056 FAM104AQ969W3 186 aa10.4□□□□□ -0.74
LDB3-209ENST00000623056 PF4V1P10720 104 aa10.4□□□□□ -0.74
LDB3-209ENST00000623056 MRPS36P82909 103 aaKnown RBP10.4□□□□□ -0.74
LDB3-209ENST00000623056 MIAQ16674 131 aa10.4□□□□□ -0.74
LDB3-209ENST00000623056 MEIG1Q5JSS6 88 aa10.4□□□□□ -0.74
LDB3-209ENST00000623056 DCANP1Q8TF63 244 aa10.4□□□□□ -0.74
LDB3-209ENST00000623056 NDUFA12Q9UI09 145 aa10.4□□□□□ -0.74
LDB3-209ENST00000623056 IGHV1-58A0A0C4DH39 117 aa10.39□□□□□ -0.75
LDB3-209ENST00000623056 LST1O00453 97 aa10.39□□□□□ -0.75
LDB3-209ENST00000623056 DEFB121Q5J5C9 76 aa10.39□□□□□ -0.75
LDB3-209ENST00000623056 SHISA2Q6UWI4 295 aa10.39□□□□□ -0.75
LDB3-209ENST00000623056 SPANXA1Q9NS26 97 aa10.39□□□□□ -0.75
LDB3-209ENST00000623056 A0A1W2PPR1 153 aa10.39□□□□□ -0.75
LDB3-209ENST00000623056 IGKV3-20P01619 116 aa10.39□□□□□ -0.75
LDB3-209ENST00000623056 HIVEP3Q5T1R4 2406 aa10.39□□□□□ -0.75
LDB3-209ENST00000623056 BRI3O95415 125 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms