RNA–Protein interactions for RNA: ENST00000611577.4

MUC1-224, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-224ENST00000611577 EVI2AP22794 236 aa12.11□□□□□ -0.47
MUC1-224ENST00000611577 RPL36AP83881 106 aaKnown RBP12.11□□□□□ -0.47
MUC1-224ENST00000611577 PNRC1Q12796 327 aaPredicted RBP12.11□□□□□ -0.47
MUC1-224ENST00000611577 RPL36ALQ969Q0 106 aaKnown RBP12.11□□□□□ -0.47
MUC1-224ENST00000611577 UPK3BQ9BT76 320 aa12.11□□□□□ -0.47
MUC1-224ENST00000611577 Q9H8V8 135 aa12.11□□□□□ -0.47
MUC1-224ENST00000611577 TRBV10-1A0A0K0K1A3 114 aa12.1□□□□□ -0.47
MUC1-224ENST00000611577 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.1□□□□□ -0.47
MUC1-224ENST00000611577 CNFNQ9BYD5 112 aa12.1□□□□□ -0.47
MUC1-224ENST00000611577 NAT8BQ9UHF3 227 aa12.1□□□□□ -0.47
MUC1-224ENST00000611577 A0A1B0GUT8 65 aa12.09□□□□□ -0.47
MUC1-224ENST00000611577 F8W036 122 aa12.09□□□□□ -0.47
MUC1-224ENST00000611577 H7C1H1 209 aa12.09□□□□□ -0.47
MUC1-224ENST00000611577 FOXA3P55318 350 aaPredicted RBP12.09□□□□□ -0.47
MUC1-224ENST00000611577 KIF25-AS1Q9Y6Z4 181 aa12.09□□□□□ -0.47
MUC1-224ENST00000611577 TRAV8-6A0A0B4J262 113 aa12.08□□□□□ -0.48
MUC1-224ENST00000611577 PPP1R2P9O14990 202 aa12.08□□□□□ -0.48
MUC1-224ENST00000611577 SIVA1O15304 175 aa12.08□□□□□ -0.48
MUC1-224ENST00000611577 GTSF1LQ9H1H1 148 aa12.08□□□□□ -0.48
MUC1-224ENST00000611577 TRBV7-3A0A075B6L6 115 aa12.07□□□□□ -0.48
MUC1-224ENST00000611577 TMEM218A2RU14 115 aa12.07□□□□□ -0.48
MUC1-224ENST00000611577 RIGQ13278 110 aa12.07□□□□□ -0.48
MUC1-224ENST00000611577 TTC32Q5I0X7 151 aa12.07□□□□□ -0.48
MUC1-224ENST00000611577 OR10J3Q5JRS4 329 aa12.07□□□□□ -0.48
MUC1-224ENST00000611577 KRTAP1-5Q9BYS1 174 aa12.07□□□□□ -0.48
MUC1-224ENST00000611577 Q9UF83 564 aa12.07□□□□□ -0.48
MUC1-224ENST00000611577 LINC00862A6NCI5 91 aa12.06□□□□□ -0.48
MUC1-224ENST00000611577 MT-ND4LP03901 98 aa12.06□□□□□ -0.48
MUC1-224ENST00000611577 TIRAPP58753 221 aa12.06□□□□□ -0.48
MUC1-224ENST00000611577 KRTAP10-2P60368 255 aa12.06□□□□□ -0.48
MUC1-224ENST00000611577 SUMO4Q6EEV6 95 aa12.06□□□□□ -0.48
MUC1-224ENST00000611577 NEXN-AS1Q8NBZ9 246 aa12.06□□□□□ -0.48
MUC1-224ENST00000611577 NUP35Q8NFH5 326 aa12.06□□□□□ -0.48
MUC1-224ENST00000611577 TNFRSF18Q9Y5U5 241 aa12.06□□□□□ -0.48
MUC1-224ENST00000611577 FAT1Q14517 4588 aa12.05□□□□□ -0.48
MUC1-224ENST00000611577 SMIM27A0A1W2PRY6 76 aa12.05□□□□□ -0.48
MUC1-224ENST00000611577 LINC00694P0DN24 101 aa12.05□□□□□ -0.48
MUC1-224ENST00000611577 LINC00315P59091 139 aa12.05□□□□□ -0.48
MUC1-224ENST00000611577 DMBT1Q9UGM3 2413 aaPredicted RBP12.05□□□□□ -0.48
MUC1-224ENST00000611577 LELP1Q5T871 98 aa12.04□□□□□ -0.48
MUC1-224ENST00000611577 RASL11AQ6T310 242 aa12.04□□□□□ -0.48
MUC1-224ENST00000611577 WFDC10BQ8IUB3 73 aa12.04□□□□□ -0.48
MUC1-224ENST00000611577 ANAPC16Q96DE5 110 aa12.04□□□□□ -0.48
MUC1-224ENST00000611577 TRAV9-2A0A087WT02 112 aa12.03□□□□□ -0.48
MUC1-224ENST00000611577 A0A087WWC5 75 aa12.03□□□□□ -0.48
MUC1-224ENST00000611577 M0QY20 66 aa12.03□□□□□ -0.48
MUC1-224ENST00000611577 UBE2D3P61077 147 aa12.03□□□□□ -0.48
MUC1-224ENST00000611577 UBE2D2P62837 147 aa12.03□□□□□ -0.48
MUC1-224ENST00000611577 DNAJC30Q96LL9 226 aa12.03□□□□□ -0.48
MUC1-224ENST00000611577 SEC11CQ9BY50 192 aa12.03□□□□□ -0.48
MUC1-224ENST00000611577 ADCYAP1P18509 176 aa12.02□□□□□ -0.49
MUC1-224ENST00000611577 BTF3P20290 206 aaKnown RBP12.02□□□□□ -0.49
MUC1-224ENST00000611577 IGHV3-38A0A0C4DH36 116 aa12.01□□□□□ -0.49
MUC1-224ENST00000611577 TMEM191AQ9H0A3 160 aa12.01□□□□□ -0.49
MUC1-224ENST00000611577 TRAV26-2A0A0B4J265 109 aa12□□□□□ -0.49
MUC1-224ENST00000611577 A0A1B0GW15 77 aa12□□□□□ -0.49
MUC1-224ENST00000611577 EPM2AB3EWF7 344 aa12□□□□□ -0.49
MUC1-224ENST00000611577 S100A8P05109 93 aa12□□□□□ -0.49
MUC1-224ENST00000611577 CAMPP49913 170 aa12□□□□□ -0.49
MUC1-224ENST00000611577 MRPL54Q6P161 138 aaKnown RBP12□□□□□ -0.49
MUC1-224ENST00000611577 DAZ4Q86SG3 579 aaKnown RBP12□□□□□ -0.49
MUC1-224ENST00000611577 NIT2Q9NQR4 276 aa12□□□□□ -0.49
MUC1-224ENST00000611577 DAZ3Q9NR90 486 aaKnown RBP12□□□□□ -0.49
MUC1-224ENST00000611577 URGCP-MRPS24S4R325 110 aa11.99□□□□□ -0.49
MUC1-224ENST00000611577 DNAH10OSP0CZ25 163 aa11.98□□□□□ -0.49
MUC1-224ENST00000611577 TMEM97Q5BJF2 176 aa11.98□□□□□ -0.49
MUC1-224ENST00000611577 KCNIP4Q6PIL6 250 aa11.98□□□□□ -0.49
MUC1-224ENST00000611577 GATD1Q8NB37 220 aa11.98□□□□□ -0.49
MUC1-224ENST00000611577 IGHV3-30P01768 117 aa11.97□□□□□ -0.49
MUC1-224ENST00000611577 IGHV3-33P01772 117 aa11.97□□□□□ -0.49
MUC1-224ENST00000611577 IGHV3-30-3P0DP02 117 aa11.97□□□□□ -0.49
MUC1-224ENST00000611577 IGHV3-30-5P0DP03 117 aa11.97□□□□□ -0.49
MUC1-224ENST00000611577 HBBP68871 147 aa11.97□□□□□ -0.49
MUC1-224ENST00000611577 AMN1Q8IY45 258 aa11.97□□□□□ -0.49
MUC1-224ENST00000611577 C10orf126Q8N4M7 172 aa11.97□□□□□ -0.49
MUC1-224ENST00000611577 FRZBQ92765 325 aa11.97□□□□□ -0.49
MUC1-224ENST00000611577 MYCBP2O75592 4640 aa11.96□□□□□ -0.49
MUC1-224ENST00000611577 K7EP13 123 aa11.96□□□□□ -0.49
MUC1-224ENST00000611577 NDUFA5Q16718 116 aa11.96□□□□□ -0.49
MUC1-224ENST00000611577 VPS13BQ7Z7G8 4022 aa11.96□□□□□ -0.5
MUC1-224ENST00000611577 TRBV6-8A0A0A6YYG3 113 aa11.95□□□□□ -0.5
MUC1-224ENST00000611577 INAFM2P0DMQ5 153 aa11.95□□□□□ -0.5
MUC1-224ENST00000611577 RAB4AP20338 218 aa11.95□□□□□ -0.5
MUC1-224ENST00000611577 LINC01556Q5JQF7 62 aa11.95□□□□□ -0.5
MUC1-224ENST00000611577 ATP5L2Q7Z4Y8 100 aa11.95□□□□□ -0.5
MUC1-224ENST00000611577 RPL39LQ96EH5 51 aaKnown RBP11.95□□□□□ -0.5
MUC1-224ENST00000611577 MRAP2Q96G30 205 aa11.95□□□□□ -0.5
MUC1-224ENST00000611577 CTDSP1Q9GZU7 261 aa11.95□□□□□ -0.5
MUC1-224ENST00000611577 TRBV25-1A0A075B6N4 114 aa11.94□□□□□ -0.5
MUC1-224ENST00000611577 TMEM262E9PQX1 116 aa11.94□□□□□ -0.5
MUC1-224ENST00000611577 CHCHD5Q9BSY4 110 aa11.94□□□□□ -0.5
MUC1-224ENST00000611577 CARHSP1Q9Y2V2 147 aaKnown RBP11.94□□□□□ -0.5
MUC1-224ENST00000611577 A0A087WX48 190 aa11.93□□□□□ -0.5
MUC1-224ENST00000611577 COTL1Q14019 142 aa11.93□□□□□ -0.5
MUC1-224ENST00000611577 RNF185Q96GF1 192 aa11.93□□□□□ -0.5
MUC1-224ENST00000611577 BTF3L4Q96K17 158 aa11.93□□□□□ -0.5
MUC1-224ENST00000611577 IGHV1-24A0A0C4DH33 117 aa11.92□□□□□ -0.5
MUC1-224ENST00000611577 S100PP25815 95 aa11.92□□□□□ -0.5
MUC1-224ENST00000611577 FUSP35637 526 aaKnown RBP eCLIP11.92□□□□□ -0.5
MUC1-224ENST00000611577 C10orf91Q5T1B1 145 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms