RNA–Protein interactions for RNA: ENST00000609445.5

SGMS1-209, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-209ENST00000609445 DERL1Q9BUN8 251 aa10.45□□□□□ -0.74
SGMS1-209ENST00000609445 RPL35P42766 123 aaKnown RBP10.44□□□□□ -0.74
SGMS1-209ENST00000609445 Q0VG73 95 aa10.44□□□□□ -0.74
SGMS1-209ENST00000609445 CHCHD5Q9BSY4 110 aa10.44□□□□□ -0.74
SGMS1-209ENST00000609445 C1orf43Q9BWL3 253 aa10.44□□□□□ -0.74
SGMS1-209ENST00000609445 KIF25-AS1Q9Y6Z4 181 aa10.44□□□□□ -0.74
SGMS1-209ENST00000609445 J3QL48 77 aa10.43□□□□□ -0.74
SGMS1-209ENST00000609445 CRPP02741 224 aa10.43□□□□□ -0.74
SGMS1-209ENST00000609445 ANGP03950 147 aaKnown RBP10.43□□□□□ -0.74
SGMS1-209ENST00000609445 GZMBP10144 247 aa10.43□□□□□ -0.74
SGMS1-209ENST00000609445 NTM-AS1Q6ZSK4 140 aa10.43□□□□□ -0.74
SGMS1-209ENST00000609445 GNG13Q9P2W3 67 aa10.43□□□□□ -0.74
SGMS1-209ENST00000609445 CHAC1Q9BUX1 264 aa10.42□□□□□ -0.74
SGMS1-209ENST00000609445 EIF5AP63241 154 aaKnown RBP10.41□□□□□ -0.74
SGMS1-209ENST00000609445 GAGE6Q13070 117 aa10.41□□□□□ -0.74
SGMS1-209ENST00000609445 CENPWQ5EE01 88 aa10.41□□□□□ -0.74
SGMS1-209ENST00000609445 CLPSL2Q6UWE3 100 aa10.41□□□□□ -0.74
SGMS1-209ENST00000609445 C11orf52Q96A22 123 aa10.41□□□□□ -0.74
SGMS1-209ENST00000609445 AP1S3Q96PC3 154 aa10.41□□□□□ -0.74
SGMS1-209ENST00000609445 TPPP3Q9BW30 176 aa10.41□□□□□ -0.74
SGMS1-209ENST00000609445 VAX2Q9UIW0 290 aa10.41□□□□□ -0.74
SGMS1-209ENST00000609445 IGLV2-8P01709 118 aa10.4□□□□□ -0.74
SGMS1-209ENST00000609445 HLA-DQA1P01909 254 aa10.4□□□□□ -0.74
SGMS1-209ENST00000609445 SMIM17P0DL12 118 aa10.4□□□□□ -0.74
SGMS1-209ENST00000609445 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.4□□□□□ -0.74
SGMS1-209ENST00000609445 CIRBP-AS1Q8TBR5 109 aa10.4□□□□□ -0.74
SGMS1-209ENST00000609445 MANBALQ9NQG1 85 aa10.4□□□□□ -0.74
SGMS1-209ENST00000609445 RAB19A4D1S5 217 aa10.39□□□□□ -0.75
SGMS1-209ENST00000609445 USP17L23D6RBM5 183 aa10.39□□□□□ -0.75
SGMS1-209ENST00000609445 MGPP08493 103 aa10.39□□□□□ -0.75
SGMS1-209ENST00000609445 KRTAP10-4P60372 401 aaPredicted RBP10.39□□□□□ -0.75
SGMS1-209ENST00000609445 RBX1P62877 108 aa10.39□□□□□ -0.75
SGMS1-209ENST00000609445 C14orf177Q52M58 125 aa10.39□□□□□ -0.75
SGMS1-209ENST00000609445 PKHD1L1Q86WI1 4243 aa10.38□□□□□ -0.75
SGMS1-209ENST00000609445 IGLC6P0CF74 106 aa10.38□□□□□ -0.75
SGMS1-209ENST00000609445 FER1L6-AS1Q8NA97 138 aa10.38□□□□□ -0.75
SGMS1-209ENST00000609445 OR2D3Q8NGH3 330 aa10.38□□□□□ -0.75
SGMS1-209ENST00000609445 DEFB104AQ8WTQ1 72 aa10.38□□□□□ -0.75
SGMS1-209ENST00000609445 LRP1Q07954 4544 aaKnown RBP10.38□□□□□ -0.75
SGMS1-209ENST00000609445 TRAV1-1A0A0B4J248 108 aa10.37□□□□□ -0.75
SGMS1-209ENST00000609445 C19orf71A6NCJ1 209 aa10.37□□□□□ -0.75
SGMS1-209ENST00000609445 KRTAP29-1A8MX34 341 aaPredicted RBP10.37□□□□□ -0.75
SGMS1-209ENST00000609445 M0QY20 66 aa10.37□□□□□ -0.75
SGMS1-209ENST00000609445 PRSS1P07477 247 aa10.37□□□□□ -0.75
SGMS1-209ENST00000609445 PKIAP61925 76 aa10.37□□□□□ -0.75
SGMS1-209ENST00000609445 MIAQ16674 131 aa10.37□□□□□ -0.75
SGMS1-209ENST00000609445 TMEM97Q5BJF2 176 aa10.37□□□□□ -0.75
SGMS1-209ENST00000609445 SUMO4Q6EEV6 95 aa10.37□□□□□ -0.75
SGMS1-209ENST00000609445 KRTAP26-1Q6PEX3 210 aa10.37□□□□□ -0.75
SGMS1-209ENST00000609445 LINC00269Q8N2A0 174 aa10.37□□□□□ -0.75
SGMS1-209ENST00000609445 DAZAP1Q96EP5 407 aaKnown RBP10.37□□□□□ -0.75
SGMS1-209ENST00000609445 PRR34Q9NV39 138 aa10.37□□□□□ -0.75
SGMS1-209ENST00000609445 TRBV25-1A0A075B6N4 114 aa10.36□□□□□ -0.75
SGMS1-209ENST00000609445 RPS20P60866 119 aaKnown RBP10.36□□□□□ -0.75
SGMS1-209ENST00000609445 IGHV1-24A0A0C4DH33 117 aa10.35□□□□□ -0.75
SGMS1-209ENST00000609445 IQCJQ1A5X6 159 aa10.35□□□□□ -0.75
SGMS1-209ENST00000609445 FAT3Q8TDW7 4589 aa10.34□□□□□ -0.75
SGMS1-209ENST00000609445 TRBV20OR9-2A0A075B6H5 130 aa10.34□□□□□ -0.75
SGMS1-209ENST00000609445 GNG4P50150 75 aa10.34□□□□□ -0.75
SGMS1-209ENST00000609445 SULT1A2P50226 295 aa10.34□□□□□ -0.75
SGMS1-209ENST00000609445 RAB5CP51148 216 aa10.34□□□□□ -0.75
SGMS1-209ENST00000609445 NKX2-5P52952 324 aaPredicted RBP10.34□□□□□ -0.75
SGMS1-209ENST00000609445 IGLV10-54A0A075B6I4 117 aa10.33□□□□□ -0.76
SGMS1-209ENST00000609445 P01737 135 aa10.33□□□□□ -0.76
SGMS1-209ENST00000609445 CACNG7P62955 275 aa10.33□□□□□ -0.76
SGMS1-209ENST00000609445 MEF2BQ02080 365 aaPredicted RBP10.33□□□□□ -0.76
SGMS1-209ENST00000609445 LYZL1Q6UWQ5 148 aa10.33□□□□□ -0.76
SGMS1-209ENST00000609445 MED9Q9NWA0 146 aa10.33□□□□□ -0.76
SGMS1-209ENST00000609445 TEX46H3BTG2 121 aa10.32□□□□□ -0.76
SGMS1-209ENST00000609445 H7C1H1 209 aa10.32□□□□□ -0.76
SGMS1-209ENST00000609445 RASL11AQ6T310 242 aa10.32□□□□□ -0.76
SGMS1-209ENST00000609445 C20orf203Q8NBC4 194 aa10.32□□□□□ -0.76
SGMS1-209ENST00000609445 GFRA4Q9GZZ7 299 aa10.32□□□□□ -0.76
SGMS1-209ENST00000609445 IGLV4-60A0A075B6I1 120 aa10.31□□□□□ -0.76
SGMS1-209ENST00000609445 PDE6DO43924 150 aa10.31□□□□□ -0.76
SGMS1-209ENST00000609445 IFNA1P01562 189 aa10.31□□□□□ -0.76
SGMS1-209ENST00000609445 REG3AQ06141 175 aa10.31□□□□□ -0.76
SGMS1-209ENST00000609445 EIF5AL1Q6IS14 154 aaKnown RBP10.31□□□□□ -0.76
SGMS1-209ENST00000609445 SMIM12Q96EX1 92 aa10.31□□□□□ -0.76
SGMS1-209ENST00000609445 XKRY2A2RUG3 117 aa10.3□□□□□ -0.76
SGMS1-209ENST00000609445 F2Z2F3 143 aa10.3□□□□□ -0.76
SGMS1-209ENST00000609445 PANO1I0J062 215 aa10.3□□□□□ -0.76
SGMS1-209ENST00000609445 TRGC1P0CF51 173 aa10.3□□□□□ -0.76
SGMS1-209ENST00000609445 BCL2P10415 239 aa10.3□□□□□ -0.76
SGMS1-209ENST00000609445 NTF3P20783 257 aa10.3□□□□□ -0.76
SGMS1-209ENST00000609445 DGAT2L7PQ6IED9 249 aa10.3□□□□□ -0.76
SGMS1-209ENST00000609445 C9orf163Q8N9P6 203 aa10.3□□□□□ -0.76
SGMS1-209ENST00000609445 TMEM243Q9BU79 118 aa10.3□□□□□ -0.76
SGMS1-209ENST00000609445 DPH3P1Q9H4G8 78 aa10.3□□□□□ -0.76
SGMS1-209ENST00000609445 NUDT10Q8NFP7 164 aa10.29□□□□□ -0.76
SGMS1-209ENST00000609445 NUDT11Q96G61 164 aa10.29□□□□□ -0.76
SGMS1-209ENST00000609445 NIT2Q9NQR4 276 aa10.29□□□□□ -0.76
SGMS1-209ENST00000609445 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.29□□□□□ -0.76
SGMS1-209ENST00000609445 RPL37AP61513 92 aaKnown RBP10.28□□□□□ -0.76
SGMS1-209ENST00000609445 A0A1B0GUV1 79 aa10.27□□□□□ -0.77
SGMS1-209ENST00000609445 CTRLP40313 264 aa10.27□□□□□ -0.77
SGMS1-209ENST00000609445 HNRNPA3P51991 378 aaKnown RBP10.27□□□□□ -0.77
SGMS1-209ENST00000609445 SDIM1Q6ZPB5 146 aa10.27□□□□□ -0.77
SGMS1-209ENST00000609445 TCTE3Q8IZS6 198 aa10.27□□□□□ -0.77
SGMS1-209ENST00000609445 C9orf62Q8N4C0 152 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms