RNA–Protein interactions for RNA: ENST00000601592.5

USE1-209, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-209ENST00000601592 H7C1H1 209 aa8.68□□□□□ -1.02
USE1-209ENST00000601592 CT83Q5H943 113 aa8.68□□□□□ -1.02
USE1-209ENST00000601592 WDR73Q6P4I2 378 aa8.68□□□□□ -1.02
USE1-209ENST00000601592 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.68□□□□□ -1.02
USE1-209ENST00000601592 OR10G8Q8NGN5 311 aa8.68□□□□□ -1.02
USE1-209ENST00000601592 ISOC2Q96AB3 205 aa8.68□□□□□ -1.02
USE1-209ENST00000601592 URGCP-MRPS24S4R325 110 aa8.68□□□□□ -1.02
USE1-209ENST00000601592 K7EP13 123 aa8.67□□□□□ -1.02
USE1-209ENST00000601592 BTF3P20290 206 aaKnown RBP8.67□□□□□ -1.02
USE1-209ENST00000601592 NFE4Q86UQ8 179 aa8.67□□□□□ -1.02
USE1-209ENST00000601592 Q8N3U1 123 aa8.67□□□□□ -1.02
USE1-209ENST00000601592 TSKUQ8WUA8 353 aa8.67□□□□□ -1.02
USE1-209ENST00000601592 CNFNQ9BYD5 112 aa8.67□□□□□ -1.02
USE1-209ENST00000601592 Q9HAA7 133 aa8.67□□□□□ -1.02
USE1-209ENST00000601592 HIGD1CA8MV81 97 aa8.66□□□□□ -1.02
USE1-209ENST00000601592 M0QY20 66 aa8.66□□□□□ -1.02
USE1-209ENST00000601592 HECTD4Q9Y4D8 3996 aa8.65□□□□□ -1.02
USE1-209ENST00000601592 KCNIP4Q6PIL6 250 aa8.65□□□□□ -1.02
USE1-209ENST00000601592 RASL11AQ6T310 242 aa8.65□□□□□ -1.02
USE1-209ENST00000601592 GFRA4Q9GZZ7 299 aa8.65□□□□□ -1.02
USE1-209ENST00000601592 V9GYV3 84 aa8.65□□□□□ -1.02
USE1-209ENST00000601592 A0A087WX48 190 aa8.64□□□□□ -1.03
USE1-209ENST00000601592 TRAV26-2A0A0B4J265 109 aa8.64□□□□□ -1.03
USE1-209ENST00000601592 A0A1B0GUT8 65 aa8.64□□□□□ -1.03
USE1-209ENST00000601592 TMEM262E9PQX1 116 aa8.64□□□□□ -1.03
USE1-209ENST00000601592 PSCAO43653 123 aa8.64□□□□□ -1.03
USE1-209ENST00000601592 FOXA3P55318 350 aaPredicted RBP8.64□□□□□ -1.03
USE1-209ENST00000601592 CLLU1Q5K131 121 aa8.64□□□□□ -1.03
USE1-209ENST00000601592 Q6ZRN7 208 aaPredicted RBP8.64□□□□□ -1.03
USE1-209ENST00000601592 DAZ4Q86SG3 579 aaKnown RBP8.64□□□□□ -1.03
USE1-209ENST00000601592 DNAJC30Q96LL9 226 aa8.64□□□□□ -1.03
USE1-209ENST00000601592 DAZ3Q9NR90 486 aaKnown RBP8.64□□□□□ -1.03
USE1-209ENST00000601592 TRBV6-8A0A0A6YYG3 113 aa8.63□□□□□ -1.03
USE1-209ENST00000601592 IBA57-AS1B1ANH7 110 aa8.63□□□□□ -1.03
USE1-209ENST00000601592 IFITM2Q01629 132 aa8.63□□□□□ -1.03
USE1-209ENST00000601592 NIT1Q86X76 327 aa8.63□□□□□ -1.03
USE1-209ENST00000601592 CHCHD5Q9BSY4 110 aa8.63□□□□□ -1.03
USE1-209ENST00000601592 PKD1P98161 4303 aa8.63□□□□□ -1.03
USE1-209ENST00000601592 FAM231BA6NCW3 169 aa8.62□□□□□ -1.03
USE1-209ENST00000601592 EREGO14944 169 aa8.62□□□□□ -1.03
USE1-209ENST00000601592 RIGQ13278 110 aa8.62□□□□□ -1.03
USE1-209ENST00000601592 TMEM97Q5BJF2 176 aa8.62□□□□□ -1.03
USE1-209ENST00000601592 GATD1Q8NB37 220 aa8.62□□□□□ -1.03
USE1-209ENST00000601592 NUP35Q8NFH5 326 aa8.62□□□□□ -1.03
USE1-209ENST00000601592 DEFB104AQ8WTQ1 72 aa8.62□□□□□ -1.03
USE1-209ENST00000601592 NIT2Q9NQR4 276 aa8.62□□□□□ -1.03
USE1-209ENST00000601592 NAT8BQ9UHF3 227 aa8.62□□□□□ -1.03
USE1-209ENST00000601592 BIRC6Q9NR09 4857 aa8.62□□□□□ -1.03
USE1-209ENST00000601592 TRBV25-1A0A075B6N4 114 aa8.61□□□□□ -1.03
USE1-209ENST00000601592 LAGE3Q14657 143 aa8.61□□□□□ -1.03
USE1-209ENST00000601592 SPATA12Q7Z6I5 190 aa8.61□□□□□ -1.03
USE1-209ENST00000601592 RPL39LQ96EH5 51 aaKnown RBP8.61□□□□□ -1.03
USE1-209ENST00000601592 KLK12Q9UKR0 248 aa8.61□□□□□ -1.03
USE1-209ENST00000601592 C16orf90A8MZG2 172 aa8.6□□□□□ -1.03
USE1-209ENST00000601592 GAGE6Q13070 117 aa8.6□□□□□ -1.03
USE1-209ENST00000601592 NTM-AS1Q6ZSK4 140 aa8.6□□□□□ -1.03
USE1-209ENST00000601592 PKHD1P08F94 4074 aa8.59□□□□□ -1.03
USE1-209ENST00000601592 TRAV8-3A0A0A6YYJ7 113 aa8.59□□□□□ -1.03
USE1-209ENST00000601592 IGHV1-24A0A0C4DH33 117 aa8.59□□□□□ -1.03
USE1-209ENST00000601592 SMIM27A0A1W2PRY6 76 aa8.59□□□□□ -1.03
USE1-209ENST00000601592 ELOBQ15370 118 aa8.59□□□□□ -1.03
USE1-209ENST00000601592 MPV17L2Q567V2 206 aa8.59□□□□□ -1.03
USE1-209ENST00000601592 CHCHD7Q9BUK0 85 aa8.59□□□□□ -1.03
USE1-209ENST00000601592 TMEM191AQ9H0A3 160 aa8.59□□□□□ -1.03
USE1-209ENST00000601592 ANGP03950 147 aaKnown RBP8.58□□□□□ -1.04
USE1-209ENST00000601592 PKIAP61925 76 aa8.58□□□□□ -1.04
USE1-209ENST00000601592 COTL1Q14019 142 aa8.58□□□□□ -1.04
USE1-209ENST00000601592 AMN1Q8IY45 258 aa8.58□□□□□ -1.04
USE1-209ENST00000601592 FRZBQ92765 325 aa8.58□□□□□ -1.04
USE1-209ENST00000601592 UBE2WQ96B02 151 aa8.58□□□□□ -1.04
USE1-209ENST00000601592 TMEM243Q9BU79 118 aa8.58□□□□□ -1.04
USE1-209ENST00000601592 TM2D2Q9BX73 214 aa8.58□□□□□ -1.04
USE1-209ENST00000601592 IGKV2D-24A0A075B6R9 120 aa8.57□□□□□ -1.04
USE1-209ENST00000601592 A0A087WTM6 91 aa8.57□□□□□ -1.04
USE1-209ENST00000601592 UBE2L6O14933 153 aa8.57□□□□□ -1.04
USE1-209ENST00000601592 CRPP02741 224 aa8.57□□□□□ -1.04
USE1-209ENST00000601592 AMTP48728 403 aa8.57□□□□□ -1.04
USE1-209ENST00000601592 CAMPP49913 170 aa8.57□□□□□ -1.04
USE1-209ENST00000601592 KRTAP10-2P60368 255 aa8.57□□□□□ -1.04
USE1-209ENST00000601592 PNRC1Q12796 327 aaPredicted RBP8.57□□□□□ -1.04
USE1-209ENST00000601592 IQCJQ1A5X6 159 aa8.57□□□□□ -1.04
USE1-209ENST00000601592 MRPL54Q6P161 138 aaKnown RBP8.57□□□□□ -1.04
USE1-209ENST00000601592 ATRAIDQ6UW56 229 aa8.57□□□□□ -1.04
USE1-209ENST00000601592 Q8N976 141 aa8.57□□□□□ -1.04
USE1-209ENST00000601592 RMI2Q96E14 147 aa8.57□□□□□ -1.04
USE1-209ENST00000601592 PPP1R2P9O14990 202 aa8.56□□□□□ -1.04
USE1-209ENST00000601592 NCR2O95944 276 aa8.56□□□□□ -1.04
USE1-209ENST00000601592 RAB4AP20338 218 aa8.56□□□□□ -1.04
USE1-209ENST00000601592 FUSP35637 526 aaKnown RBP eCLIP8.56□□□□□ -1.04
USE1-209ENST00000601592 CLPSL2Q6UWE3 100 aa8.56□□□□□ -1.04
USE1-209ENST00000601592 RNF185Q96GF1 192 aa8.56□□□□□ -1.04
USE1-209ENST00000601592 DNAH11Q96DT5 4516 aa8.55□□□□□ -1.04
USE1-209ENST00000601592 SDHAF1A6NFY7 115 aa8.55□□□□□ -1.04
USE1-209ENST00000601592 SMKR1H3BMG3 65 aa8.55□□□□□ -1.04
USE1-209ENST00000601592 GAS8-AS1O95177 125 aa8.55□□□□□ -1.04
USE1-209ENST00000601592 MT-ND4LP03901 98 aa8.55□□□□□ -1.04
USE1-209ENST00000601592 PMCHP20382 165 aa8.55□□□□□ -1.04
USE1-209ENST00000601592 RBX1P62877 108 aa8.55□□□□□ -1.04
USE1-209ENST00000601592 UQCC3Q6UW78 93 aa8.55□□□□□ -1.04
USE1-209ENST00000601592 COMMD7Q86VX2 200 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms