RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 SPANXN1Q5VSR9 72 aa8.54□□□□□ -1.04
RPS28-204ENST00000602140 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.54□□□□□ -1.04
RPS28-204ENST00000602140 FAM213BQ8TBF2 198 aa8.54□□□□□ -1.04
RPS28-204ENST00000602140 MBD3L1Q8WWY6 194 aa8.54□□□□□ -1.04
RPS28-204ENST00000602140 SSBP4Q9BWG4 385 aaPredicted RBP8.54□□□□□ -1.04
RPS28-204ENST00000602140 USP17L23D6RBM5 183 aa8.53□□□□□ -1.04
RPS28-204ENST00000602140 PFDN1O60925 122 aa8.53□□□□□ -1.04
RPS28-204ENST00000602140 IGLV2-8P01709 118 aa8.53□□□□□ -1.04
RPS28-204ENST00000602140 OR5AL1P0C617 328 aa8.53□□□□□ -1.04
RPS28-204ENST00000602140 NTM-AS1Q6ZSK4 140 aa8.53□□□□□ -1.04
RPS28-204ENST00000602140 UMAD1C9J7I0 102 aa8.52□□□□□ -1.05
RPS28-204ENST00000602140 PKIAP61925 76 aa8.52□□□□□ -1.05
RPS28-204ENST00000602140 MIAQ16674 131 aa8.52□□□□□ -1.05
RPS28-204ENST00000602140 CLPSL2Q6UWE3 100 aa8.52□□□□□ -1.05
RPS28-204ENST00000602140 KCNRGQ8N5I3 272 aa8.52□□□□□ -1.05
RPS28-204ENST00000602140 OXTP01178 125 aa8.51□□□□□ -1.05
RPS28-204ENST00000602140 PRSS1P07477 247 aa8.51□□□□□ -1.05
RPS28-204ENST00000602140 SMIM17P0DL12 118 aa8.51□□□□□ -1.05
RPS28-204ENST00000602140 GAGE6Q13070 117 aa8.51□□□□□ -1.05
RPS28-204ENST00000602140 ZNF345Q14585 488 aa8.51□□□□□ -1.05
RPS28-204ENST00000602140 TMEM97Q5BJF2 176 aa8.51□□□□□ -1.05
RPS28-204ENST00000602140 TMUB2Q71RG4 321 aa8.51□□□□□ -1.05
RPS28-204ENST00000602140 DERL1Q9BUN8 251 aa8.51□□□□□ -1.05
RPS28-204ENST00000602140 VAX2Q9UIW0 290 aa8.51□□□□□ -1.05
RPS28-204ENST00000602140 RPL37AP61513 92 aaKnown RBP8.5□□□□□ -1.05
RPS28-204ENST00000602140 RBX1P62877 108 aa8.5□□□□□ -1.05
RPS28-204ENST00000602140 RGS21Q2M5E4 152 aa8.5□□□□□ -1.05
RPS28-204ENST00000602140 SERTAD4-AS1Q5TG53 156 aa8.5□□□□□ -1.05
RPS28-204ENST00000602140 LINC00269Q8N2A0 174 aa8.5□□□□□ -1.05
RPS28-204ENST00000602140 AP1S3Q96PC3 154 aa8.5□□□□□ -1.05
RPS28-204ENST00000602140 PRR34Q9NV39 138 aa8.5□□□□□ -1.05
RPS28-204ENST00000602140 KIF25-AS1Q9Y6Z4 181 aa8.5□□□□□ -1.05
RPS28-204ENST00000602140 FAT3Q8TDW7 4589 aa8.5□□□□□ -1.05
RPS28-204ENST00000602140 TRBV25-1A0A075B6N4 114 aa8.49□□□□□ -1.05
RPS28-204ENST00000602140 H2AFB1P0C5Y9 115 aa8.49□□□□□ -1.05
RPS28-204ENST00000602140 RPL35P42766 123 aaKnown RBP8.49□□□□□ -1.05
RPS28-204ENST00000602140 DGAT2L7PQ6IED9 249 aa8.49□□□□□ -1.05
RPS28-204ENST00000602140 MGPP08493 103 aa8.48□□□□□ -1.05
RPS28-204ENST00000602140 GZMBP10144 247 aa8.48□□□□□ -1.05
RPS28-204ENST00000602140 KRTAP26-1Q6PEX3 210 aa8.48□□□□□ -1.05
RPS28-204ENST00000602140 C9orf163Q8N9P6 203 aa8.48□□□□□ -1.05
RPS28-204ENST00000602140 IGHV1-24A0A0C4DH33 117 aa8.47□□□□□ -1.05
RPS28-204ENST00000602140 A0A0D9SG52 128 aa8.47□□□□□ -1.05
RPS28-204ENST00000602140 KANTRA0A1W2PQU2 76 aa8.47□□□□□ -1.05
RPS28-204ENST00000602140 HMSDA8MTL9 139 aa8.47□□□□□ -1.05
RPS28-204ENST00000602140 BCL2L11O43521 198 aa8.47□□□□□ -1.05
RPS28-204ENST00000602140 IQCJQ1A5X6 159 aa8.47□□□□□ -1.05
RPS28-204ENST00000602140 TPPP3Q9BW30 176 aa8.47□□□□□ -1.05
RPS28-204ENST00000602140 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.47□□□□□ -1.05
RPS28-204ENST00000602140 IGLV10-54A0A075B6I4 117 aa8.46□□□□□ -1.06
RPS28-204ENST00000602140 M0QY20 66 aa8.46□□□□□ -1.06
RPS28-204ENST00000602140 CCL20P78556 96 aa8.46□□□□□ -1.06
RPS28-204ENST00000602140 FER1L6-AS1Q8NA97 138 aa8.46□□□□□ -1.06
RPS28-204ENST00000602140 DAZAP1Q96EP5 407 aaKnown RBP8.46□□□□□ -1.06
RPS28-204ENST00000602140 GNG13Q9P2W3 67 aa8.46□□□□□ -1.06
RPS28-204ENST00000602140 H7C1H1 209 aa8.45□□□□□ -1.06
RPS28-204ENST00000602140 PANO1I0J062 215 aa8.45□□□□□ -1.06
RPS28-204ENST00000602140 IGLC6P0CF74 106 aa8.45□□□□□ -1.06
RPS28-204ENST00000602140 HNRNPA3P51991 378 aaKnown RBP8.45□□□□□ -1.06
RPS28-204ENST00000602140 EIF5AP63241 154 aaKnown RBP8.45□□□□□ -1.06
RPS28-204ENST00000602140 REG3AQ06141 175 aa8.45□□□□□ -1.06
RPS28-204ENST00000602140 CENPWQ5EE01 88 aa8.45□□□□□ -1.06
RPS28-204ENST00000602140 SUMO4Q6EEV6 95 aa8.45□□□□□ -1.06
RPS28-204ENST00000602140 SDIM1Q6ZPB5 146 aa8.45□□□□□ -1.06
RPS28-204ENST00000602140 OR2D3Q8NGH3 330 aa8.45□□□□□ -1.06
RPS28-204ENST00000602140 C11orf52Q96A22 123 aa8.45□□□□□ -1.06
RPS28-204ENST00000602140 MANBALQ9NQG1 85 aa8.45□□□□□ -1.06
RPS28-204ENST00000602140 NKX2-5P52952 324 aaPredicted RBP8.44□□□□□ -1.06
RPS28-204ENST00000602140 RPS20P60866 119 aaKnown RBP8.44□□□□□ -1.06
RPS28-204ENST00000602140 C4orf48Q5BLP8 95 aa8.44□□□□□ -1.06
RPS28-204ENST00000602140 C20orf203Q8NBC4 194 aa8.44□□□□□ -1.06
RPS28-204ENST00000602140 CLRN3Q8NCR9 226 aa8.44□□□□□ -1.06
RPS28-204ENST00000602140 hDV102S1A0JD36 115 aa8.43□□□□□ -1.06
RPS28-204ENST00000602140 RAB19A4D1S5 217 aa8.43□□□□□ -1.06
RPS28-204ENST00000602140 C19orf71A6NCJ1 209 aa8.43□□□□□ -1.06
RPS28-204ENST00000602140 CACNG7P62955 275 aa8.43□□□□□ -1.06
RPS28-204ENST00000602140 RASL11AQ6T310 242 aa8.43□□□□□ -1.06
RPS28-204ENST00000602140 TMEM243Q9BU79 118 aa8.43□□□□□ -1.06
RPS28-204ENST00000602140 HMCN2Q8NDA2 5059 aa8.43□□□□□ -1.06
RPS28-204ENST00000602140 PKHD1L1Q86WI1 4243 aa8.43□□□□□ -1.06
RPS28-204ENST00000602140 IGLV4-60A0A075B6I1 120 aa8.42□□□□□ -1.06
RPS28-204ENST00000602140 TRAV8-4A0A0B4J246 113 aa8.42□□□□□ -1.06
RPS28-204ENST00000602140 A0A1B0GUV1 79 aa8.42□□□□□ -1.06
RPS28-204ENST00000602140 P01737 135 aa8.42□□□□□ -1.06
RPS28-204ENST00000602140 RAB5CP51148 216 aa8.42□□□□□ -1.06
RPS28-204ENST00000602140 CNBPP62633 177 aaKnown RBP8.42□□□□□ -1.06
RPS28-204ENST00000602140 GFRA4Q9GZZ7 299 aa8.42□□□□□ -1.06
RPS28-204ENST00000602140 PLA2G2DQ9UNK4 145 aa8.42□□□□□ -1.06
RPS28-204ENST00000602140 TRAV1-1A0A0B4J248 108 aa8.41□□□□□ -1.06
RPS28-204ENST00000602140 XKRY2A2RUG3 117 aa8.41□□□□□ -1.06
RPS28-204ENST00000602140 F2Z2F3 143 aa8.41□□□□□ -1.06
RPS28-204ENST00000602140 GNG4P50150 75 aa8.41□□□□□ -1.06
RPS28-204ENST00000602140 LYZL1Q6UWQ5 148 aa8.41□□□□□ -1.06
RPS28-204ENST00000602140 SMIM12Q96EX1 92 aa8.41□□□□□ -1.06
RPS28-204ENST00000602140 NIT2Q9NQR4 276 aa8.41□□□□□ -1.06
RPS28-204ENST00000602140 IFNA1P01562 189 aa8.4□□□□□ -1.06
RPS28-204ENST00000602140 TRGC1P0CF51 173 aa8.4□□□□□ -1.06
RPS28-204ENST00000602140 NTF3P20783 257 aa8.4□□□□□ -1.06
RPS28-204ENST00000602140 DPH3Q96FX2 82 aa8.4□□□□□ -1.06
RPS28-204ENST00000602140 PGLYRP4Q96LB8 373 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms