RNA–Protein interactions for RNA: ENST00000602619.1

SGMS1-207, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-207ENST00000602619 SLC48A1Q6P1K1 146 aa1.32□□□□□ -2.2
SGMS1-207ENST00000602619 DMAC1Q96GE9 116 aa1.32□□□□□ -2.2
SGMS1-207ENST00000602619 REG4Q9BYZ8 158 aa1.32□□□□□ -2.2
SGMS1-207ENST00000602619 CDC42SE1Q9NRR8 79 aa1.32□□□□□ -2.2
SGMS1-207ENST00000602619 TMEM14CQ9P0S9 112 aa1.32□□□□□ -2.2
SGMS1-207ENST00000602619 SNURFQ9Y675 71 aa1.32□□□□□ -2.2
SGMS1-207ENST00000602619 CDK5RAP2Q96SN8 1893 aa1.31□□□□□ -2.2
SGMS1-207ENST00000602619 MYO16Q9Y6X6 1858 aa1.31□□□□□ -2.2
SGMS1-207ENST00000602619 MYH7BA7E2Y1 1941 aa1.31□□□□□ -2.2
SGMS1-207ENST00000602619 TCHHQ07283 1943 aa1.31□□□□□ -2.2
SGMS1-207ENST00000602619 TRBV10-1A0A0K0K1A3 114 aa1.31□□□□□ -2.2
SGMS1-207ENST00000602619 OOSP1A8MZH6 123 aa1.31□□□□□ -2.2
SGMS1-207ENST00000602619 TMEM262E9PQX1 116 aa1.31□□□□□ -2.2
SGMS1-207ENST00000602619 J3QRE1 110 aa1.31□□□□□ -2.2
SGMS1-207ENST00000602619 SSSCA1O60232 199 aa1.31□□□□□ -2.2
SGMS1-207ENST00000602619 SLC25A6P12236 298 aa1.31□□□□□ -2.2
SGMS1-207ENST00000602619 DCDP81605 110 aaKnown RBP1.31□□□□□ -2.2
SGMS1-207ENST00000602619 IQCJQ1A5X6 159 aa1.31□□□□□ -2.2
SGMS1-207ENST00000602619 C9orf116Q5BN46 136 aaPredicted RBP1.31□□□□□ -2.2
SGMS1-207ENST00000602619 LYPD5Q6UWN5 251 aa1.31□□□□□ -2.2
SGMS1-207ENST00000602619 ZNF720Q7Z2F6 126 aa1.31□□□□□ -2.2
SGMS1-207ENST00000602619 C5orf38Q86SI9 138 aa1.31□□□□□ -2.2
SGMS1-207ENST00000602619 C10orf105Q8TEF2 133 aa1.31□□□□□ -2.2
SGMS1-207ENST00000602619 C10orf82Q8WW14 230 aa1.31□□□□□ -2.2
SGMS1-207ENST00000602619 TMEM106BQ9NUM4 274 aa1.31□□□□□ -2.2
SGMS1-207ENST00000602619 MED9Q9NWA0 146 aa1.31□□□□□ -2.2
SGMS1-207ENST00000602619 MRPL36Q9P0J6 103 aaKnown RBP1.31□□□□□ -2.2
SGMS1-207ENST00000602619 RREB1Q92766 1687 aa1.31□□□□□ -2.2
SGMS1-207ENST00000602619 PARP4Q9UKK3 1724 aaKnown RBP1.31□□□□□ -2.2
SGMS1-207ENST00000602619 SIPA1L3O60292 1781 aaPredicted RBP1.31□□□□□ -2.2
SGMS1-207ENST00000602619 DIDO1Q9BTC0 2240 aaKnown RBP1.31□□□□□ -2.2
SGMS1-207ENST00000602619 MYO5AQ9Y4I1 1855 aaKnown RBP1.31□□□□□ -2.2
SGMS1-207ENST00000602619 DUOX1Q9NRD9 1551 aa1.3□□□□□ -2.2
SGMS1-207ENST00000602619 KIF1AQ12756 1690 aa1.3□□□□□ -2.2
SGMS1-207ENST00000602619 C4AP0C0L4 1744 aa1.3□□□□□ -2.2
SGMS1-207ENST00000602619 C4BP0C0L5 1744 aa1.3□□□□□ -2.2
SGMS1-207ENST00000602619 DDX60Q8IY21 1712 aaKnown RBP1.3□□□□□ -2.2
SGMS1-207ENST00000602619 NWD2Q9ULI1 1742 aa1.3□□□□□ -2.2
SGMS1-207ENST00000602619 MARF1Q9Y4F3 1742 aaKnown RBP1.3□□□□□ -2.2
SGMS1-207ENST00000602619 TRGV2A0A075B6R0 118 aa1.3□□□□□ -2.2
SGMS1-207ENST00000602619 UBE2L5PA0A1B0GUS4 154 aa1.3□□□□□ -2.2
SGMS1-207ENST00000602619 JMJD7-PLA2G4BH0Y9G9 81 aa1.3□□□□□ -2.2
SGMS1-207ENST00000602619 H3BQ15 152 aa1.3□□□□□ -2.2
SGMS1-207ENST00000602619 PPYP01298 95 aa1.3□□□□□ -2.2
SGMS1-207ENST00000602619 IGKCP01834 107 aa1.3□□□□□ -2.2
SGMS1-207ENST00000602619 RNASE3P12724 160 aaKnown RBP1.3□□□□□ -2.2
SGMS1-207ENST00000602619 UBE2G1P62253 170 aa1.3□□□□□ -2.2
SGMS1-207ENST00000602619 UBE2L3P68036 154 aaKnown RBP1.3□□□□□ -2.2
SGMS1-207ENST00000602619 S100A7L2Q5SY68 101 aa1.3□□□□□ -2.2
SGMS1-207ENST00000602619 Q8N8P6 123 aa1.3□□□□□ -2.2
SGMS1-207ENST00000602619 DPY30Q9C005 99 aa1.3□□□□□ -2.2
SGMS1-207ENST00000602619 C22orf24Q9Y442 160 aa1.3□□□□□ -2.2
SGMS1-207ENST00000602619 V9GYS6 101 aa1.3□□□□□ -2.2
SGMS1-207ENST00000602619 FANCMQ8IYD8 2048 aa1.3□□□□□ -2.2
SGMS1-207ENST00000602619 PHLPP1O60346 1717 aa1.29□□□□□ -2.2
SGMS1-207ENST00000602619 PKD1L3Q7Z443 1732 aa1.29□□□□□ -2.2
SGMS1-207ENST00000602619 ZSWIM8A7E2V4 1837 aa1.29□□□□□ -2.2
SGMS1-207ENST00000602619 CCDC88AQ3V6T2 1871 aa1.29□□□□□ -2.2
SGMS1-207ENST00000602619 CPAMD8Q8IZJ3 1885 aa1.29□□□□□ -2.2
SGMS1-207ENST00000602619 HEATR5AQ86XA9 2040 aa1.29□□□□□ -2.2
SGMS1-207ENST00000602619 A0A0G2JND7 137 aa1.29□□□□□ -2.2
SGMS1-207ENST00000602619 TRBV10-3A0A0K0K1G6 114 aa1.29□□□□□ -2.2
SGMS1-207ENST00000602619 NUPR2A6NF83 97 aa1.29□□□□□ -2.2
SGMS1-207ENST00000602619 MRPS14O60783 128 aaKnown RBP1.29□□□□□ -2.2
SGMS1-207ENST00000602619 DNAL4O96015 105 aa1.29□□□□□ -2.2
SGMS1-207ENST00000602619 IGHV3-30P01768 117 aa1.29□□□□□ -2.2
SGMS1-207ENST00000602619 IGHV3-30-5P0DP03 117 aa1.29□□□□□ -2.2
SGMS1-207ENST00000602619 PRB4P10163 310 aaPredicted RBP1.29□□□□□ -2.2
SGMS1-207ENST00000602619 UBA52P62987 128 aaKnown RBP1.29□□□□□ -2.2
SGMS1-207ENST00000602619 RBM3P98179 157 aaKnown RBP1.29□□□□□ -2.2
SGMS1-207ENST00000602619 KRTAP6-3Q3LI67 103 aa1.29□□□□□ -2.2
SGMS1-207ENST00000602619 CSAG1Q6PB30 78 aa1.29□□□□□ -2.2
SGMS1-207ENST00000602619 BRD3OSQ6XYD6 125 aa1.29□□□□□ -2.2
SGMS1-207ENST00000602619 KRTAP13-1Q8IUC0 172 aa1.29□□□□□ -2.2
SGMS1-207ENST00000602619 SPTSSBQ8NFR3 76 aa1.29□□□□□ -2.2
SGMS1-207ENST00000602619 DSCR8Q96T75 97 aa1.29□□□□□ -2.2
SGMS1-207ENST00000602619 SNHG12Q9BXW3 62 aa1.29□□□□□ -2.2
SGMS1-207ENST00000602619 MRPL35Q9NZE8 188 aaKnown RBP1.29□□□□□ -2.2
SGMS1-207ENST00000602619 PAPPAQ13219 1627 aa1.29□□□□□ -2.2
SGMS1-207ENST00000602619 PLCH1Q4KWH8 1693 aa1.29□□□□□ -2.2
SGMS1-207ENST00000602619 ALS2Q96Q42 1657 aa1.29□□□□□ -2.2
SGMS1-207ENST00000602619 TJP1Q07157 1748 aa1.29□□□□□ -2.2
SGMS1-207ENST00000602619 NUP188Q5SRE5 1749 aa1.29□□□□□ -2.2
SGMS1-207ENST00000602619 LAMB4A4D0S4 1761 aa1.29□□□□□ -2.2
SGMS1-207ENST00000602619 SCN11AQ9UI33 1791 aa1.29□□□□□ -2.2
SGMS1-207ENST00000602619 ARFGEF2Q9Y6D5 1785 aa1.29□□□□□ -2.2
SGMS1-207ENST00000602619 LAMA4Q16363 1823 aa1.29□□□□□ -2.2
SGMS1-207ENST00000602619 MGAMO43451 1857 aa1.29□□□□□ -2.2
SGMS1-207ENST00000602619 FREM3P0C091 2139 aa1.28□□□□□ -2.2
SGMS1-207ENST00000602619 TRAV23DV6A0A075B6W5 121 aa1.28□□□□□ -2.2
SGMS1-207ENST00000602619 A0A087WXM4 84 aa1.28□□□□□ -2.2
SGMS1-207ENST00000602619 CXorf51AA0A1B0GTR3 108 aa1.28□□□□□ -2.2
SGMS1-207ENST00000602619 HIGD1CA8MV81 97 aa1.28□□□□□ -2.2
SGMS1-207ENST00000602619 M0R2N4 97 aa1.28□□□□□ -2.2
SGMS1-207ENST00000602619 INE1O15225 51 aa1.28□□□□□ -2.2
SGMS1-207ENST00000602619 MPC2O95563 127 aa1.28□□□□□ -2.2
SGMS1-207ENST00000602619 INSL4Q14641 139 aa1.28□□□□□ -2.2
SGMS1-207ENST00000602619 SPATA45Q537H7 98 aa1.28□□□□□ -2.2
SGMS1-207ENST00000602619 LINC00322Q6ZN03 302 aaPredicted RBP1.28□□□□□ -2.2
SGMS1-207ENST00000602619 COMMD6Q7Z4G1 85 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms