RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-223ENST00000620507 SNCGO76070 127 aa6.91□□□□□ -1.3
RBFOX1-223ENST00000620507 Q6YL49 198 aa6.91□□□□□ -1.3
RBFOX1-223ENST00000620507 OR13C6PQ8NH95 151 aa6.91□□□□□ -1.3
RBFOX1-223ENST00000620507 IGHV3-16A0A0C4DH30 117 aa6.91□□□□□ -1.3
RBFOX1-223ENST00000620507 RHODO00212 210 aa6.91□□□□□ -1.3
RBFOX1-223ENST00000620507 PF4P02776 101 aa6.91□□□□□ -1.3
RBFOX1-223ENST00000620507 IGHV4-31P0DP07 118 aa6.91□□□□□ -1.3
RBFOX1-223ENST00000620507 EDN2P20800 178 aa6.91□□□□□ -1.3
RBFOX1-223ENST00000620507 CIRBPQ14011 172 aaKnown RBP6.91□□□□□ -1.3
RBFOX1-223ENST00000620507 ETDBQ3ZM63 59 aa6.91□□□□□ -1.3
RBFOX1-223ENST00000620507 DCANP1Q8TF63 244 aa6.91□□□□□ -1.3
RBFOX1-223ENST00000620507 PSMG3-AS1Q96PY0 264 aa6.91□□□□□ -1.3
RBFOX1-223ENST00000620507 CENPEQ02224 2701 aa6.91□□□□□ -1.3
RBFOX1-223ENST00000620507 BRI3O95415 125 aa6.9□□□□□ -1.3
RBFOX1-223ENST00000620507 GAGE13Q4V321 117 aa6.9□□□□□ -1.3
RBFOX1-223ENST00000620507 APRG1Q8IVJ8 170 aa6.9□□□□□ -1.3
RBFOX1-223ENST00000620507 TMEM61Q8N0U2 210 aa6.9□□□□□ -1.3
RBFOX1-223ENST00000620507 PLEKHB2Q96CS7 222 aa6.9□□□□□ -1.3
RBFOX1-223ENST00000620507 RNF183Q96D59 192 aa6.9□□□□□ -1.3
RBFOX1-223ENST00000620507 KLLNB2CW77 178 aa6.9□□□□□ -1.3
RBFOX1-223ENST00000620507 M0R2P5 195 aa6.9□□□□□ -1.3
RBFOX1-223ENST00000620507 GAGE2BQ13066 116 aa6.9□□□□□ -1.3
RBFOX1-223ENST00000620507 RHOHQ15669 191 aa6.9□□□□□ -1.3
RBFOX1-223ENST00000620507 C12orf74Q32Q52 190 aa6.9□□□□□ -1.3
RBFOX1-223ENST00000620507 GAGE2EQ4V326 116 aa6.9□□□□□ -1.3
RBFOX1-223ENST00000620507 GAGE2DQ9UEU5 116 aa6.9□□□□□ -1.3
RBFOX1-223ENST00000620507 HIVEP2P31629 2446 aa6.9□□□□□ -1.31
RBFOX1-223ENST00000620507 IGHV3-53P01767 116 aa6.9□□□□□ -1.31
RBFOX1-223ENST00000620507 COX6CP09669 75 aa6.9□□□□□ -1.31
RBFOX1-223ENST00000620507 LGALS9O00182 355 aa6.89□□□□□ -1.31
RBFOX1-223ENST00000620507 SOCS3O14543 225 aa6.89□□□□□ -1.31
RBFOX1-223ENST00000620507 NSUN5P1Q3KNT7 163 aa6.89□□□□□ -1.31
RBFOX1-223ENST00000620507 ODF3Q96PU9 254 aa6.89□□□□□ -1.31
RBFOX1-223ENST00000620507 ABCA2Q9BZC7 2435 aa6.89□□□□□ -1.31
RBFOX1-223ENST00000620507 GAGE12JA6NER3 117 aa6.89□□□□□ -1.31
RBFOX1-223ENST00000620507 GAGE7O76087 117 aa6.89□□□□□ -1.31
RBFOX1-223ENST00000620507 GAGE12FP0CL80 117 aa6.89□□□□□ -1.31
RBFOX1-223ENST00000620507 GAGE12GP0CL81 117 aa6.89□□□□□ -1.31
RBFOX1-223ENST00000620507 GAGE12IP0CL82 117 aa6.89□□□□□ -1.31
RBFOX1-223ENST00000620507 GAGE4Q13068 117 aa6.89□□□□□ -1.31
RBFOX1-223ENST00000620507 C19orf54Q5BKX5 351 aa6.89□□□□□ -1.31
RBFOX1-223ENST00000620507 IGKV3OR2-268A0A0C4DH90 116 aa6.89□□□□□ -1.31
RBFOX1-223ENST00000620507 J3QQQ9 107 aa6.89□□□□□ -1.31
RBFOX1-223ENST00000620507 RPL36AP83881 106 aaKnown RBP6.89□□□□□ -1.31
RBFOX1-223ENST00000620507 C5orf47Q569G3 176 aa6.89□□□□□ -1.31
RBFOX1-223ENST00000620507 RPL36ALQ969Q0 106 aaKnown RBP6.89□□□□□ -1.31
RBFOX1-223ENST00000620507 TIMM21Q9BVV7 248 aa6.89□□□□□ -1.31
RBFOX1-223ENST00000620507 E9PLD3 99 aa6.88□□□□□ -1.31
RBFOX1-223ENST00000620507 IGHV3-38A0A0C4DH36 116 aa6.88□□□□□ -1.31
RBFOX1-223ENST00000620507 KLK9Q2XQG4 91 aa6.88□□□□□ -1.31
RBFOX1-223ENST00000620507 NEXN-AS1Q8NBZ9 246 aa6.88□□□□□ -1.31
RBFOX1-223ENST00000620507 TIMM17AQ99595 171 aa6.88□□□□□ -1.31
RBFOX1-223ENST00000620507 SPAG8Q99932 426 aaPredicted RBP6.88□□□□□ -1.31
RBFOX1-223ENST00000620507 HHLA3Q9XRX5 114 aa6.88□□□□□ -1.31
RBFOX1-223ENST00000620507 LRBAP50851 2863 aa6.88□□□□□ -1.31
RBFOX1-223ENST00000620507 TACC2O95359 2948 aa6.88□□□□□ -1.31
RBFOX1-223ENST00000620507 TRBV20-1A0A075B6N2 111 aa6.88□□□□□ -1.31
RBFOX1-223ENST00000620507 C11orf86A6NJI1 115 aa6.88□□□□□ -1.31
RBFOX1-223ENST00000620507 RPL35AP18077 110 aaKnown RBP6.88□□□□□ -1.31
RBFOX1-223ENST00000620507 CMC4P56277 68 aaPredicted RBP6.88□□□□□ -1.31
RBFOX1-223ENST00000620507 MEIG1Q5JSS6 88 aa6.88□□□□□ -1.31
RBFOX1-223ENST00000620507 TMEM101Q96IK0 257 aa6.88□□□□□ -1.31
RBFOX1-223ENST00000620507 KALRNO60229 2985 aa6.87□□□□□ -1.31
RBFOX1-223ENST00000620507 FGF6P10767 208 aa6.87□□□□□ -1.31
RBFOX1-223ENST00000620507 ASPMQ8IZT6 3477 aa6.87□□□□□ -1.31
RBFOX1-223ENST00000620507 CCL24O00175 119 aa6.87□□□□□ -1.31
RBFOX1-223ENST00000620507 ZNF843Q8N446 348 aa6.87□□□□□ -1.31
RBFOX1-223ENST00000620507 C10orf126Q8N4M7 172 aa6.87□□□□□ -1.31
RBFOX1-223ENST00000620507 C3orf56Q8N813 242 aa6.87□□□□□ -1.31
RBFOX1-223ENST00000620507 DLX4Q92988 240 aaPredicted RBP6.87□□□□□ -1.31
RBFOX1-223ENST00000620507 ZNF702PQ9H963 129 aa6.87□□□□□ -1.31
RBFOX1-223ENST00000620507 M0QXV9 152 aa6.87□□□□□ -1.31
RBFOX1-223ENST00000620507 AMTNQ6UX39 209 aa6.87□□□□□ -1.31
RBFOX1-223ENST00000620507 TRGV4A0A0C4DH28 118 aa6.86□□□□□ -1.31
RBFOX1-223ENST00000620507 H3BMG7 143 aa6.86□□□□□ -1.31
RBFOX1-223ENST00000620507 RPL32P62910 135 aaKnown RBP6.86□□□□□ -1.31
RBFOX1-223ENST00000620507 RNASE13Q5GAN3 156 aaKnown RBP6.86□□□□□ -1.31
RBFOX1-223ENST00000620507 MAPKAPK5-AS1Q8N8E1 139 aa6.86□□□□□ -1.31
RBFOX1-223ENST00000620507 IGLV2-18A0A075B6J9 118 aa6.86□□□□□ -1.31
RBFOX1-223ENST00000620507 C4orf3Q8WVX3 66 aa6.86□□□□□ -1.31
RBFOX1-223ENST00000620507 ERG28Q9UKR5 140 aa6.86□□□□□ -1.31
RBFOX1-223ENST00000620507 MTORP42345 2549 aa6.86□□□□□ -1.31
RBFOX1-223ENST00000620507 IGLL5B9A064 214 aa6.86□□□□□ -1.31
RBFOX1-223ENST00000620507 ZNRF2Q8NHG8 242 aa6.86□□□□□ -1.31
RBFOX1-223ENST00000620507 A0A0J9YXV3 536 aa6.85□□□□□ -1.31
RBFOX1-223ENST00000620507 LRRC75A-AS1Q8N1F1 130 aa6.85□□□□□ -1.31
RBFOX1-223ENST00000620507 H3BMM0 161 aa6.85□□□□□ -1.31
RBFOX1-223ENST00000620507 KRTAP10-9P60411 292 aa6.85□□□□□ -1.31
RBFOX1-223ENST00000620507 MRPL23Q16540 153 aaKnown RBP6.85□□□□□ -1.31
RBFOX1-223ENST00000620507 OPRPNQ99935 248 aaPredicted RBP6.85□□□□□ -1.31
RBFOX1-223ENST00000620507 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.85□□□□□ -1.31
RBFOX1-223ENST00000620507 C20orf203Q8NBC4 194 aa6.85□□□□□ -1.31
RBFOX1-223ENST00000620507 C1QTNF4Q9BXJ3 329 aa6.85□□□□□ -1.31
RBFOX1-223ENST00000620507 A0A0U1RRA0 63 aa6.85□□□□□ -1.31
RBFOX1-223ENST00000620507 M0QY20 66 aa6.85□□□□□ -1.31
RBFOX1-223ENST00000620507 RNF152Q8N8N0 203 aa6.85□□□□□ -1.31
RBFOX1-223ENST00000620507 ZNF580Q9UK33 172 aa6.85□□□□□ -1.31
RBFOX1-223ENST00000620507 POLR2KP53803 58 aaKnown RBP6.84□□□□□ -1.31
RBFOX1-223ENST00000620507 NPC2P61916 151 aa6.84□□□□□ -1.31
RBFOX1-223ENST00000620507 TM2D2Q9BX73 214 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms