RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 MAP1LC3BQ9GZQ8 125 aa9.7□□□□□ -0.86
CTSA-216ENST00000607212 F5H697 171 aa9.69□□□□□ -0.86
CTSA-216ENST00000607212 OXTP01178 125 aa9.69□□□□□ -0.86
CTSA-216ENST00000607212 RPL37AP61513 92 aaKnown RBP9.69□□□□□ -0.86
CTSA-216ENST00000607212 LINC01559Q495D7 138 aa9.69□□□□□ -0.86
CTSA-216ENST00000607212 RAB19A4D1S5 217 aa9.68□□□□□ -0.86
CTSA-216ENST00000607212 SSTP61278 116 aa9.68□□□□□ -0.86
CTSA-216ENST00000607212 EIF5AP63241 154 aaKnown RBP9.68□□□□□ -0.86
CTSA-216ENST00000607212 PLA2G2DQ9UNK4 145 aa9.68□□□□□ -0.86
CTSA-216ENST00000607212 TRBV6-8A0A0A6YYG3 113 aa9.67□□□□□ -0.86
CTSA-216ENST00000607212 USP17L23D6RBM5 183 aa9.67□□□□□ -0.86
CTSA-216ENST00000607212 RAB4BP61018 213 aa9.67□□□□□ -0.86
CTSA-216ENST00000607212 PKIAP61925 76 aa9.67□□□□□ -0.86
CTSA-216ENST00000607212 ZNF674Q2M3X9 581 aa9.67□□□□□ -0.86
CTSA-216ENST00000607212 MPV17L2Q567V2 206 aa9.67□□□□□ -0.86
CTSA-216ENST00000607212 ATRAIDQ6UW56 229 aa9.67□□□□□ -0.86
CTSA-216ENST00000607212 UQCC3Q6UW78 93 aa9.67□□□□□ -0.86
CTSA-216ENST00000607212 CLPSL2Q6UWE3 100 aa9.67□□□□□ -0.86
CTSA-216ENST00000607212 MUC21A0A0G2JKD1 596 aa9.66□□□□□ -0.86
CTSA-216ENST00000607212 MUC21A0A140T8X8 626 aa9.66□□□□□ -0.86
CTSA-216ENST00000607212 SPANXN1Q5VSR9 72 aa9.66□□□□□ -0.86
CTSA-216ENST00000607212 ENHOQ6UWT2 76 aa9.66□□□□□ -0.86
CTSA-216ENST00000607212 NEXN-AS1Q8NBZ9 246 aa9.66□□□□□ -0.86
CTSA-216ENST00000607212 A0A1B0GV50 99 aa9.65□□□□□ -0.86
CTSA-216ENST00000607212 LTAP01374 205 aa9.65□□□□□ -0.86
CTSA-216ENST00000607212 SMIM17P0DL12 118 aa9.65□□□□□ -0.86
CTSA-216ENST00000607212 SULT1A2P50226 295 aa9.65□□□□□ -0.86
CTSA-216ENST00000607212 RPL19P84098 196 aaKnown RBP9.65□□□□□ -0.86
CTSA-216ENST00000607212 OR10G8Q8NGN5 311 aa9.65□□□□□ -0.86
CTSA-216ENST00000607212 OR10AG1Q8NH19 301 aa9.65□□□□□ -0.86
CTSA-216ENST00000607212 LOC105371267A0A1B0GV96 52 aa9.64□□□□□ -0.87
CTSA-216ENST00000607212 GAGE6Q13070 117 aa9.64□□□□□ -0.87
CTSA-216ENST00000607212 MIAQ16674 131 aa9.64□□□□□ -0.87
CTSA-216ENST00000607212 EIF5AL1Q6IS14 154 aaKnown RBP9.64□□□□□ -0.87
CTSA-216ENST00000607212 PRR27Q6MZM9 219 aa9.64□□□□□ -0.87
CTSA-216ENST00000607212 COX8CQ7Z4L0 72 aa9.64□□□□□ -0.87
CTSA-216ENST00000607212 TCEAL7Q9BRU2 100 aa9.64□□□□□ -0.87
CTSA-216ENST00000607212 TRBV6-1A0A0K0K1D8 114 aa9.63□□□□□ -0.87
CTSA-216ENST00000607212 TMEM218A2RU14 115 aa9.63□□□□□ -0.87
CTSA-216ENST00000607212 PAGE4O60829 102 aa9.63□□□□□ -0.87
CTSA-216ENST00000607212 KRTAP10-4P60372 401 aaPredicted RBP9.63□□□□□ -0.87
CTSA-216ENST00000607212 TMEM97Q5BJF2 176 aa9.63□□□□□ -0.87
CTSA-216ENST00000607212 APOC3P02656 99 aa9.62□□□□□ -0.87
CTSA-216ENST00000607212 PRSS1P07477 247 aa9.62□□□□□ -0.87
CTSA-216ENST00000607212 FHITP49789 147 aa9.62□□□□□ -0.87
CTSA-216ENST00000607212 BLOC1S1P78537 153 aa9.62□□□□□ -0.87
CTSA-216ENST00000607212 SRSF3P84103 164 aaKnown RBP9.62□□□□□ -0.87
CTSA-216ENST00000607212 C10orf91Q5T1B1 145 aa9.62□□□□□ -0.87
CTSA-216ENST00000607212 DPH3Q96FX2 82 aa9.62□□□□□ -0.87
CTSA-216ENST00000607212 DERL1Q9BUN8 251 aa9.62□□□□□ -0.87
CTSA-216ENST00000607212 TRBV25-1A0A075B6N4 114 aa9.61□□□□□ -0.87
CTSA-216ENST00000607212 S100A9P06702 114 aaKnown RBP9.61□□□□□ -0.87
CTSA-216ENST00000607212 MGPP08493 103 aa9.61□□□□□ -0.87
CTSA-216ENST00000607212 DGAT2L7PQ6IED9 249 aa9.61□□□□□ -0.87
CTSA-216ENST00000607212 BAGE2Q86Y30 109 aa9.61□□□□□ -0.87
CTSA-216ENST00000607212 LINC00269Q8N2A0 174 aa9.61□□□□□ -0.87
CTSA-216ENST00000607212 SCO2A0A1W2PP80 73 aa9.6□□□□□ -0.87
CTSA-216ENST00000607212 ADCYAP1P18509 176 aa9.6□□□□□ -0.87
CTSA-216ENST00000607212 RBX1P62877 108 aa9.6□□□□□ -0.87
CTSA-216ENST00000607212 LYPD6BQ8NI32 183 aa9.6□□□□□ -0.87
CTSA-216ENST00000607212 FAM213BQ8TBF2 198 aa9.6□□□□□ -0.87
CTSA-216ENST00000607212 SFT2D1Q8WV19 159 aa9.6□□□□□ -0.87
CTSA-216ENST00000607212 TPPP3Q9BW30 176 aa9.6□□□□□ -0.87
CTSA-216ENST00000607212 CARHSP1Q9Y2V2 147 aaKnown RBP9.6□□□□□ -0.87
CTSA-216ENST00000607212 IGLV10-54A0A075B6I4 117 aa9.59□□□□□ -0.87
CTSA-216ENST00000607212 AP1S3Q96PC3 154 aa9.59□□□□□ -0.87
CTSA-216ENST00000607212 IGHV1-24A0A0C4DH33 117 aa9.58□□□□□ -0.88
CTSA-216ENST00000607212 hDV102S1A0JD36 115 aa9.58□□□□□ -0.88
CTSA-216ENST00000607212 CXCL1P09341 107 aa9.58□□□□□ -0.88
CTSA-216ENST00000607212 C9orf163Q8N9P6 203 aa9.58□□□□□ -0.88
CTSA-216ENST00000607212 AP5S1Q9NUS5 200 aa9.58□□□□□ -0.88
CTSA-216ENST00000607212 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.58□□□□□ -0.88
CTSA-216ENST00000607212 SNAI2O43623 268 aa9.57□□□□□ -0.88
CTSA-216ENST00000607212 HNRNPA3P51991 378 aaKnown RBP9.57□□□□□ -0.88
CTSA-216ENST00000607212 REG3AQ06141 175 aa9.57□□□□□ -0.88
CTSA-216ENST00000607212 FAM74A3Q4VXF1 159 aa9.57□□□□□ -0.88
CTSA-216ENST00000607212 NTM-AS1Q6ZSK4 140 aa9.57□□□□□ -0.88
CTSA-216ENST00000607212 DAZAP1Q96EP5 407 aaKnown RBP9.57□□□□□ -0.88
CTSA-216ENST00000607212 LRP1Q07954 4544 aaKnown RBP9.57□□□□□ -0.88
CTSA-216ENST00000607212 H7C1H1 209 aa9.56□□□□□ -0.88
CTSA-216ENST00000607212 OR5AL1P0C617 328 aa9.56□□□□□ -0.88
CTSA-216ENST00000607212 RAB5CP51148 216 aa9.56□□□□□ -0.88
CTSA-216ENST00000607212 CLRN3Q8NCR9 226 aa9.56□□□□□ -0.88
CTSA-216ENST00000607212 SEC11CQ9BY50 192 aa9.56□□□□□ -0.88
CTSA-216ENST00000607212 C9JQL5 133 aa9.55□□□□□ -0.88
CTSA-216ENST00000607212 F8W036 122 aa9.55□□□□□ -0.88
CTSA-216ENST00000607212 UBE2L6O14933 153 aa9.55□□□□□ -0.88
CTSA-216ENST00000607212 SVBPQ8N300 66 aa9.55□□□□□ -0.88
CTSA-216ENST00000607212 DPH3P1Q9H4G8 78 aa9.55□□□□□ -0.88
CTSA-216ENST00000607212 PRR34Q9NV39 138 aa9.55□□□□□ -0.88
CTSA-216ENST00000607212 VAX2Q9UIW0 290 aa9.55□□□□□ -0.88
CTSA-216ENST00000607212 FAT3Q8TDW7 4589 aa9.55□□□□□ -0.88
CTSA-216ENST00000607212 IGHV3-64A0A075B6Q5 118 aa9.54□□□□□ -0.88
CTSA-216ENST00000607212 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.54□□□□□ -0.88
CTSA-216ENST00000607212 SSBP4Q9BWG4 385 aaPredicted RBP9.54□□□□□ -0.88
CTSA-216ENST00000607212 PKHD1L1Q86WI1 4243 aa9.54□□□□□ -0.88
CTSA-216ENST00000607212 PANO1I0J062 215 aa9.53□□□□□ -0.88
CTSA-216ENST00000607212 GZMBP10144 247 aa9.53□□□□□ -0.88
CTSA-216ENST00000607212 IQCJQ1A5X6 159 aa9.53□□□□□ -0.88
CTSA-216ENST00000607212 WDR73Q6P4I2 378 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms