RNA–Protein interactions for RNA: ENST00000607805.5

NECAB3-222, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 969 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-222	ENST00000607805	SNAI2	O43623	268 aa		13.45	□□□□□ -0.26
NECAB3-222	ENST00000607805	RPL19	P84098	196 aa	Known RBP	13.45	□□□□□ -0.26
NECAB3-222	ENST00000607805	CIRBP	Q14011	172 aa	Known RBP	13.45	□□□□□ -0.26
NECAB3-222	ENST00000607805	ZNF56	Q15929	161 aa		13.45	□□□□□ -0.26
NECAB3-222	ENST00000607805	CHCHD5	Q9BSY4	110 aa		13.45	□□□□□ -0.26
NECAB3-222	ENST00000607805	RBX1	P62877	108 aa		13.44	□□□□□ -0.26
NECAB3-222	ENST00000607805	AKR1C8P	Q5T2L2	129 aa		13.44	□□□□□ -0.26
NECAB3-222	ENST00000607805	MLST8	Q9BVC4	326 aa		13.44	□□□□□ -0.26
NECAB3-222	ENST00000607805	KIF25-AS1	Q9Y6Z4	181 aa		13.44	□□□□□ -0.26
NECAB3-222	ENST00000607805	ZNF471	Q9BX82	626 aa	Predicted RBP	13.43	□□□□□ -0.26
NECAB3-222	ENST00000607805		G3V3Q6	166 aa		13.42	□□□□□ -0.26
NECAB3-222	ENST00000607805	OR5AL1	P0C617	328 aa		13.42	□□□□□ -0.26
NECAB3-222	ENST00000607805	AKR1C3	P42330	323 aa		13.42	□□□□□ -0.26
NECAB3-222	ENST00000607805	TMEM97	Q5BJF2	176 aa		13.42	□□□□□ -0.26
NECAB3-222	ENST00000607805	LINC00269	Q8N2A0	174 aa		13.42	□□□□□ -0.26
NECAB3-222	ENST00000607805	CYTL1	Q9NRR1	136 aa		13.42	□□□□□ -0.26
NECAB3-222	ENST00000607805	FXYD6-FXYD2	A0A087WZ82	144 aa		13.41	□□□□□ -0.26
NECAB3-222	ENST00000607805	CNBP	P62633	177 aa	Known RBP	13.41	□□□□□ -0.26
NECAB3-222	ENST00000607805	CST9LP1	Q5W188	147 aa		13.41	□□□□□ -0.26
NECAB3-222	ENST00000607805		Q6ZRU5	148 aa		13.41	□□□□□ -0.26
NECAB3-222	ENST00000607805	RNF213	Q63HN8	5207 aa		13.41	□□□□□ -0.26
NECAB3-222	ENST00000607805	RGS21	Q2M5E4	152 aa		13.4	□□□□□ -0.26
NECAB3-222	ENST00000607805	CLPSL2	Q6UWE3	100 aa		13.4	□□□□□ -0.26
NECAB3-222	ENST00000607805	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	13.4	□□□□□ -0.26
NECAB3-222	ENST00000607805	CLRN3	Q8NCR9	226 aa		13.4	□□□□□ -0.26
NECAB3-222	ENST00000607805	MUC21	A0A0G2JKD1	596 aa		13.39	□□□□□ -0.27
NECAB3-222	ENST00000607805	MUC21	A0A140T8X8	626 aa		13.39	□□□□□ -0.27
NECAB3-222	ENST00000607805	GAGE6	Q13070	117 aa		13.39	□□□□□ -0.27
NECAB3-222	ENST00000607805	IQCJ	Q1A5X6	159 aa		13.39	□□□□□ -0.27
NECAB3-222	ENST00000607805	PAGE4	O60829	102 aa		13.38	□□□□□ -0.27
NECAB3-222	ENST00000607805	S100A9	P06702	114 aa	Known RBP	13.38	□□□□□ -0.27
NECAB3-222	ENST00000607805	DERL1	Q9BUN8	251 aa		13.38	□□□□□ -0.27
NECAB3-222	ENST00000607805	TRBV25-1	A0A075B6N4	114 aa		13.37	□□□□□ -0.27
NECAB3-222	ENST00000607805	SLPI	P03973	132 aa		13.37	□□□□□ -0.27
NECAB3-222	ENST00000607805	SPANXN1	Q5VSR9	72 aa		13.37	□□□□□ -0.27
NECAB3-222	ENST00000607805	STOML3	Q8TAV4	291 aa		13.37	□□□□□ -0.27
NECAB3-222	ENST00000607805		A0A0D9SG52	128 aa		13.36	□□□□□ -0.27
NECAB3-222	ENST00000607805		F5H697	171 aa		13.36	□□□□□ -0.27
NECAB3-222	ENST00000607805	SCO2	A0A1W2PP80	73 aa		13.35	□□□□□ -0.27
NECAB3-222	ENST00000607805	REG3A	Q06141	175 aa		13.35	□□□□□ -0.27
NECAB3-222	ENST00000607805	C20orf203	Q8NBC4	194 aa		13.35	□□□□□ -0.27
NECAB3-222	ENST00000607805		M0QY20	66 aa		13.34	□□□□□ -0.27
NECAB3-222	ENST00000607805	BAGE2	Q86Y30	109 aa		13.34	□□□□□ -0.27
NECAB3-222	ENST00000607805	MBD3L1	Q8WWY6	194 aa		13.34	□□□□□ -0.27
NECAB3-222	ENST00000607805	IGLV10-54	A0A075B6I4	117 aa		13.33	□□□□□ -0.28
NECAB3-222	ENST00000607805	IGHV1-24	A0A0C4DH33	117 aa		13.33	□□□□□ -0.28
NECAB3-222	ENST00000607805		A0A1B0GUV1	79 aa		13.33	□□□□□ -0.28
NECAB3-222	ENST00000607805	RNF185	Q96GF1	192 aa		13.33	□□□□□ -0.28
NECAB3-222	ENST00000607805	AP1S3	Q96PC3	154 aa		13.33	□□□□□ -0.28
NECAB3-222	ENST00000607805	GFRA4	Q9GZZ7	299 aa		13.33	□□□□□ -0.28
NECAB3-222	ENST00000607805		A0A087WYN8	130 aa		13.32	□□□□□ -0.28
NECAB3-222	ENST00000607805	TRAV8-4	A0A0B4J246	113 aa		13.32	□□□□□ -0.28
NECAB3-222	ENST00000607805		P01737	135 aa		13.32	□□□□□ -0.28
NECAB3-222	ENST00000607805	SPACA4	Q8TDM5	124 aa		13.32	□□□□□ -0.28
NECAB3-222	ENST00000607805	IGLV4-60	A0A075B6I1	120 aa		13.31	□□□□□ -0.28
NECAB3-222	ENST00000607805	IGHV3-64	A0A075B6Q5	118 aa		13.31	□□□□□ -0.28
NECAB3-222	ENST00000607805	hDV102S1	A0JD36	115 aa		13.31	□□□□□ -0.28
NECAB3-222	ENST00000607805	SST	P61278	116 aa		13.31	□□□□□ -0.28
NECAB3-222	ENST00000607805	ARPC5	O15511	151 aa		13.3	□□□□□ -0.28
NECAB3-222	ENST00000607805	IGLC6	P0CF74	106 aa		13.3	□□□□□ -0.28
NECAB3-222	ENST00000607805	CHTF8	P0CG12	524 aa		13.3	□□□□□ -0.28
NECAB3-222	ENST00000607805	SMIM17	P0DL12	118 aa		13.3	□□□□□ -0.28
NECAB3-222	ENST00000607805	SFT2D1	Q8WV19	159 aa		13.3	□□□□□ -0.28
NECAB3-222	ENST00000607805	SUMO4	Q6EEV6	95 aa		13.29	□□□□□ -0.28
NECAB3-222	ENST00000607805	TMUB2	Q71RG4	321 aa		13.29	□□□□□ -0.28
NECAB3-222	ENST00000607805	PLAC8	Q9NZF1	115 aa		13.29	□□□□□ -0.28
NECAB3-222	ENST00000607805	GZMB	P10144	247 aa		13.27	□□□□□ -0.29
NECAB3-222	ENST00000607805	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	13.26	□□□□□ -0.29
NECAB3-222	ENST00000607805		H7C1H1	209 aa		13.26	□□□□□ -0.29
NECAB3-222	ENST00000607805	PFDN1	O60925	122 aa		13.26	□□□□□ -0.29
NECAB3-222	ENST00000607805	RPL35	P42766	123 aa	Known RBP	13.26	□□□□□ -0.29
NECAB3-222	ENST00000607805	FAM213B	Q8TBF2	198 aa		13.26	□□□□□ -0.29
NECAB3-222	ENST00000607805	PGLYRP4	Q96LB8	373 aa		13.26	□□□□□ -0.29
NECAB3-222	ENST00000607805	TMEM243	Q9BU79	118 aa		13.26	□□□□□ -0.29
NECAB3-222	ENST00000607805	AP5S1	Q9NUS5	200 aa		13.26	□□□□□ -0.29
NECAB3-222	ENST00000607805		A0A1B0GV50	99 aa		13.25	□□□□□ -0.29
NECAB3-222	ENST00000607805	UMAD1	C9J7I0	102 aa		13.25	□□□□□ -0.29
NECAB3-222	ENST00000607805	NKX2-5	P52952	324 aa	Predicted RBP	13.25	□□□□□ -0.29
NECAB3-222	ENST00000607805	C15orf56	Q8N910	161 aa		13.25	□□□□□ -0.29
NECAB3-222	ENST00000607805	PHOX2A	O14813	284 aa		13.24	□□□□□ -0.29
NECAB3-222	ENST00000607805	MGP	P08493	103 aa		13.24	□□□□□ -0.29
NECAB3-222	ENST00000607805	KCNRG	Q8N5I3	272 aa		13.24	□□□□□ -0.29
NECAB3-222	ENST00000607805	C11orf52	Q96A22	123 aa		13.24	□□□□□ -0.29
NECAB3-222	ENST00000607805	C19orf71	A6NCJ1	209 aa		13.23	□□□□□ -0.29
NECAB3-222	ENST00000607805	SMLR1	H3BR10	107 aa		13.23	□□□□□ -0.29
NECAB3-222	ENST00000607805	RAB5C	P51148	216 aa		13.23	□□□□□ -0.29
NECAB3-222	ENST00000607805	ZNF345	Q14585	488 aa		13.23	□□□□□ -0.29
NECAB3-222	ENST00000607805	RASL11A	Q6T310	242 aa		13.23	□□□□□ -0.29
NECAB3-222	ENST00000607805	FER1L6-AS1	Q8NA97	138 aa		13.23	□□□□□ -0.29
NECAB3-222	ENST00000607805	DPH3	Q96FX2	82 aa		13.23	□□□□□ -0.29
NECAB3-222	ENST00000607805	LINC01600	Q96MT4	127 aa		13.22	□□□□□ -0.29
NECAB3-222	ENST00000607805	CACNG7	P62955	275 aa		13.21	□□□□□ -0.29
NECAB3-222	ENST00000607805	NIT2	Q9NQR4	276 aa		13.21	□□□□□ -0.29
NECAB3-222	ENST00000607805	H2AFB1	P0C5Y9	115 aa		13.2	□□□□□ -0.3
NECAB3-222	ENST00000607805	RPS20	P60866	119 aa	Known RBP	13.2	□□□□□ -0.3
NECAB3-222	ENST00000607805	COX6A2	Q02221	97 aa		13.2	□□□□□ -0.3
NECAB3-222	ENST00000607805	OR2D3	Q8NGH3	330 aa		13.2	□□□□□ -0.3
NECAB3-222	ENST00000607805	TPPP3	Q9BW30	176 aa		13.2	□□□□□ -0.3
NECAB3-222	ENST00000607805	CENPW	Q5EE01	88 aa		13.19	□□□□□ -0.3
NECAB3-222	ENST00000607805	RPS10	P46783	165 aa	Known RBP	13.18	□□□□□ -0.3

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