RNA–Protein interactions for RNA: ENST00000607427.1

CTSS-206, Transcript of cathepsin S, humanhuman

TSL 2

Gene CTSS, Length 390 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-206ENST00000607427 HERC1Q15751 4861 aa-1.24□□□□□ -2.61
CTSS-206ENST00000607427 E5RI56 91 aa-1.24□□□□□ -2.61
CTSS-206ENST00000607427 J3QLW9 94 aa-1.24□□□□□ -2.61
CTSS-206ENST00000607427 K7EQZ3 153 aa-1.24□□□□□ -2.61
CTSS-206ENST00000607427 PIN1P1O15428 100 aa-1.24□□□□□ -2.61
CTSS-206ENST00000607427 SMIM24O75264 130 aa-1.24□□□□□ -2.61
CTSS-206ENST00000607427 HAMPP81172 84 aa-1.24□□□□□ -2.61
CTSS-206ENST00000607427 KRTAP19-8Q3LI54 63 aa-1.24□□□□□ -2.61
CTSS-206ENST00000607427 TMEM128Q5BJH2 165 aa-1.24□□□□□ -2.61
CTSS-206ENST00000607427 TMEM244Q5VVB8 128 aa-1.24□□□□□ -2.61
CTSS-206ENST00000607427 ATP11AUNQ6ZP68 121 aa-1.24□□□□□ -2.61
CTSS-206ENST00000607427 IBTKQ9P2D0 1353 aaPredicted RBP-1.24□□□□□ -2.61
CTSS-206ENST00000607427 MUC22E2RYF6 1773 aaPredicted RBP-1.24□□□□□ -2.61
CTSS-206ENST00000607427 CREBBPQ92793 2442 aa-1.25□□□□□ -2.61
CTSS-206ENST00000607427 SIPA1L3O60292 1781 aaPredicted RBP-1.25□□□□□ -2.61
CTSS-206ENST00000607427 TOMM20LQ6UXN7 152 aa-1.25□□□□□ -2.61
CTSS-206ENST00000607427 OR8I2Q8N0Y5 310 aa-1.25□□□□□ -2.61
CTSS-206ENST00000607427 NDUFA12Q9UI09 145 aa-1.25□□□□□ -2.61
CTSS-206ENST00000607427 LSM2Q9Y333 95 aaKnown RBP-1.25□□□□□ -2.61
CTSS-206ENST00000607427 SPCS1Q9Y6A9 102 aa-1.25□□□□□ -2.61
CTSS-206ENST00000607427 BCL9LQ86UU0 1499 aa-1.25□□□□□ -2.61
CTSS-206ENST00000607427 IFT172Q9UG01 1749 aa-1.26□□□□□ -2.61
CTSS-206ENST00000607427 M0R2P5 195 aa-1.26□□□□□ -2.61
CTSS-206ENST00000607427 C10orf71Q711Q0 1435 aa-1.26□□□□□ -2.61
CTSS-206ENST00000607427 CLPSL1A2RUU4 121 aa-1.27□□□□□ -2.61
CTSS-206ENST00000607427 BCE1O60756 84 aa-1.27□□□□□ -2.61
CTSS-206ENST00000607427 LINC01545Q5VT33 79 aa-1.27□□□□□ -2.61
CTSS-206ENST00000607427 SCN3BQ9NY72 215 aa-1.27□□□□□ -2.61
CTSS-206ENST00000607427 PLXNB2O15031 1838 aa-1.27□□□□□ -2.61
CTSS-206ENST00000607427 TGP01266 2768 aa-1.28□□□□□ -2.61
CTSS-206ENST00000607427 ERCC6Q03468 1493 aa-1.28□□□□□ -2.61
CTSS-206ENST00000607427 J3KT08 172 aa-1.28□□□□□ -2.61
CTSS-206ENST00000607427 CFAP126Q5VTH2 177 aa-1.28□□□□□ -2.61
CTSS-206ENST00000607427 Q5VV11 94 aa-1.28□□□□□ -2.61
CTSS-206ENST00000607427 PPP1R2P3Q6NXS1 205 aa-1.28□□□□□ -2.61
CTSS-206ENST00000607427 C10orf82Q8WW14 230 aa-1.28□□□□□ -2.61
CTSS-206ENST00000607427 NPVFQ9HCQ7 196 aa-1.28□□□□□ -2.61
CTSS-206ENST00000607427 WNK3Q9BYP7 1800 aa-1.29□□□□□ -2.62
CTSS-206ENST00000607427 KMT2CQ8NEZ4 4911 aaKnown RBP-1.29□□□□□ -2.62
CTSS-206ENST00000607427 FXYD6-FXYD2A0A087WZ82 144 aa-1.29□□□□□ -2.62
CTSS-206ENST00000607427 A0A1B0GV72 72 aa-1.29□□□□□ -2.62
CTSS-206ENST00000607427 NPFFO15130 113 aa-1.29□□□□□ -2.62
CTSS-206ENST00000607427 YPEL1O60688 119 aa-1.29□□□□□ -2.62
CTSS-206ENST00000607427 SMPXQ9UHP9 88 aa-1.29□□□□□ -2.62
CTSS-206ENST00000607427 LAMC1P11047 1609 aa-1.29□□□□□ -2.62
CTSS-206ENST00000607427 ZNF609O15014 1411 aa-1.3□□□□□ -2.62
CTSS-206ENST00000607427 PRKDCP78527 4128 aaKnown RBP-1.3□□□□□ -2.62
CTSS-206ENST00000607427 FLGP20930 4061 aaPredicted RBP-1.3□□□□□ -2.62
CTSS-206ENST00000607427 FAM92AA1XBS5 289 aa-1.3□□□□□ -2.62
CTSS-206ENST00000607427 LOC730098B7Z3J9 87 aa-1.3□□□□□ -2.62
CTSS-206ENST00000607427 S100GP29377 79 aa-1.3□□□□□ -2.62
CTSS-206ENST00000607427 UBE2D1P51668 147 aa-1.3□□□□□ -2.62
CTSS-206ENST00000607427 URB1O60287 2271 aaKnown RBP-1.3□□□□□ -2.62
CTSS-206ENST00000607427 SVEP1Q4LDE5 3571 aa-1.3□□□□□ -2.62
CTSS-206ENST00000607427 TNFSF15O95150 251 aa-1.31□□□□□ -2.62
CTSS-206ENST00000607427 RPS28P62857 69 aaKnown RBP-1.31□□□□□ -2.62
CTSS-206ENST00000607427 MYH13Q9UKX3 1938 aa-1.31□□□□□ -2.62
CTSS-206ENST00000607427 KDM3BQ7LBC6 1761 aa-1.31□□□□□ -2.62
CTSS-206ENST00000607427 TRAV36DV7A0A075B6V5 113 aa-1.32□□□□□ -2.62
CTSS-206ENST00000607427 APOC4-APOC2K7ER74 178 aa-1.32□□□□□ -2.62
CTSS-206ENST00000607427 CMPK1P30085 196 aa-1.32□□□□□ -2.62
CTSS-206ENST00000607427 TFAMQ00059 246 aaKnown RBP-1.32□□□□□ -2.62
CTSS-206ENST00000607427 C9orf116Q5BN46 136 aaPredicted RBP-1.32□□□□□ -2.62
CTSS-206ENST00000607427 BAGE3Q86Y29 109 aa-1.32□□□□□ -2.62
CTSS-206ENST00000607427 TP53AIP1Q9HCN2 124 aa-1.32□□□□□ -2.62
CTSS-206ENST00000607427 RPRMQ9NS64 109 aa-1.32□□□□□ -2.62
CTSS-206ENST00000607427 PKHD1P08F94 4074 aa-1.33□□□□□ -2.62
CTSS-206ENST00000607427 SYNJ1O43426 1573 aa-1.33□□□□□ -2.62
CTSS-206ENST00000607427 LAMA5O15230 3695 aa-1.33□□□□□ -2.62
CTSS-206ENST00000607427 PIRTP0C851 137 aa-1.33□□□□□ -2.62
CTSS-206ENST00000607427 TCTE3Q8IZS6 198 aa-1.33□□□□□ -2.62
CTSS-206ENST00000607427 HIGD1AQ9Y241 93 aa-1.33□□□□□ -2.62
CTSS-206ENST00000607427 PBRM1Q86U86 1689 aa-1.33□□□□□ -2.62
CTSS-206ENST00000607427 FAT1Q14517 4588 aa-1.33□□□□□ -2.62
CTSS-206ENST00000607427 LRP6O75581 1613 aa-1.33□□□□□ -2.62
CTSS-206ENST00000607427 I3L2K1 104 aa-1.34□□□□□ -2.62
CTSS-206ENST00000607427 SCTP09683 121 aa-1.34□□□□□ -2.62
CTSS-206ENST00000607427 SMIM6P0DI80 62 aa-1.34□□□□□ -2.62
CTSS-206ENST00000607427 UBE2G1P62253 170 aa-1.34□□□□□ -2.62
CTSS-206ENST00000607427 DCDP81605 110 aaKnown RBP-1.34□□□□□ -2.62
CTSS-206ENST00000607427 SPANXN1Q5VSR9 72 aa-1.34□□□□□ -2.62
CTSS-206ENST00000607427 MIC13Q5XKP0 118 aa-1.34□□□□□ -2.62
CTSS-206ENST00000607427 SPAG11AQ6PDA7 123 aa-1.34□□□□□ -2.62
CTSS-206ENST00000607427 MAGOHBQ96A72 148 aaKnown RBP-1.34□□□□□ -2.62
CTSS-206ENST00000607427 TRBV20-1A0A075B6N2 111 aa-1.35□□□□□ -2.63
CTSS-206ENST00000607427 A0A1B0GX51 115 aa-1.35□□□□□ -2.63
CTSS-206ENST00000607427 M0R129 80 aa-1.35□□□□□ -2.63
CTSS-206ENST00000607427 KRTAP20-2Q3LI61 65 aa-1.35□□□□□ -2.63
CTSS-206ENST00000607427 RPL7L1Q6DKI1 246 aaKnown RBP-1.35□□□□□ -2.63
CTSS-206ENST00000607427 VSTM2AQ8TAG5 236 aa-1.35□□□□□ -2.63
CTSS-206ENST00000607427 ERCC6L2Q5T890 1561 aa-1.35□□□□□ -2.63
CTSS-206ENST00000607427 TSC2P49815 1807 aa-1.36□□□□□ -2.63
CTSS-206ENST00000607427 FABP1P07148 127 aa-1.36□□□□□ -2.63
CTSS-206ENST00000607427 SKA2Q8WVK7 121 aaPredicted RBP-1.36□□□□□ -2.63
CTSS-206ENST00000607427 CENPHQ9H3R5 247 aa-1.36□□□□□ -2.63
CTSS-206ENST00000607427 A6NIN4 97 aa-1.37□□□□□ -2.63
CTSS-206ENST00000607427 TRBV6-1A0A0K0K1D8 114 aa-1.38□□□□□ -2.63
CTSS-206ENST00000607427 SPRR1BP22528 89 aa-1.38□□□□□ -2.63
CTSS-206ENST00000607427 SPTSSBQ8NFR3 76 aa-1.38□□□□□ -2.63
CTSS-206ENST00000607427 AGPAT4-IT1Q9H0P7 198 aa-1.38□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms