RNA–Protein interactions for RNA: ENST00000616401.1

SOX2-OT-236, SOX2 overlapping transcript, humanhuman

Gene SOX2-OT, Length 69 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-236ENST00000616401 OR5B3Q8NH48 314 aa-1.87□□□□□ -2.71
SOX2-OT-236ENST00000616401 AGR3Q8TD06 166 aa-1.87□□□□□ -2.71
SOX2-OT-236ENST00000616401 LCN9Q8WX39 176 aa-1.87□□□□□ -2.71
SOX2-OT-236ENST00000616401 IFT81Q8WYA0 676 aa-1.87□□□□□ -2.71
SOX2-OT-236ENST00000616401 TSLPQ969D9 159 aa-1.87□□□□□ -2.71
SOX2-OT-236ENST00000616401 CERS2Q96G23 380 aa-1.87□□□□□ -2.71
SOX2-OT-236ENST00000616401 CCDC77Q9BR77 488 aa-1.87□□□□□ -2.71
SOX2-OT-236ENST00000616401 OR51M1Q9H341 326 aa-1.87□□□□□ -2.71
SOX2-OT-236ENST00000616401 C11orf68Q9H3H3 251 aaKnown RBP-1.87□□□□□ -2.71
SOX2-OT-236ENST00000616401 RGCCQ9H4X1 137 aa-1.87□□□□□ -2.71
SOX2-OT-236ENST00000616401 CHRAC1Q9NRG0 131 aa-1.87□□□□□ -2.71
SOX2-OT-236ENST00000616401 DNAJB9Q9UBS3 223 aa-1.87□□□□□ -2.71
SOX2-OT-236ENST00000616401 TCEAL9Q9UHQ7 104 aa-1.87□□□□□ -2.71
SOX2-OT-236ENST00000616401 MAD2L2Q9UI95 211 aa-1.87□□□□□ -2.71
SOX2-OT-236ENST00000616401 LIPT1Q9Y234 373 aa-1.87□□□□□ -2.71
SOX2-OT-236ENST00000616401 CFL2Q9Y281 166 aa-1.87□□□□□ -2.71
SOX2-OT-236ENST00000616401 KIAA0586Q9BVV6 1533 aa-1.87□□□□□ -2.71
SOX2-OT-236ENST00000616401 TARBP1Q13395 1621 aaKnown RBP-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 MAP3K4Q9Y6R4 1608 aa-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 NCAPD3P42695 1498 aa-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 LRRC9Q6ZRR7 1453 aa-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 ITSN1Q15811 1721 aa-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 TRAV5A0A0B4J249 113 aa-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 A0A0U1RRA0 63 aa-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 hCG_1807616A0A1W2PRN6 198 aa-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 SNTNA6NMZ2 147 aa-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 ZNF593O00488 134 aaPredicted RBP-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 ATP6V1G1O75348 118 aa-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 CRCPO75575 148 aa-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 SCGB1D1O95968 90 aa-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 LIMS3P0CW19 117 aa-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 LIMS4P0CW20 117 aa-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 KCNE1P15382 129 aa-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 HIST1H1DP16402 221 aaKnown RBP-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 S100A4P26447 101 aaKnown RBP-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 SLC1A1P43005 524 aa-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 HADHBP55084 474 aaKnown RBP-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 CARD18P57730 90 aa-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 RAB5BP61020 215 aa-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 DAD1P61803 113 aa-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 SSX2Q16385 188 aa-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 GUK1Q16774 197 aa-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 EXOC3L4Q17RC7 722 aa-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 SPANXN2Q5MJ10 180 aa-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 CST9Q5W186 159 aa-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 SPESP1Q6UW49 350 aa-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 C5orf46Q6UWT4 87 aa-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 SYS1Q8N2H4 156 aa-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 ZNF321PQ8N8H1 164 aa-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 OR51D1Q8NGF3 324 aa-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 SVIPQ8NHG7 77 aa-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 GLYATL2Q8WU03 294 aa-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 FAM172AQ8WUF8 416 aa-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 HVCN1Q96D96 273 aa-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 CCDC126Q96EE4 140 aa-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 TEX37Q96LM6 180 aa-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 SCGB3A2Q96PL1 93 aa-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 AQP10Q96PS8 301 aa-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 CRB3Q9BUF7 120 aa-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 HDHD2Q9H0R4 259 aa-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 GEMIN7Q9H840 131 aaKnown RBP-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 TMEM165Q9HC07 324 aa-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 TAGLN3Q9UI15 199 aa-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 BLOC1S6Q9UL45 172 aa-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 LSM2Q9Y333 95 aaKnown RBP-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 TPRKBQ9Y3C4 175 aa-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 LENEPQ9Y5L5 61 aa-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 V9GYQ6 96 aa-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 NHSQ6T4R5 1651 aa-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 FAM208AQ9UK61 1670 aaKnown RBP-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 MYH4Q9Y623 1939 aa-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 NALCNQ8IZF0 1738 aa-1.88□□□□□ -2.71
SOX2-OT-236ENST00000616401 EVC2Q86UK5 1308 aa-1.89□□□□□ -2.71
SOX2-OT-236ENST00000616401 NWD1Q149M9 1564 aa-1.89□□□□□ -2.71
SOX2-OT-236ENST00000616401 UACAQ9BZF9 1416 aa-1.89□□□□□ -2.71
SOX2-OT-236ENST00000616401 EHBP1L1Q8N3D4 1523 aa-1.89□□□□□ -2.71
SOX2-OT-236ENST00000616401 RAB19A4D1S5 217 aa-1.89□□□□□ -2.71
SOX2-OT-236ENST00000616401 SMCO2A6NFE2 343 aa-1.89□□□□□ -2.71
SOX2-OT-236ENST00000616401 MGAT4DA6NG13 374 aa-1.89□□□□□ -2.71
SOX2-OT-236ENST00000616401 CCDC179H3BU77 68 aa-1.89□□□□□ -2.71
SOX2-OT-236ENST00000616401 EDF1O60869 148 aaKnown RBP-1.89□□□□□ -2.71
SOX2-OT-236ENST00000616401 ATP5HO75947 161 aa-1.89□□□□□ -2.71
SOX2-OT-236ENST00000616401 HBZP02008 142 aa-1.89□□□□□ -2.71
SOX2-OT-236ENST00000616401 SLC25A6P12236 298 aa-1.89□□□□□ -2.71
SOX2-OT-236ENST00000616401 ARL3P36405 182 aa-1.89□□□□□ -2.71
SOX2-OT-236ENST00000616401 SULT1E1P49888 294 aa-1.89□□□□□ -2.71
SOX2-OT-236ENST00000616401 NDUFA6P56556 154 aa-1.89□□□□□ -2.71
SOX2-OT-236ENST00000616401 AP3S2P59780 193 aa-1.89□□□□□ -2.71
SOX2-OT-236ENST00000616401 PSMC5P62195 406 aa-1.89□□□□□ -2.71
SOX2-OT-236ENST00000616401 TFAMQ00059 246 aaKnown RBP-1.89□□□□□ -2.71
SOX2-OT-236ENST00000616401 YWHAHQ04917 246 aaPredicted RBP-1.89□□□□□ -2.71
SOX2-OT-236ENST00000616401 CARTPTQ16568 116 aa-1.89□□□□□ -2.71
SOX2-OT-236ENST00000616401 NKAIN1Q4KMZ8 207 aa-1.89□□□□□ -2.71
SOX2-OT-236ENST00000616401 BEX5Q5H9J7 111 aa-1.89□□□□□ -2.71
SOX2-OT-236ENST00000616401 PSMG4Q5JS54 123 aa-1.89□□□□□ -2.71
SOX2-OT-236ENST00000616401 RPL7L1Q6DKI1 246 aaKnown RBP-1.89□□□□□ -2.71
SOX2-OT-236ENST00000616401 ATP5L2Q7Z4Y8 100 aa-1.89□□□□□ -2.71
SOX2-OT-236ENST00000616401 HOOK3Q86VS8 718 aa-1.89□□□□□ -2.71
SOX2-OT-236ENST00000616401 CMTM1Q8IZ96 169 aa-1.89□□□□□ -2.71
SOX2-OT-236ENST00000616401 ST13P4Q8IZP2 240 aaPredicted RBP-1.89□□□□□ -2.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms