RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 SMCO4Q9NRQ5 59 aa10.36□□□□□ -0.75
UBXN1-218ENST00000616865 GATA1P15976 413 aaPredicted RBP10.35□□□□□ -0.75
UBXN1-218ENST00000616865 TMEM88Q6PEY1 159 aa10.35□□□□□ -0.75
UBXN1-218ENST00000616865 TMEM191AQ9H0A3 160 aa10.35□□□□□ -0.75
UBXN1-218ENST00000616865 H7C1H1 209 aa10.34□□□□□ -0.75
UBXN1-218ENST00000616865 CRYBA4P53673 196 aa10.34□□□□□ -0.75
UBXN1-218ENST00000616865 RHOHQ15669 191 aa10.34□□□□□ -0.75
UBXN1-218ENST00000616865 UFSP1Q6NVU6 142 aa10.34□□□□□ -0.75
UBXN1-218ENST00000616865 KIF25-AS1Q9Y6Z4 181 aa10.34□□□□□ -0.75
UBXN1-218ENST00000616865 LRP1BQ9NZR2 4599 aa10.34□□□□□ -0.75
UBXN1-218ENST00000616865 TRBV6-4A0A1B0GX49 114 aa10.33□□□□□ -0.76
UBXN1-218ENST00000616865 A0A1B0GXF2 115 aa10.33□□□□□ -0.76
UBXN1-218ENST00000616865 K7EQD1 137 aa10.33□□□□□ -0.76
UBXN1-218ENST00000616865 NUDT3O95989 172 aa10.33□□□□□ -0.76
UBXN1-218ENST00000616865 C1orf134Q5TEV5 83 aa10.33□□□□□ -0.76
UBXN1-218ENST00000616865 SLC25A29Q8N8R3 303 aa10.33□□□□□ -0.76
UBXN1-218ENST00000616865 GYPEP15421 78 aa10.32□□□□□ -0.76
UBXN1-218ENST00000616865 RASL11AQ6T310 242 aa10.32□□□□□ -0.76
UBXN1-218ENST00000616865 Q6ZSN1 163 aa10.32□□□□□ -0.76
UBXN1-218ENST00000616865 CBLN2Q8IUK8 224 aa10.32□□□□□ -0.76
UBXN1-218ENST00000616865 AMN1Q8IY45 258 aa10.32□□□□□ -0.76
UBXN1-218ENST00000616865 C15orf53Q8NAA6 179 aa10.32□□□□□ -0.76
UBXN1-218ENST00000616865 ICOSQ9Y6W8 199 aa10.32□□□□□ -0.76
UBXN1-218ENST00000616865 COX19Q49B96 90 aa10.31□□□□□ -0.76
UBXN1-218ENST00000616865 SUMO4Q6EEV6 95 aa10.31□□□□□ -0.76
UBXN1-218ENST00000616865 TGIF2-C20orf24A0A0A6YYL0 155 aa10.3□□□□□ -0.76
UBXN1-218ENST00000616865 H3BNG1 76 aa10.3□□□□□ -0.76
UBXN1-218ENST00000616865 RAB4AP20338 218 aa10.3□□□□□ -0.76
UBXN1-218ENST00000616865 LINC00315P59091 139 aa10.3□□□□□ -0.76
UBXN1-218ENST00000616865 ELOBQ15370 118 aa10.3□□□□□ -0.76
UBXN1-218ENST00000616865 MRPL23Q16540 153 aaKnown RBP10.3□□□□□ -0.76
UBXN1-218ENST00000616865 FAM104BQ5XKR9 115 aa10.3□□□□□ -0.76
UBXN1-218ENST00000616865 VSIG2Q96IQ7 327 aa10.3□□□□□ -0.76
UBXN1-218ENST00000616865 TRAV26-2A0A0B4J265 109 aa10.29□□□□□ -0.76
UBXN1-218ENST00000616865 TRBV10-1A0A0K0K1A3 114 aa10.29□□□□□ -0.76
UBXN1-218ENST00000616865 LOC100131303A0A0U1RQF7 123 aa10.29□□□□□ -0.76
UBXN1-218ENST00000616865 GAGE12JA6NER3 117 aa10.29□□□□□ -0.76
UBXN1-218ENST00000616865 SRIP30626 198 aa10.29□□□□□ -0.76
UBXN1-218ENST00000616865 RPL36AP83881 106 aaKnown RBP10.29□□□□□ -0.76
UBXN1-218ENST00000616865 GAGE1Q13065 139 aa10.29□□□□□ -0.76
UBXN1-218ENST00000616865 GAGE4Q13068 117 aa10.29□□□□□ -0.76
UBXN1-218ENST00000616865 GAGE5Q13069 117 aa10.29□□□□□ -0.76
UBXN1-218ENST00000616865 GAGE13Q4V321 117 aa10.29□□□□□ -0.76
UBXN1-218ENST00000616865 GATD1Q8NB37 220 aa10.29□□□□□ -0.76
UBXN1-218ENST00000616865 FRZBQ92765 325 aa10.29□□□□□ -0.76
UBXN1-218ENST00000616865 RPL36ALQ969Q0 106 aaKnown RBP10.29□□□□□ -0.76
UBXN1-218ENST00000616865 MRAP2Q96G30 205 aa10.29□□□□□ -0.76
UBXN1-218ENST00000616865 TNFRSF18Q9Y5U5 241 aa10.29□□□□□ -0.76
UBXN1-218ENST00000616865 APOBP04114 4563 aaKnown RBP10.28□□□□□ -0.76
UBXN1-218ENST00000616865 CDK2AP2O75956 126 aa10.28□□□□□ -0.76
UBXN1-218ENST00000616865 CKS2P33552 79 aa10.28□□□□□ -0.76
UBXN1-218ENST00000616865 SH2D6Q7Z4S9 175 aa10.28□□□□□ -0.76
UBXN1-218ENST00000616865 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.28□□□□□ -0.76
UBXN1-218ENST00000616865 RNF185Q96GF1 192 aa10.28□□□□□ -0.76
UBXN1-218ENST00000616865 TRBV24-1A0A075B6N3 115 aa10.27□□□□□ -0.77
UBXN1-218ENST00000616865 C16orf90A8MZG2 172 aa10.27□□□□□ -0.77
UBXN1-218ENST00000616865 M0QY20 66 aa10.27□□□□□ -0.77
UBXN1-218ENST00000616865 SCO1O75880 301 aa10.27□□□□□ -0.77
UBXN1-218ENST00000616865 HLA-DQA1P01909 254 aa10.27□□□□□ -0.77
UBXN1-218ENST00000616865 APCSP02743 223 aa10.27□□□□□ -0.77
UBXN1-218ENST00000616865 TNP2Q05952 138 aa10.27□□□□□ -0.77
UBXN1-218ENST00000616865 MRPL51Q4U2R6 128 aaKnown RBP10.27□□□□□ -0.77
UBXN1-218ENST00000616865 OR10J3Q5JRS4 329 aa10.27□□□□□ -0.77
UBXN1-218ENST00000616865 TMEM136Q6ZRR5 245 aa10.27□□□□□ -0.77
UBXN1-218ENST00000616865 ZNRF2Q8NHG8 242 aa10.27□□□□□ -0.77
UBXN1-218ENST00000616865 DNAJC30Q96LL9 226 aa10.27□□□□□ -0.77
UBXN1-218ENST00000616865 GNB1LQ9BYB4 327 aa10.27□□□□□ -0.77
UBXN1-218ENST00000616865 NIT2Q9NQR4 276 aa10.27□□□□□ -0.77
UBXN1-218ENST00000616865 TRBV7-3A0A075B6L6 115 aa10.26□□□□□ -0.77
UBXN1-218ENST00000616865 A0A096LPF7 62 aa10.26□□□□□ -0.77
UBXN1-218ENST00000616865 NCR2O95944 276 aa10.26□□□□□ -0.77
UBXN1-218ENST00000616865 PPP1R17O96001 155 aa10.26□□□□□ -0.77
UBXN1-218ENST00000616865 MT-ND6P03923 174 aa10.26□□□□□ -0.77
UBXN1-218ENST00000616865 NEGR1Q7Z3B1 354 aa10.26□□□□□ -0.77
UBXN1-218ENST00000616865 NEXN-AS1Q8NBZ9 246 aa10.26□□□□□ -0.77
UBXN1-218ENST00000616865 SMKR1H3BMG3 65 aa10.25□□□□□ -0.77
UBXN1-218ENST00000616865 PPBPP02775 128 aa10.25□□□□□ -0.77
UBXN1-218ENST00000616865 MAPKAPK5-AS1Q8N8E1 139 aa10.25□□□□□ -0.77
UBXN1-218ENST00000616865 ATP6V0E2Q8NHE4 81 aa10.25□□□□□ -0.77
UBXN1-218ENST00000616865 NBDYA0A0U1RRE5 68 aa10.24□□□□□ -0.77
UBXN1-218ENST00000616865 D6R8Y8 96 aa10.24□□□□□ -0.77
UBXN1-218ENST00000616865 FABP9Q0Z7S8 132 aa10.24□□□□□ -0.77
UBXN1-218ENST00000616865 ORMDL3Q8N138 153 aa10.24□□□□□ -0.77
UBXN1-218ENST00000616865 C6orf223Q8N319 242 aa10.24□□□□□ -0.77
UBXN1-218ENST00000616865 RPL39LQ96EH5 51 aaKnown RBP10.24□□□□□ -0.77
UBXN1-218ENST00000616865 MRPL18Q9H0U6 180 aaKnown RBP10.24□□□□□ -0.77
UBXN1-218ENST00000616865 ST20Q9HBF5 79 aa10.24□□□□□ -0.77
UBXN1-218ENST00000616865 TRAPPC1Q9Y5R8 145 aa10.24□□□□□ -0.77
UBXN1-218ENST00000616865 DNAH5Q8TE73 4624 aa10.24□□□□□ -0.77
UBXN1-218ENST00000616865 PRELID3AQ96N28 172 aa10.23□□□□□ -0.77
UBXN1-218ENST00000616865 YPEL4Q96NS1 127 aa10.23□□□□□ -0.77
UBXN1-218ENST00000616865 Q9UF83 564 aa10.23□□□□□ -0.77
UBXN1-218ENST00000616865 CCL18P55774 89 aa10.22□□□□□ -0.77
UBXN1-218ENST00000616865 UBE2D3P61077 147 aa10.22□□□□□ -0.77
UBXN1-218ENST00000616865 UBE2D2P62837 147 aa10.22□□□□□ -0.77
UBXN1-218ENST00000616865 KIAA1644Q3SXP7 199 aa10.22□□□□□ -0.77
UBXN1-218ENST00000616865 RPS10P46783 165 aaKnown RBP10.21□□□□□ -0.77
UBXN1-218ENST00000616865 DAZ4Q86SG3 579 aaKnown RBP10.21□□□□□ -0.77
UBXN1-218ENST00000616865 DAZ3Q9NR90 486 aaKnown RBP10.21□□□□□ -0.77
UBXN1-218ENST00000616865 IGHV3-38A0A0C4DH36 116 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms