RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 FAM3BP58499 235 aaPredicted RBP5.9□□□□□ -1.46
SNCA-212ENST00000611107 GAGE1Q13065 139 aa5.9□□□□□ -1.46
SNCA-212ENST00000611107 GAGE4Q13068 117 aa5.9□□□□□ -1.46
SNCA-212ENST00000611107 GAGE5Q13069 117 aa5.9□□□□□ -1.46
SNCA-212ENST00000611107 TWIST1Q15672 202 aa5.9□□□□□ -1.46
SNCA-212ENST00000611107 GAGE13Q4V321 117 aa5.9□□□□□ -1.46
SNCA-212ENST00000611107 SUMO4Q6EEV6 95 aa5.9□□□□□ -1.46
SNCA-212ENST00000611107 LYPD5Q6UWN5 251 aa5.9□□□□□ -1.46
SNCA-212ENST00000611107 NEXN-AS1Q8NBZ9 246 aa5.9□□□□□ -1.46
SNCA-212ENST00000611107 UPK3BQ9BT76 320 aa5.9□□□□□ -1.46
SNCA-212ENST00000611107 CARHSP1Q9Y2V2 147 aaKnown RBP5.9□□□□□ -1.46
SNCA-212ENST00000611107 TRBV10-1A0A0K0K1A3 114 aa5.89□□□□□ -1.47
SNCA-212ENST00000611107 F5H697 171 aa5.89□□□□□ -1.47
SNCA-212ENST00000611107 M0QY20 66 aa5.89□□□□□ -1.47
SNCA-212ENST00000611107 Q6ZRN7 208 aaPredicted RBP5.89□□□□□ -1.47
SNCA-212ENST00000611107 C6orf223Q8N319 242 aa5.89□□□□□ -1.47
SNCA-212ENST00000611107 BORCS7Q96B45 105 aa5.89□□□□□ -1.47
SNCA-212ENST00000611107 KRTAP4-5Q9BYR2 181 aa5.89□□□□□ -1.47
SNCA-212ENST00000611107 PCLOQ9Y6V0 5065 aa5.89□□□□□ -1.47
SNCA-212ENST00000611107 TRAV26-2A0A0B4J265 109 aa5.88□□□□□ -1.47
SNCA-212ENST00000611107 A0A1B0GXF2 115 aa5.88□□□□□ -1.47
SNCA-212ENST00000611107 PPP1R2P9O14990 202 aa5.88□□□□□ -1.47
SNCA-212ENST00000611107 TIRAPP58753 221 aa5.88□□□□□ -1.47
SNCA-212ENST00000611107 KRTAP10-2P60368 255 aa5.88□□□□□ -1.47
SNCA-212ENST00000611107 UBE2D3P61077 147 aa5.88□□□□□ -1.47
SNCA-212ENST00000611107 UBE2D2P62837 147 aa5.88□□□□□ -1.47
SNCA-212ENST00000611107 SH2D6Q7Z4S9 175 aa5.88□□□□□ -1.47
SNCA-212ENST00000611107 WFDC10BQ8IUB3 73 aa5.88□□□□□ -1.47
SNCA-212ENST00000611107 ANAPC16Q96DE5 110 aa5.88□□□□□ -1.47
SNCA-212ENST00000611107 ABCA13Q86UQ4 5058 aa5.87□□□□□ -1.47
SNCA-212ENST00000611107 TRBV7-3A0A075B6L6 115 aa5.87□□□□□ -1.47
SNCA-212ENST00000611107 GAS8-AS1O95177 125 aa5.87□□□□□ -1.47
SNCA-212ENST00000611107 MT-ND4LP03901 98 aa5.87□□□□□ -1.47
SNCA-212ENST00000611107 RPL36AP83881 106 aaKnown RBP5.87□□□□□ -1.47
SNCA-212ENST00000611107 RIGQ13278 110 aa5.87□□□□□ -1.47
SNCA-212ENST00000611107 MRPL54Q6P161 138 aaKnown RBP5.87□□□□□ -1.47
SNCA-212ENST00000611107 Q8N3U1 123 aa5.87□□□□□ -1.47
SNCA-212ENST00000611107 GATD1Q8NB37 220 aa5.87□□□□□ -1.47
SNCA-212ENST00000611107 ATP6V0E2Q8NHE4 81 aa5.87□□□□□ -1.47
SNCA-212ENST00000611107 RPL36ALQ969Q0 106 aaKnown RBP5.87□□□□□ -1.47
SNCA-212ENST00000611107 RNF185Q96GF1 192 aa5.87□□□□□ -1.47
SNCA-212ENST00000611107 TMEM191AQ9H0A3 160 aa5.87□□□□□ -1.47
SNCA-212ENST00000611107 GTSF1LQ9H1H1 148 aa5.87□□□□□ -1.47
SNCA-212ENST00000611107 H7C1H1 209 aa5.86□□□□□ -1.47
SNCA-212ENST00000611107 RASL11AQ6T310 242 aa5.86□□□□□ -1.47
SNCA-212ENST00000611107 AMN1Q8IY45 258 aa5.86□□□□□ -1.47
SNCA-212ENST00000611107 RPL39LQ96EH5 51 aaKnown RBP5.86□□□□□ -1.47
SNCA-212ENST00000611107 IGHV3-38A0A0C4DH36 116 aa5.85□□□□□ -1.47
SNCA-212ENST00000611107 SIVA1O15304 175 aa5.85□□□□□ -1.47
SNCA-212ENST00000611107 RPS10P46783 165 aaKnown RBP5.85□□□□□ -1.47
SNCA-212ENST00000611107 CAMPP49913 170 aa5.85□□□□□ -1.47
SNCA-212ENST00000611107 HBBP68871 147 aa5.85□□□□□ -1.47
SNCA-212ENST00000611107 RHEBQ15382 184 aa5.85□□□□□ -1.47
SNCA-212ENST00000611107 LELP1Q5T871 98 aa5.85□□□□□ -1.47
SNCA-212ENST00000611107 SMIM15Q7Z3B0 74 aa5.85□□□□□ -1.47
SNCA-212ENST00000611107 ATP5L2Q7Z4Y8 100 aa5.85□□□□□ -1.47
SNCA-212ENST00000611107 CLRN3Q8NCR9 226 aa5.85□□□□□ -1.47
SNCA-212ENST00000611107 A0A087WWC5 75 aa5.84□□□□□ -1.47
SNCA-212ENST00000611107 A0A1B0GW15 77 aa5.84□□□□□ -1.47
SNCA-212ENST00000611107 C7orf77A4D0Y5 90 aa5.84□□□□□ -1.47
SNCA-212ENST00000611107 NCR2O95944 276 aa5.84□□□□□ -1.47
SNCA-212ENST00000611107 APOC3P02656 99 aa5.84□□□□□ -1.47
SNCA-212ENST00000611107 DNAH10OSP0CZ25 163 aa5.84□□□□□ -1.47
SNCA-212ENST00000611107 RAB4AP20338 218 aa5.84□□□□□ -1.47
SNCA-212ENST00000611107 MRPL51Q4U2R6 128 aaKnown RBP5.84□□□□□ -1.47
SNCA-212ENST00000611107 SLC7A5P1Q8MH63 180 aa5.84□□□□□ -1.47
SNCA-212ENST00000611107 DNAJC30Q96LL9 226 aa5.84□□□□□ -1.47
SNCA-212ENST00000611107 CTDSP1Q9GZU7 261 aa5.84□□□□□ -1.47
SNCA-212ENST00000611107 NIT2Q9NQR4 276 aa5.84□□□□□ -1.47
SNCA-212ENST00000611107 DNAH8Q96JB1 4490 aa5.84□□□□□ -1.48
SNCA-212ENST00000611107 SMKR1H3BMG3 65 aa5.83□□□□□ -1.48
SNCA-212ENST00000611107 LINC01556Q5JQF7 62 aa5.83□□□□□ -1.48
SNCA-212ENST00000611107 OR10J3Q5JRS4 329 aa5.83□□□□□ -1.48
SNCA-212ENST00000611107 FAM104BQ5XKR9 115 aa5.83□□□□□ -1.48
SNCA-212ENST00000611107 NTM-AS1Q6ZSK4 140 aa5.83□□□□□ -1.48
SNCA-212ENST00000611107 SPATA12Q7Z6I5 190 aa5.83□□□□□ -1.48
SNCA-212ENST00000611107 MRAP2Q96G30 205 aa5.83□□□□□ -1.48
SNCA-212ENST00000611107 IMMP2LQ96T52 175 aa5.83□□□□□ -1.48
SNCA-212ENST00000611107 TRBV6-8A0A0A6YYG3 113 aa5.82□□□□□ -1.48
SNCA-212ENST00000611107 TRAV8-6A0A0B4J262 113 aa5.82□□□□□ -1.48
SNCA-212ENST00000611107 TRBV6-5A0A0K0K1A5 114 aa5.82□□□□□ -1.48
SNCA-212ENST00000611107 S100A8P05109 93 aa5.82□□□□□ -1.48
SNCA-212ENST00000611107 NDUFA5Q16718 116 aa5.82□□□□□ -1.48
SNCA-212ENST00000611107 TTC32Q5I0X7 151 aa5.82□□□□□ -1.48
SNCA-212ENST00000611107 DAZ4Q86SG3 579 aaKnown RBP5.82□□□□□ -1.48
SNCA-212ENST00000611107 SVBPQ8N300 66 aa5.82□□□□□ -1.48
SNCA-212ENST00000611107 NRACQ8N912 160 aa5.82□□□□□ -1.48
SNCA-212ENST00000611107 FRZBQ92765 325 aa5.82□□□□□ -1.48
SNCA-212ENST00000611107 BTF3L4Q96K17 158 aa5.82□□□□□ -1.48
SNCA-212ENST00000611107 RPS10P5Q9NQ39 176 aa5.82□□□□□ -1.48
SNCA-212ENST00000611107 DAZ3Q9NR90 486 aaKnown RBP5.82□□□□□ -1.48
SNCA-212ENST00000611107 TMEM242Q9NWH2 141 aa5.82□□□□□ -1.48
SNCA-212ENST00000611107 URGCP-MRPS24S4R325 110 aa5.82□□□□□ -1.48
SNCA-212ENST00000611107 TRAV9-1A0A075B6T8 112 aa5.81□□□□□ -1.48
SNCA-212ENST00000611107 SDHAF1A6NFY7 115 aa5.81□□□□□ -1.48
SNCA-212ENST00000611107 C16orf90A8MZG2 172 aa5.81□□□□□ -1.48
SNCA-212ENST00000611107 SNAPINO95295 136 aa5.81□□□□□ -1.48
SNCA-212ENST00000611107 KCNIP4Q6PIL6 250 aa5.81□□□□□ -1.48
SNCA-212ENST00000611107 ATRAIDQ6UW56 229 aa5.81□□□□□ -1.48
SNCA-212ENST00000611107 NIT1Q86X76 327 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms