RNA–Protein interactions for RNA: ENST00000611855.4

CDH4-202, Transcript of cadherin 4, humanhuman

TSL 5 BASIC

Gene CDH4, Length 3,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-202ENST00000611855 UBTD1Q9HAC8 227 aa8.28□□□□□ -1.08
CDH4-202ENST00000611855 M0QXV9 152 aa8.27□□□□□ -1.09
CDH4-202ENST00000611855 RNASE3P12724 160 aaKnown RBP8.27□□□□□ -1.09
CDH4-202ENST00000611855 TNFRSF18Q9Y5U5 241 aa8.27□□□□□ -1.09
CDH4-202ENST00000611855 TRBV10-2A0A0K0K1G8 114 aa8.27□□□□□ -1.09
CDH4-202ENST00000611855 FAM236AA0A1B0GUQ0 79 aa8.27□□□□□ -1.09
CDH4-202ENST00000611855 FAM236BA0A1B0GV22 79 aa8.27□□□□□ -1.09
CDH4-202ENST00000611855 LGALS9O00182 355 aa8.27□□□□□ -1.09
CDH4-202ENST00000611855 VPREB3Q9UKI3 123 aa8.27□□□□□ -1.09
CDH4-202ENST00000611855 C2CD3Q4AC94 2353 aa8.27□□□□□ -1.09
CDH4-202ENST00000611855 TRAV8-3A0A0A6YYJ7 113 aa8.26□□□□□ -1.09
CDH4-202ENST00000611855 ZNF22P17026 224 aaPredicted RBP8.26□□□□□ -1.09
CDH4-202ENST00000611855 SPXQ9BT56 116 aa8.26□□□□□ -1.09
CDH4-202ENST00000611855 TRAV12-3A0A0B4J271 114 aa8.26□□□□□ -1.09
CDH4-202ENST00000611855 SDHAF1A6NFY7 115 aa8.26□□□□□ -1.09
CDH4-202ENST00000611855 IGIPA6NJ69 53 aa8.26□□□□□ -1.09
CDH4-202ENST00000611855 UBE2E1P51965 193 aa8.26□□□□□ -1.09
CDH4-202ENST00000611855 EBI3Q14213 229 aa8.26□□□□□ -1.09
CDH4-202ENST00000611855 TRGV11A0A075B6L2 103 aa8.25□□□□□ -1.09
CDH4-202ENST00000611855 LOC107984640A0A0U1RRK4 108 aa8.25□□□□□ -1.09
CDH4-202ENST00000611855 LY6EQ16553 131 aa8.25□□□□□ -1.09
CDH4-202ENST00000611855 SUMO4Q6EEV6 95 aa8.25□□□□□ -1.09
CDH4-202ENST00000611855 BRD3OSQ6XYD6 125 aa8.25□□□□□ -1.09
CDH4-202ENST00000611855 A0A0J9YXV3 536 aa8.25□□□□□ -1.09
CDH4-202ENST00000611855 IGF2-ASQ6U949 168 aa8.25□□□□□ -1.09
CDH4-202ENST00000611855 H7C423 109 aa8.24□□□□□ -1.09
CDH4-202ENST00000611855 Q6Q795 121 aa8.24□□□□□ -1.09
CDH4-202ENST00000611855 C9orf139Q6ZV77 190 aa8.24□□□□□ -1.09
CDH4-202ENST00000611855 ITLN2Q8WWU7 325 aaPredicted RBP8.24□□□□□ -1.09
CDH4-202ENST00000611855 LINC00477Q96M19 166 aa8.24□□□□□ -1.09
CDH4-202ENST00000611855 AMELXQ99217 191 aa8.24□□□□□ -1.09
CDH4-202ENST00000611855 CENPEQ02224 2701 aa8.24□□□□□ -1.09
CDH4-202ENST00000611855 OOSP1A8MZH6 123 aa8.24□□□□□ -1.09
CDH4-202ENST00000611855 LINC00694P0DN24 101 aa8.24□□□□□ -1.09
CDH4-202ENST00000611855 RNASE13Q5GAN3 156 aaKnown RBP8.24□□□□□ -1.09
CDH4-202ENST00000611855 C9orf153Q5TBE3 101 aa8.24□□□□□ -1.09
CDH4-202ENST00000611855 MINOS1Q5TGZ0 78 aa8.24□□□□□ -1.09
CDH4-202ENST00000611855 CEMP1Q6PRD7 247 aaPredicted RBP8.24□□□□□ -1.09
CDH4-202ENST00000611855 KLK5Q9Y337 293 aaPredicted RBP8.24□□□□□ -1.09
CDH4-202ENST00000611855 MINOS1-NBL1R4GNA1 71 aa8.24□□□□□ -1.09
CDH4-202ENST00000611855 PRRC2AP48634 2157 aaKnown RBP8.24□□□□□ -1.09
CDH4-202ENST00000611855 CELSR2Q9HCU4 2923 aa8.24□□□□□ -1.09
CDH4-202ENST00000611855 TRAV12-2A0A075B6T6 113 aa8.24□□□□□ -1.09
CDH4-202ENST00000611855 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.24□□□□□ -1.09
CDH4-202ENST00000611855 A0A1W2PPR1 153 aa8.24□□□□□ -1.09
CDH4-202ENST00000611855 SIRPDQ9H106 197 aa8.24□□□□□ -1.09
CDH4-202ENST00000611855 ABCA2Q9BZC7 2435 aa8.23□□□□□ -1.09
CDH4-202ENST00000611855 CSMD2Q7Z408 3487 aa8.23□□□□□ -1.09
CDH4-202ENST00000611855 TRBV7-1A0A0A6YYK4 115 aa8.23□□□□□ -1.09
CDH4-202ENST00000611855 COX6CP09669 75 aa8.23□□□□□ -1.09
CDH4-202ENST00000611855 P0DMU3 169 aa8.23□□□□□ -1.09
CDH4-202ENST00000611855 FAM231AP0DMU4 169 aa8.23□□□□□ -1.09
CDH4-202ENST00000611855 FAM231CP0DMU5 169 aa8.23□□□□□ -1.09
CDH4-202ENST00000611855 U3KQE9 123 aa8.23□□□□□ -1.09
CDH4-202ENST00000611855 MYO18BQ8IUG5 2567 aa8.23□□□□□ -1.09
CDH4-202ENST00000611855 TRAV41A0A0B4J266 112 aa8.23□□□□□ -1.09
CDH4-202ENST00000611855 ATP5J2P56134 94 aa8.23□□□□□ -1.09
CDH4-202ENST00000611855 A0A0B4J2C4 111 aa8.23□□□□□ -1.09
CDH4-202ENST00000611855 M0R2P5 195 aa8.23□□□□□ -1.09
CDH4-202ENST00000611855 VCYO14598 125 aa8.23□□□□□ -1.09
CDH4-202ENST00000611855 LINC00315P59091 139 aa8.23□□□□□ -1.09
CDH4-202ENST00000611855 ZNF876PQ49A33 203 aa8.23□□□□□ -1.09
CDH4-202ENST00000611855 DAND5Q8N907 189 aa8.23□□□□□ -1.09
CDH4-202ENST00000611855 MRPL53Q96EL3 112 aaKnown RBP8.23□□□□□ -1.09
CDH4-202ENST00000611855 ICOSQ9Y6W8 199 aa8.23□□□□□ -1.09
CDH4-202ENST00000611855 CFAP46Q8IYW2 2715 aa8.22□□□□□ -1.09
CDH4-202ENST00000611855 A0A0U1RRA0 63 aa8.22□□□□□ -1.09
CDH4-202ENST00000611855 A8MZ25 164 aa8.22□□□□□ -1.09
CDH4-202ENST00000611855 DUX5Q96PT3 197 aa8.22□□□□□ -1.09
CDH4-202ENST00000611855 RPL13AP40429 203 aaKnown RBP8.22□□□□□ -1.09
CDH4-202ENST00000611855 MDFICQ9P1T7 246 aa8.22□□□□□ -1.09
CDH4-202ENST00000611855 IGHV1-69DA0A0B4J2H0 117 aa8.21□□□□□ -1.09
CDH4-202ENST00000611855 LEPROTO15243 131 aa8.21□□□□□ -1.09
CDH4-202ENST00000611855 HTN1P15515 57 aa8.21□□□□□ -1.09
CDH4-202ENST00000611855 C5orf56Q8N8D9 126 aa8.21□□□□□ -1.09
CDH4-202ENST00000611855 TMEM141Q96I45 108 aa8.21□□□□□ -1.09
CDH4-202ENST00000611855 A0A0J9YXY3 114 aa8.21□□□□□ -1.1
CDH4-202ENST00000611855 PPP1R17O96001 155 aa8.21□□□□□ -1.1
CDH4-202ENST00000611855 PF4V1P10720 104 aa8.21□□□□□ -1.1
CDH4-202ENST00000611855 TMEM101Q96IK0 257 aa8.21□□□□□ -1.1
CDH4-202ENST00000611855 LINC01587Q99440 93 aa8.21□□□□□ -1.1
CDH4-202ENST00000611855 RS1O15537 224 aa8.21□□□□□ -1.1
CDH4-202ENST00000611855 BPESC1Q9GZL8 116 aa8.21□□□□□ -1.1
CDH4-202ENST00000611855 KLK9Q9UKQ9 250 aa8.21□□□□□ -1.1
CDH4-202ENST00000611855 KIF25-AS1Q9Y6Z4 181 aa8.21□□□□□ -1.1
CDH4-202ENST00000611855 IGHV3-73A0A0B4J1V6 119 aa8.2□□□□□ -1.1
CDH4-202ENST00000611855 TMEM223A0PJW6 202 aa8.2□□□□□ -1.1
CDH4-202ENST00000611855 OVOL1O14753 267 aa8.2□□□□□ -1.1
CDH4-202ENST00000611855 POLR2KP53803 58 aaKnown RBP8.2□□□□□ -1.1
CDH4-202ENST00000611855 RHPN1-AS1Q9BWJ2 59 aa8.2□□□□□ -1.1
CDH4-202ENST00000611855 USP9YO00507 2555 aaPredicted RBP8.2□□□□□ -1.1
CDH4-202ENST00000611855 NPFFO15130 113 aa8.19□□□□□ -1.1
CDH4-202ENST00000611855 TIMM17AQ99595 171 aa8.19□□□□□ -1.1
CDH4-202ENST00000611855 TRBV30A0A0K0K1B3 111 aa8.19□□□□□ -1.1
CDH4-202ENST00000611855 SOCS3O14543 225 aa8.19□□□□□ -1.1
CDH4-202ENST00000611855 ADAMTSL4-AS1Q5T5F5 129 aa8.19□□□□□ -1.1
CDH4-202ENST00000611855 C11orf71Q6IPW1 123 aa8.19□□□□□ -1.1
CDH4-202ENST00000611855 FLNCQ14315 2725 aa8.19□□□□□ -1.1
CDH4-202ENST00000611855 IGHV3-30-3P0DP02 117 aa8.19□□□□□ -1.1
CDH4-202ENST00000611855 TMEM126AQ9H061 195 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms