RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 RNF185Q96GF1 192 aa8.6□□□□□ -1.03
PCDHGA9-202ENST00000616887 USMG5Q96IX5 58 aa8.6□□□□□ -1.03
PCDHGA9-202ENST00000616887 PPDPFQ9H3Y8 114 aa8.6□□□□□ -1.03
PCDHGA9-202ENST00000616887 NXT2Q9NPJ8 142 aaKnown RBP8.6□□□□□ -1.03
PCDHGA9-202ENST00000616887 IGKV3D-20A0A0C4DH25 116 aa8.59□□□□□ -1.03
PCDHGA9-202ENST00000616887 UBE2D3P61077 147 aa8.59□□□□□ -1.03
PCDHGA9-202ENST00000616887 UBE2D2P62837 147 aa8.59□□□□□ -1.03
PCDHGA9-202ENST00000616887 MYOZ3Q8TDC0 251 aa8.59□□□□□ -1.03
PCDHGA9-202ENST00000616887 TMEM190Q8WZ59 177 aa8.59□□□□□ -1.03
PCDHGA9-202ENST00000616887 SPRY2O43597 315 aa8.59□□□□□ -1.03
PCDHGA9-202ENST00000616887 LGALS1P09382 135 aaKnown RBP8.59□□□□□ -1.03
PCDHGA9-202ENST00000616887 PSMB8P28062 276 aa8.59□□□□□ -1.03
PCDHGA9-202ENST00000616887 C3orf56Q8N813 242 aa8.59□□□□□ -1.03
PCDHGA9-202ENST00000616887 VPREB3Q9UKI3 123 aa8.59□□□□□ -1.03
PCDHGA9-202ENST00000616887 SETD2Q9BYW2 2564 aaPredicted RBP8.58□□□□□ -1.04
PCDHGA9-202ENST00000616887 SRSF9Q13242 221 aaKnown RBP eCLIP8.58□□□□□ -1.04
PCDHGA9-202ENST00000616887 C5orf47Q569G3 176 aa8.58□□□□□ -1.04
PCDHGA9-202ENST00000616887 MEIG1Q5JSS6 88 aa8.58□□□□□ -1.04
PCDHGA9-202ENST00000616887 RHPN1-AS1Q9BWJ2 59 aa8.58□□□□□ -1.04
PCDHGA9-202ENST00000616887 LINC01546A6NGU7 62 aa8.58□□□□□ -1.04
PCDHGA9-202ENST00000616887 H3BUA1 57 aa8.58□□□□□ -1.04
PCDHGA9-202ENST00000616887 SOCS3O14543 225 aa8.58□□□□□ -1.04
PCDHGA9-202ENST00000616887 IGLC6P0CF74 106 aa8.58□□□□□ -1.04
PCDHGA9-202ENST00000616887 TMEM78Q5T7P6 136 aa8.58□□□□□ -1.04
PCDHGA9-202ENST00000616887 WFDC11Q8NEX6 87 aa8.58□□□□□ -1.04
PCDHGA9-202ENST00000616887 FSHBP01225 129 aa8.57□□□□□ -1.04
PCDHGA9-202ENST00000616887 MTORP42345 2549 aa8.57□□□□□ -1.04
PCDHGA9-202ENST00000616887 LINC01619G3V211 115 aa8.57□□□□□ -1.04
PCDHGA9-202ENST00000616887 SCGB1C2P0DMR2 95 aa8.57□□□□□ -1.04
PCDHGA9-202ENST00000616887 PLNP26678 52 aa8.57□□□□□ -1.04
PCDHGA9-202ENST00000616887 UBE2D1P51668 147 aa8.57□□□□□ -1.04
PCDHGA9-202ENST00000616887 SCGB1D4Q6XE38 83 aa8.57□□□□□ -1.04
PCDHGA9-202ENST00000616887 SBSPONQ8IVN8 264 aa8.57□□□□□ -1.04
PCDHGA9-202ENST00000616887 TRAV25A0A0B4J276 109 aa8.56□□□□□ -1.04
PCDHGA9-202ENST00000616887 IGHV7-4-1A0A0J9YVY3 117 aa8.56□□□□□ -1.04
PCDHGA9-202ENST00000616887 RBAKDNA6NC62 111 aa8.56□□□□□ -1.04
PCDHGA9-202ENST00000616887 LINC01559Q495D7 138 aa8.56□□□□□ -1.04
PCDHGA9-202ENST00000616887 LYRM7Q5U5X0 104 aa8.56□□□□□ -1.04
PCDHGA9-202ENST00000616887 C9orf139Q6ZV77 190 aa8.56□□□□□ -1.04
PCDHGA9-202ENST00000616887 SORL1Q92673 2214 aa8.56□□□□□ -1.04
PCDHGA9-202ENST00000616887 C18orf65Q6ZTR6 163 aa8.56□□□□□ -1.04
PCDHGA9-202ENST00000616887 Q8N8P6 123 aa8.56□□□□□ -1.04
PCDHGA9-202ENST00000616887 PLEKHB2Q96CS7 222 aa8.56□□□□□ -1.04
PCDHGA9-202ENST00000616887 DAZ1Q9NQZ3 744 aaKnown RBP8.56□□□□□ -1.04
PCDHGA9-202ENST00000616887 Q6YL49 198 aa8.55□□□□□ -1.04
PCDHGA9-202ENST00000616887 C9orf47Q6ZRZ4 202 aa8.55□□□□□ -1.04
PCDHGA9-202ENST00000616887 ZNF702PQ9H963 129 aa8.55□□□□□ -1.04
PCDHGA9-202ENST00000616887 OTOGQ6ZRI0 2925 aa8.55□□□□□ -1.04
PCDHGA9-202ENST00000616887 ZNF815PA8K554 130 aa8.55□□□□□ -1.04
PCDHGA9-202ENST00000616887 SLC25A20O43772 301 aa8.55□□□□□ -1.04
PCDHGA9-202ENST00000616887 ASIPP42127 132 aa8.55□□□□□ -1.04
PCDHGA9-202ENST00000616887 DEFB136Q30KP8 78 aa8.55□□□□□ -1.04
PCDHGA9-202ENST00000616887 C9JAW5 83 aa8.54□□□□□ -1.04
PCDHGA9-202ENST00000616887 NDUFA11Q86Y39 141 aa8.54□□□□□ -1.04
PCDHGA9-202ENST00000616887 IGLV2-18A0A075B6J9 118 aa8.54□□□□□ -1.04
PCDHGA9-202ENST00000616887 H7C1H1 209 aa8.54□□□□□ -1.04
PCDHGA9-202ENST00000616887 CD7P09564 240 aa8.54□□□□□ -1.04
PCDHGA9-202ENST00000616887 LAGE3Q14657 143 aa8.54□□□□□ -1.04
PCDHGA9-202ENST00000616887 MRPL53Q96EL3 112 aaKnown RBP8.54□□□□□ -1.04
PCDHGA9-202ENST00000616887 PRADC1Q9BSG0 188 aa8.54□□□□□ -1.04
PCDHGA9-202ENST00000616887 F8VRH5 84 aa8.53□□□□□ -1.04
PCDHGA9-202ENST00000616887 SYNJ2BPP57105 145 aa8.53□□□□□ -1.04
PCDHGA9-202ENST00000616887 ZFAND2AQ8N6M9 145 aa8.53□□□□□ -1.04
PCDHGA9-202ENST00000616887 RASL10AQ92737 203 aa8.53□□□□□ -1.04
PCDHGA9-202ENST00000616887 ANK3Q12955 4377 aaKnown RBP8.53□□□□□ -1.04
PCDHGA9-202ENST00000616887 IGHV4OR15-8A0A075B7B6 117 aa8.53□□□□□ -1.04
PCDHGA9-202ENST00000616887 A0A087WW49 117 aa8.53□□□□□ -1.04
PCDHGA9-202ENST00000616887 C15orf53Q8NAA6 179 aa8.53□□□□□ -1.04
PCDHGA9-202ENST00000616887 KLHL30-AS1Q8NEE0 82 aa8.53□□□□□ -1.04
PCDHGA9-202ENST00000616887 DUX3Q96PT4 197 aa8.53□□□□□ -1.04
PCDHGA9-202ENST00000616887 TRAV26-2A0A0B4J265 109 aa8.52□□□□□ -1.05
PCDHGA9-202ENST00000616887 TRPT1Q86TN4 253 aaKnown RBP8.52□□□□□ -1.05
PCDHGA9-202ENST00000616887 NIPBLQ6KC79 2804 aaeCLIP8.52□□□□□ -1.05
PCDHGA9-202ENST00000616887 Q6Q795 121 aa8.52□□□□□ -1.05
PCDHGA9-202ENST00000616887 NTN5Q8WTR8 489 aaPredicted RBP8.52□□□□□ -1.05
PCDHGA9-202ENST00000616887 Q8N1Y9 231 aa8.51□□□□□ -1.05
PCDHGA9-202ENST00000616887 OR10J6PQ8NGY7 276 aa8.51□□□□□ -1.05
PCDHGA9-202ENST00000616887 DCANP1Q8TF63 244 aa8.51□□□□□ -1.05
PCDHGA9-202ENST00000616887 ODF3Q96PU9 254 aa8.51□□□□□ -1.05
PCDHGA9-202ENST00000616887 ZNF580Q9UK33 172 aa8.51□□□□□ -1.05
PCDHGA9-202ENST00000616887 CFC1BP0CG36 223 aa8.51□□□□□ -1.05
PCDHGA9-202ENST00000616887 CFC1P0CG37 223 aa8.51□□□□□ -1.05
PCDHGA9-202ENST00000616887 CHCHD5Q9BSY4 110 aa8.51□□□□□ -1.05
PCDHGA9-202ENST00000616887 CNFNQ9BYD5 112 aa8.51□□□□□ -1.05
PCDHGA9-202ENST00000616887 MAST4O15021 2626 aa8.5□□□□□ -1.05
PCDHGA9-202ENST00000616887 WIPF1O43516 503 aa8.5□□□□□ -1.05
PCDHGA9-202ENST00000616887 IGKV3-20P01619 116 aa8.5□□□□□ -1.05
PCDHGA9-202ENST00000616887 RNASE4P34096 147 aaKnown RBP8.5□□□□□ -1.05
PCDHGA9-202ENST00000616887 SRSF2Q01130 221 aaKnown RBP8.5□□□□□ -1.05
PCDHGA9-202ENST00000616887 CSDC2Q9Y534 153 aaKnown RBP8.5□□□□□ -1.05
PCDHGA9-202ENST00000616887 WNK1Q9H4A3 2382 aa8.5□□□□□ -1.05
PCDHGA9-202ENST00000616887 TRAV8-4A0A0B4J246 113 aa8.49□□□□□ -1.05
PCDHGA9-202ENST00000616887 TEX49A0A1B0GTD5 131 aa8.49□□□□□ -1.05
PCDHGA9-202ENST00000616887 HOXD3P31249 432 aaPredicted RBP8.49□□□□□ -1.05
PCDHGA9-202ENST00000616887 SLURP1P55000 103 aa8.49□□□□□ -1.05
PCDHGA9-202ENST00000616887 C10orf126Q8N4M7 172 aa8.49□□□□□ -1.05
PCDHGA9-202ENST00000616887 MDFICQ9P1T7 246 aa8.49□□□□□ -1.05
PCDHGA9-202ENST00000616887 TRAV12-1A0A0B4J245 112 aa8.49□□□□□ -1.05
PCDHGA9-202ENST00000616887 SCGB3A1Q96QR1 104 aa8.49□□□□□ -1.05
PCDHGA9-202ENST00000616887 H7C2G1 150 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms