RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 HOXB4P17483 251 aaPredicted RBP6.79□□□□□ -1.32
CSMD1-216ENST00000602557 IGKV2D-26A0A0A0MRZ7 120 aa6.79□□□□□ -1.32
CSMD1-216ENST00000602557 Q6ZQT7 251 aa6.78□□□□□ -1.32
CSMD1-216ENST00000602557 H3BT86 120 aa6.78□□□□□ -1.32
CSMD1-216ENST00000602557 ZNF524Q96C55 264 aa6.78□□□□□ -1.32
CSMD1-216ENST00000602557 PROK2Q9HC23 129 aa6.78□□□□□ -1.32
CSMD1-216ENST00000602557 A0A0J9YXV3 536 aa6.78□□□□□ -1.32
CSMD1-216ENST00000602557 XGP55808 180 aa6.78□□□□□ -1.32
CSMD1-216ENST00000602557 MRPL53Q96EL3 112 aaKnown RBP6.78□□□□□ -1.32
CSMD1-216ENST00000602557 FANCD2OSQ96PS1 177 aa6.78□□□□□ -1.32
CSMD1-216ENST00000602557 A0A0J9YY99 117 aa6.78□□□□□ -1.32
CSMD1-216ENST00000602557 C2orf70A6NJV1 201 aa6.78□□□□□ -1.32
CSMD1-216ENST00000602557 LRP4O75096 1905 aa6.78□□□□□ -1.32
CSMD1-216ENST00000602557 NREPQ16612 68 aa6.78□□□□□ -1.32
CSMD1-216ENST00000602557 PTPRSQ13332 1948 aa6.78□□□□□ -1.32
CSMD1-216ENST00000602557 FAM110AQ9BQ89 295 aa6.77□□□□□ -1.32
CSMD1-216ENST00000602557 LY6G6EA0A0G2JKS1 128 aa6.77□□□□□ -1.33
CSMD1-216ENST00000602557 U3KQA8 63 aa6.77□□□□□ -1.33
CSMD1-216ENST00000602557 WI2-2373I1.2A0A1W2PRP0 233 aa6.77□□□□□ -1.33
CSMD1-216ENST00000602557 ETV2O00321 342 aaPredicted RBP6.77□□□□□ -1.33
CSMD1-216ENST00000602557 TIMM17BO60830 172 aa6.77□□□□□ -1.33
CSMD1-216ENST00000602557 INSL3P51460 131 aa6.77□□□□□ -1.33
CSMD1-216ENST00000602557 SCXQ7RTU7 201 aa6.77□□□□□ -1.33
CSMD1-216ENST00000602557 GDF5OSQ5U4N7 250 aa6.77□□□□□ -1.33
CSMD1-216ENST00000602557 ENHOQ6UWT2 76 aa6.77□□□□□ -1.33
CSMD1-216ENST00000602557 SP5Q6BEB4 398 aaPredicted RBP6.77□□□□□ -1.33
CSMD1-216ENST00000602557 LINC00311Q8N616 119 aa6.77□□□□□ -1.33
CSMD1-216ENST00000602557 RMI2Q96E14 147 aa6.76□□□□□ -1.33
CSMD1-216ENST00000602557 ZNF503Q96F45 646 aa6.76□□□□□ -1.33
CSMD1-216ENST00000602557 IGHV4OR15-8A0A075B7B6 117 aa6.76□□□□□ -1.33
CSMD1-216ENST00000602557 A0A087WW49 117 aa6.76□□□□□ -1.33
CSMD1-216ENST00000602557 K7ENP7 123 aa6.76□□□□□ -1.33
CSMD1-216ENST00000602557 PRR20EP86478 221 aa6.76□□□□□ -1.33
CSMD1-216ENST00000602557 PRR20CP86479 221 aa6.76□□□□□ -1.33
CSMD1-216ENST00000602557 PRR20DP86480 221 aa6.76□□□□□ -1.33
CSMD1-216ENST00000602557 PRR20BP86481 221 aa6.76□□□□□ -1.33
CSMD1-216ENST00000602557 PRR20AP86496 221 aa6.76□□□□□ -1.33
CSMD1-216ENST00000602557 IGKV1OR2-108A0A075B7D4 117 aa6.76□□□□□ -1.33
CSMD1-216ENST00000602557 C11orf86A6NJI1 115 aa6.76□□□□□ -1.33
CSMD1-216ENST00000602557 NFE4Q86UQ8 179 aa6.76□□□□□ -1.33
CSMD1-216ENST00000602557 PROP1O75360 226 aa6.76□□□□□ -1.33
CSMD1-216ENST00000602557 CXCL5P42830 114 aa6.76□□□□□ -1.33
CSMD1-216ENST00000602557 RPL18AQ02543 176 aaKnown RBP6.76□□□□□ -1.33
CSMD1-216ENST00000602557 VPREB3Q9UKI3 123 aa6.76□□□□□ -1.33
CSMD1-216ENST00000602557 MRPS12O15235 138 aaKnown RBP6.75□□□□□ -1.33
CSMD1-216ENST00000602557 LHBP01229 141 aa6.75□□□□□ -1.33
CSMD1-216ENST00000602557 UBE2BP63146 152 aa6.75□□□□□ -1.33
CSMD1-216ENST00000602557 IGKV2D-24A0A075B6R9 120 aa6.75□□□□□ -1.33
CSMD1-216ENST00000602557 LRRC75A-AS1Q8N1F1 130 aa6.75□□□□□ -1.33
CSMD1-216ENST00000602557 FAM215AQ9Y5M1 114 aa6.75□□□□□ -1.33
CSMD1-216ENST00000602557 RSPO1Q2MKA7 263 aaPredicted RBP6.75□□□□□ -1.33
CSMD1-216ENST00000602557 C20orf173Q96LM9 149 aa6.75□□□□□ -1.33
CSMD1-216ENST00000602557 OPRPNQ99935 248 aaPredicted RBP6.75□□□□□ -1.33
CSMD1-216ENST00000602557 CTRLP40313 264 aa6.74□□□□□ -1.33
CSMD1-216ENST00000602557 IGLV10-54A0A075B6I4 117 aa6.74□□□□□ -1.33
CSMD1-216ENST00000602557 C5orf38Q86SI9 138 aa6.74□□□□□ -1.33
CSMD1-216ENST00000602557 DKK4Q9UBT3 224 aa6.74□□□□□ -1.33
CSMD1-216ENST00000602557 TOMM6Q96B49 74 aa6.74□□□□□ -1.33
CSMD1-216ENST00000602557 PRR4Q16378 134 aa6.74□□□□□ -1.33
CSMD1-216ENST00000602557 K7EM74 188 aa6.74□□□□□ -1.33
CSMD1-216ENST00000602557 IGLV1-44P01699 117 aa6.74□□□□□ -1.33
CSMD1-216ENST00000602557 GP9P14770 177 aa6.74□□□□□ -1.33
CSMD1-216ENST00000602557 H0YGX0 51 aa6.74□□□□□ -1.33
CSMD1-216ENST00000602557 IGLV2-23P01705 113 aa6.73□□□□□ -1.33
CSMD1-216ENST00000602557 IGFL3Q6UXB1 125 aa6.73□□□□□ -1.33
CSMD1-216ENST00000602557 PIFOQ8TCI5 191 aa6.73□□□□□ -1.33
CSMD1-216ENST00000602557 AGPAT4-IT1Q9H0P7 198 aa6.73□□□□□ -1.33
CSMD1-216ENST00000602557 HIST2H2BCQ6DN03 193 aa6.73□□□□□ -1.33
CSMD1-216ENST00000602557 HIST2H2BDQ6DRA6 164 aa6.73□□□□□ -1.33
CSMD1-216ENST00000602557 IGHV4-59P01825 116 aa6.73□□□□□ -1.33
CSMD1-216ENST00000602557 GYPEP15421 78 aa6.73□□□□□ -1.33
CSMD1-216ENST00000602557 J3QLI3 93 aa6.73□□□□□ -1.33
CSMD1-216ENST00000602557 DAZ2Q13117 558 aaKnown RBP6.73□□□□□ -1.33
CSMD1-216ENST00000602557 DAZ4Q86SG3 579 aaKnown RBP6.73□□□□□ -1.33
CSMD1-216ENST00000602557 DAZ3Q9NR90 486 aaKnown RBP6.73□□□□□ -1.33
CSMD1-216ENST00000602557 ELANEP08246 267 aa6.73□□□□□ -1.33
CSMD1-216ENST00000602557 SLURP1P55000 103 aa6.72□□□□□ -1.33
CSMD1-216ENST00000602557 ZNF491Q8N8L2 437 aa6.72□□□□□ -1.33
CSMD1-216ENST00000602557 SLPIP03973 132 aa6.72□□□□□ -1.33
CSMD1-216ENST00000602557 GRNP28799 593 aaKnown RBP6.72□□□□□ -1.33
CSMD1-216ENST00000602557 PIK3CD-AS1Q5SR53 167 aa6.72□□□□□ -1.33
CSMD1-216ENST00000602557 A6NED7 52 aa6.72□□□□□ -1.33
CSMD1-216ENST00000602557 APRG1Q8IVJ8 170 aa6.72□□□□□ -1.33
CSMD1-216ENST00000602557 RITA1Q96K30 269 aa6.72□□□□□ -1.33
CSMD1-216ENST00000602557 TP53TG3Q9ULZ0 132 aa6.72□□□□□ -1.33
CSMD1-216ENST00000602557 MAPKAPK5-AS1Q8N8E1 139 aa6.72□□□□□ -1.33
CSMD1-216ENST00000602557 SERP2Q8N6R1 65 aa6.71□□□□□ -1.33
CSMD1-216ENST00000602557 PRSS33Q8NF86 280 aa6.71□□□□□ -1.33
CSMD1-216ENST00000602557 LOC107984640A0A0U1RRK4 108 aa6.71□□□□□ -1.34
CSMD1-216ENST00000602557 SPRNQ5BIV9 151 aa6.71□□□□□ -1.34
CSMD1-216ENST00000602557 FAM19A5Q7Z5A7 132 aaPredicted RBP6.71□□□□□ -1.34
CSMD1-216ENST00000602557 LTBP2Q14767 1821 aa6.71□□□□□ -1.34
CSMD1-216ENST00000602557 YPEL4Q96NS1 127 aa6.71□□□□□ -1.34
CSMD1-216ENST00000602557 KLK5Q9Y337 293 aaPredicted RBP6.71□□□□□ -1.34
CSMD1-216ENST00000602557 CCL24O00175 119 aa6.71□□□□□ -1.34
CSMD1-216ENST00000602557 TRIAP1O43715 76 aa6.71□□□□□ -1.34
CSMD1-216ENST00000602557 ETDCA0A1B0GVM5 59 aa6.7□□□□□ -1.34
CSMD1-216ENST00000602557 LRCOL1A6NCL2 159 aa6.7□□□□□ -1.34
CSMD1-216ENST00000602557 FAM167A-AS1Q96KT0 104 aa6.7□□□□□ -1.34
CSMD1-216ENST00000602557 MIAQ16674 131 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms