RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 TRBV7-3A0A075B6L6 115 aa5.58□□□□□ -1.52
COLCA1-205ENST00000620864 H7C423 109 aa5.58□□□□□ -1.52
COLCA1-205ENST00000620864 TIMM17BO60830 172 aa5.58□□□□□ -1.52
COLCA1-205ENST00000620864 RLFQ13129 1914 aa5.58□□□□□ -1.52
COLCA1-205ENST00000620864 WT1-ASQ06250 92 aa5.58□□□□□ -1.52
COLCA1-205ENST00000620864 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.58□□□□□ -1.52
COLCA1-205ENST00000620864 WI2-2373I1.2A0A1W2PRP0 233 aa5.58□□□□□ -1.52
COLCA1-205ENST00000620864 IGKV2-29A2NJV5 120 aaPredicted RBP5.58□□□□□ -1.52
COLCA1-205ENST00000620864 MLANAQ16655 118 aa5.58□□□□□ -1.52
COLCA1-205ENST00000620864 C14orf177Q52M58 125 aa5.58□□□□□ -1.52
COLCA1-205ENST00000620864 ODF3L1Q8IXM7 274 aa5.58□□□□□ -1.52
COLCA1-205ENST00000620864 VWA8A3KMH1 1905 aa5.58□□□□□ -1.52
COLCA1-205ENST00000620864 E7EQL1 145 aa5.58□□□□□ -1.52
COLCA1-205ENST00000620864 F8W735 103 aaPredicted RBP5.58□□□□□ -1.52
COLCA1-205ENST00000620864 KAAG1Q9UBP8 84 aa5.58□□□□□ -1.52
COLCA1-205ENST00000620864 SPRY4Q9C004 299 aa5.58□□□□□ -1.52
COLCA1-205ENST00000620864 OBSL1O75147 1896 aa5.58□□□□□ -1.52
COLCA1-205ENST00000620864 TEX22C9J3V5 150 aa5.58□□□□□ -1.52
COLCA1-205ENST00000620864 WT1P19544 449 aaPredicted RBP5.58□□□□□ -1.52
COLCA1-205ENST00000620864 KIAA1671Q9BY89 1806 aa5.57□□□□□ -1.52
COLCA1-205ENST00000620864 M0R2N4 97 aa5.57□□□□□ -1.52
COLCA1-205ENST00000620864 GTSF1Q8WW33 167 aa5.57□□□□□ -1.52
COLCA1-205ENST00000620864 TRBV30A0A0K0K1B3 111 aa5.57□□□□□ -1.52
COLCA1-205ENST00000620864 CLEC2BQ92478 149 aa5.57□□□□□ -1.52
COLCA1-205ENST00000620864 AGPAT4-IT1Q9H0P7 198 aa5.57□□□□□ -1.52
COLCA1-205ENST00000620864 TRBV10-1A0A0K0K1A3 114 aa5.57□□□□□ -1.52
COLCA1-205ENST00000620864 C17orf58Q2M2W7 97 aa5.57□□□□□ -1.52
COLCA1-205ENST00000620864 UFSP1Q6NVU6 142 aa5.57□□□□□ -1.52
COLCA1-205ENST00000620864 A0A0J9YXV3 536 aa5.57□□□□□ -1.52
COLCA1-205ENST00000620864 C17orf77Q96MU5 243 aa5.57□□□□□ -1.52
COLCA1-205ENST00000620864 PLXND1Q9Y4D7 1925 aa5.57□□□□□ -1.52
COLCA1-205ENST00000620864 C15orf65H3BRN8 121 aa5.56□□□□□ -1.52
COLCA1-205ENST00000620864 NUP210Q8TEM1 1887 aaPredicted RBP5.56□□□□□ -1.52
COLCA1-205ENST00000620864 CCL24O00175 119 aa5.56□□□□□ -1.52
COLCA1-205ENST00000620864 IGFL3Q6UXB1 125 aa5.56□□□□□ -1.52
COLCA1-205ENST00000620864 DAND5Q8N907 189 aa5.56□□□□□ -1.52
COLCA1-205ENST00000620864 C5orf38Q86SI9 138 aa5.56□□□□□ -1.52
COLCA1-205ENST00000620864 VPREB3Q9UKI3 123 aa5.56□□□□□ -1.52
COLCA1-205ENST00000620864 TANC2Q9HCD6 1990 aa5.56□□□□□ -1.52
COLCA1-205ENST00000620864 LY6G6EA0A0G2JKS1 128 aa5.56□□□□□ -1.52
COLCA1-205ENST00000620864 GP9P14770 177 aa5.56□□□□□ -1.52
COLCA1-205ENST00000620864 RBX1P62877 108 aa5.56□□□□□ -1.52
COLCA1-205ENST00000620864 U3KQA8 63 aa5.56□□□□□ -1.52
COLCA1-205ENST00000620864 C17orf82Q86X59 251 aaPredicted RBP5.56□□□□□ -1.52
COLCA1-205ENST00000620864 FAM222AQ5U5X8 452 aa5.55□□□□□ -1.52
COLCA1-205ENST00000620864 LYPD2Q6UXB3 125 aa5.55□□□□□ -1.52
COLCA1-205ENST00000620864 NOP10Q9NPE3 64 aaKnown RBP5.55□□□□□ -1.52
COLCA1-205ENST00000620864 C1orf147Q96MC9 270 aaPredicted RBP5.55□□□□□ -1.52
COLCA1-205ENST00000620864 SPART-AS1P0CW21 52 aa5.55□□□□□ -1.52
COLCA1-205ENST00000620864 RNASE13Q5GAN3 156 aaKnown RBP5.55□□□□□ -1.52
COLCA1-205ENST00000620864 MUC7Q8TAX7 377 aa5.55□□□□□ -1.52
COLCA1-205ENST00000620864 NANOS2P60321 138 aaKnown RBP5.55□□□□□ -1.52
COLCA1-205ENST00000620864 UBE2D4Q9Y2X8 147 aa5.55□□□□□ -1.52
COLCA1-205ENST00000620864 MED13LQ71F56 2210 aa5.55□□□□□ -1.52
COLCA1-205ENST00000620864 B3GALT5-AS1P59052 145 aa5.55□□□□□ -1.52
COLCA1-205ENST00000620864 PRO3102Q9H379 93 aa5.55□□□□□ -1.52
COLCA1-205ENST00000620864 SDIM1Q6ZPB5 146 aa5.55□□□□□ -1.52
COLCA1-205ENST00000620864 SPATA3Q8NHX4 192 aa5.55□□□□□ -1.52
COLCA1-205ENST00000620864 ZNF524Q96C55 264 aa5.55□□□□□ -1.52
COLCA1-205ENST00000620864 CCDC168Q8NDH2 2452 aa5.55□□□□□ -1.52
COLCA1-205ENST00000620864 GRNP28799 593 aaKnown RBP5.55□□□□□ -1.52
COLCA1-205ENST00000620864 Q8N9L7 120 aa5.55□□□□□ -1.52
COLCA1-205ENST00000620864 TNRC6BQ9UPQ9 1833 aaKnown RBP5.54□□□□□ -1.52
COLCA1-205ENST00000620864 LOC107984640A0A0U1RRK4 108 aa5.54□□□□□ -1.52
COLCA1-205ENST00000620864 FAM19A5Q7Z5A7 132 aaPredicted RBP5.54□□□□□ -1.52
COLCA1-205ENST00000620864 MIR7-3HGQ8N6C7 128 aa5.54□□□□□ -1.52
COLCA1-205ENST00000620864 RPL39LQ96EH5 51 aaKnown RBP5.54□□□□□ -1.52
COLCA1-205ENST00000620864 HILS1P60008 231 aa5.54□□□□□ -1.52
COLCA1-205ENST00000620864 Q6ZQT7 251 aa5.54□□□□□ -1.52
COLCA1-205ENST00000620864 TMEM89A2RUT3 159 aa5.54□□□□□ -1.52
COLCA1-205ENST00000620864 SPAG11BQ08648 103 aa5.54□□□□□ -1.52
COLCA1-205ENST00000620864 IGHV4-4A0A075B6R2 117 aa5.54□□□□□ -1.52
COLCA1-205ENST00000620864 GNRH2O43555 120 aa5.54□□□□□ -1.52
COLCA1-205ENST00000620864 IGHV3-30-3P0DP02 117 aa5.54□□□□□ -1.52
COLCA1-205ENST00000620864 SEM1Q6ZVN7 128 aa5.54□□□□□ -1.52
COLCA1-205ENST00000620864 NPBQ8NG41 125 aa5.54□□□□□ -1.52
COLCA1-205ENST00000620864 GYPEP15421 78 aa5.54□□□□□ -1.52
COLCA1-205ENST00000620864 PTPN13Q12923 2485 aa5.54□□□□□ -1.52
COLCA1-205ENST00000620864 TEX49A0A1B0GTD5 131 aa5.54□□□□□ -1.52
COLCA1-205ENST00000620864 GATA1P15976 413 aaPredicted RBP5.54□□□□□ -1.52
COLCA1-205ENST00000620864 UBE2D2P62837 147 aa5.54□□□□□ -1.52
COLCA1-205ENST00000620864 PIK3CD-AS1Q5SR53 167 aa5.54□□□□□ -1.52
COLCA1-205ENST00000620864 TDRG1Q3Y452 100 aa5.53□□□□□ -1.52
COLCA1-205ENST00000620864 WDR86Q86TI4 376 aa5.53□□□□□ -1.52
COLCA1-205ENST00000620864 K7EMT4 169 aa5.53□□□□□ -1.52
COLCA1-205ENST00000620864 ENHOQ6UWT2 76 aa5.53□□□□□ -1.52
COLCA1-205ENST00000620864 TP73-AS1Q9UF72 201 aa5.53□□□□□ -1.52
COLCA1-205ENST00000620864 C20orf203Q8NBC4 194 aa5.53□□□□□ -1.52
COLCA1-205ENST00000620864 IBA57-AS1B1ANH7 110 aa5.53□□□□□ -1.52
COLCA1-205ENST00000620864 NRACQ8N912 160 aa5.53□□□□□ -1.52
COLCA1-205ENST00000620864 RNF185Q96GF1 192 aa5.53□□□□□ -1.52
COLCA1-205ENST00000620864 NCR3O14931 201 aa5.53□□□□□ -1.52
COLCA1-205ENST00000620864 Q6JHZ5 121 aa5.53□□□□□ -1.52
COLCA1-205ENST00000620864 HIVEP2P31629 2446 aa5.53□□□□□ -1.52
COLCA1-205ENST00000620864 SORL1Q92673 2214 aa5.52□□□□□ -1.53
COLCA1-205ENST00000620864 TRAV7A0A075B6U4 112 aa5.52□□□□□ -1.53
COLCA1-205ENST00000620864 IGKV2D-26A0A0A0MRZ7 120 aa5.52□□□□□ -1.53
COLCA1-205ENST00000620864 G3V318 75 aa5.52□□□□□ -1.53
COLCA1-205ENST00000620864 LOXP28300 417 aaPredicted RBP5.52□□□□□ -1.53
COLCA1-205ENST00000620864 ASPHD1Q5U4P2 390 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms