RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 MUC21A0A140T8X8 626 aa11.07□□□□□ -0.64
SCAF1-204ENST00000601038 F5H697 171 aa11.07□□□□□ -0.64
SCAF1-204ENST00000601038 CRPP02741 224 aa11.07□□□□□ -0.64
SCAF1-204ENST00000601038 H2AFB1P0C5Y9 115 aa11.07□□□□□ -0.64
SCAF1-204ENST00000601038 PKIAP61925 76 aa11.07□□□□□ -0.64
SCAF1-204ENST00000601038 TMEM97Q5BJF2 176 aa11.07□□□□□ -0.64
SCAF1-204ENST00000601038 CIRBP-AS1Q8TBR5 109 aa11.07□□□□□ -0.64
SCAF1-204ENST00000601038 CHCHD5Q9BSY4 110 aa11.07□□□□□ -0.64
SCAF1-204ENST00000601038 ANGP03950 147 aaKnown RBP11.06□□□□□ -0.64
SCAF1-204ENST00000601038 VAX2Q9UIW0 290 aa11.06□□□□□ -0.64
SCAF1-204ENST00000601038 KIF25-AS1Q9Y6Z4 181 aa11.06□□□□□ -0.64
SCAF1-204ENST00000601038 DNAH8Q96JB1 4490 aa11.05□□□□□ -0.64
SCAF1-204ENST00000601038 KANTRA0A1W2PQU2 76 aa11.05□□□□□ -0.64
SCAF1-204ENST00000601038 BCL2L11O43521 198 aa11.05□□□□□ -0.64
SCAF1-204ENST00000601038 EIF5AP63241 154 aaKnown RBP11.05□□□□□ -0.64
SCAF1-204ENST00000601038 MIAQ16674 131 aa11.05□□□□□ -0.64
SCAF1-204ENST00000601038 NTM-AS1Q6ZSK4 140 aa11.05□□□□□ -0.64
SCAF1-204ENST00000601038 SMIM17P0DL12 118 aa11.04□□□□□ -0.64
SCAF1-204ENST00000601038 RPL35P42766 123 aaKnown RBP11.04□□□□□ -0.64
SCAF1-204ENST00000601038 KRTAP10-4P60372 401 aaPredicted RBP11.04□□□□□ -0.64
SCAF1-204ENST00000601038 SSTP61278 116 aa11.04□□□□□ -0.64
SCAF1-204ENST00000601038 USP17L23D6RBM5 183 aa11.03□□□□□ -0.64
SCAF1-204ENST00000601038 AP1S3Q96PC3 154 aa11.03□□□□□ -0.64
SCAF1-204ENST00000601038 PRR34Q9NV39 138 aa11.03□□□□□ -0.64
SCAF1-204ENST00000601038 IGLV2-8P01709 118 aa11.02□□□□□ -0.65
SCAF1-204ENST00000601038 C11orf52Q96A22 123 aa11.02□□□□□ -0.65
SCAF1-204ENST00000601038 DERL1Q9BUN8 251 aa11.02□□□□□ -0.65
SCAF1-204ENST00000601038 MANBALQ9NQG1 85 aa11.02□□□□□ -0.65
SCAF1-204ENST00000601038 TRBV25-1A0A075B6N4 114 aa11.01□□□□□ -0.65
SCAF1-204ENST00000601038 HLA-DQA1P01909 254 aa11.01□□□□□ -0.65
SCAF1-204ENST00000601038 RBX1P62877 108 aa11.01□□□□□ -0.65
SCAF1-204ENST00000601038 CCL20P78556 96 aa11.01□□□□□ -0.65
SCAF1-204ENST00000601038 DGAT2L7PQ6IED9 249 aa11.01□□□□□ -0.65
SCAF1-204ENST00000601038 TRAV1-1A0A0B4J248 108 aa11□□□□□ -0.65
SCAF1-204ENST00000601038 M0QY20 66 aa11□□□□□ -0.65
SCAF1-204ENST00000601038 PRSS1P07477 247 aa11□□□□□ -0.65
SCAF1-204ENST00000601038 IGLC6P0CF74 106 aa11□□□□□ -0.65
SCAF1-204ENST00000601038 GAGE6Q13070 117 aa11□□□□□ -0.65
SCAF1-204ENST00000601038 IQCJQ1A5X6 159 aa11□□□□□ -0.65
SCAF1-204ENST00000601038 LINC00269Q8N2A0 174 aa11□□□□□ -0.65
SCAF1-204ENST00000601038 GNG13Q9P2W3 67 aa11□□□□□ -0.65
SCAF1-204ENST00000601038 H7C1H1 209 aa10.99□□□□□ -0.65
SCAF1-204ENST00000601038 RPS20P60866 119 aaKnown RBP10.99□□□□□ -0.65
SCAF1-204ENST00000601038 CENPWQ5EE01 88 aa10.99□□□□□ -0.65
SCAF1-204ENST00000601038 KRTAP26-1Q6PEX3 210 aa10.99□□□□□ -0.65
SCAF1-204ENST00000601038 FER1L6-AS1Q8NA97 138 aa10.99□□□□□ -0.65
SCAF1-204ENST00000601038 DAZAP1Q96EP5 407 aaKnown RBP10.99□□□□□ -0.65
SCAF1-204ENST00000601038 IGHV1-24A0A0C4DH33 117 aa10.98□□□□□ -0.65
SCAF1-204ENST00000601038 GZMBP10144 247 aa10.98□□□□□ -0.65
SCAF1-204ENST00000601038 C9orf163Q8N9P6 203 aa10.98□□□□□ -0.65
SCAF1-204ENST00000601038 OR2D3Q8NGH3 330 aa10.98□□□□□ -0.65
SCAF1-204ENST00000601038 TPPP3Q9BW30 176 aa10.98□□□□□ -0.65
SCAF1-204ENST00000601038 C19orf71A6NCJ1 209 aa10.97□□□□□ -0.65
SCAF1-204ENST00000601038 OXTP01178 125 aa10.97□□□□□ -0.65
SCAF1-204ENST00000601038 MGPP08493 103 aa10.97□□□□□ -0.65
SCAF1-204ENST00000601038 RAB5CP51148 216 aa10.97□□□□□ -0.65
SCAF1-204ENST00000601038 CACNG7P62955 275 aa10.97□□□□□ -0.65
SCAF1-204ENST00000601038 CLPSL2Q6UWE3 100 aa10.97□□□□□ -0.65
SCAF1-204ENST00000601038 SMIM12Q96EX1 92 aa10.97□□□□□ -0.65
SCAF1-204ENST00000601038 F2Z2F3 143 aa10.96□□□□□ -0.65
SCAF1-204ENST00000601038 TEX46H3BTG2 121 aa10.96□□□□□ -0.65
SCAF1-204ENST00000601038 SUMO4Q6EEV6 95 aa10.96□□□□□ -0.65
SCAF1-204ENST00000601038 CLRN3Q8NCR9 226 aa10.96□□□□□ -0.65
SCAF1-204ENST00000601038 XKRY2A2RUG3 117 aa10.95□□□□□ -0.66
SCAF1-204ENST00000601038 RAB19A4D1S5 217 aa10.95□□□□□ -0.66
SCAF1-204ENST00000601038 GNG4P50150 75 aa10.95□□□□□ -0.66
SCAF1-204ENST00000601038 REG3AQ06141 175 aa10.95□□□□□ -0.66
SCAF1-204ENST00000601038 EIF5AL1Q6IS14 154 aaKnown RBP10.95□□□□□ -0.66
SCAF1-204ENST00000601038 A0A1B0GUV1 79 aa10.94□□□□□ -0.66
SCAF1-204ENST00000601038 P01737 135 aa10.94□□□□□ -0.66
SCAF1-204ENST00000601038 NKX2-5P52952 324 aaPredicted RBP10.94□□□□□ -0.66
SCAF1-204ENST00000601038 MEF2BQ02080 365 aaPredicted RBP10.94□□□□□ -0.66
SCAF1-204ENST00000601038 RASL11AQ6T310 242 aa10.94□□□□□ -0.66
SCAF1-204ENST00000601038 TRAV8-4A0A0B4J246 113 aa10.93□□□□□ -0.66
SCAF1-204ENST00000601038 PDE6DO43924 150 aa10.93□□□□□ -0.66
SCAF1-204ENST00000601038 IFNA1P01562 189 aa10.93□□□□□ -0.66
SCAF1-204ENST00000601038 TRGC1P0CF51 173 aa10.93□□□□□ -0.66
SCAF1-204ENST00000601038 RPL37AP61513 92 aaKnown RBP10.93□□□□□ -0.66
SCAF1-204ENST00000601038 SERTAD4-AS1Q5TG53 156 aa10.93□□□□□ -0.66
SCAF1-204ENST00000601038 LYZL1Q6UWQ5 148 aa10.93□□□□□ -0.66
SCAF1-204ENST00000601038 SDIM1Q6ZPB5 146 aa10.93□□□□□ -0.66
SCAF1-204ENST00000601038 C20orf203Q8NBC4 194 aa10.93□□□□□ -0.66
SCAF1-204ENST00000601038 TMEM243Q9BU79 118 aa10.93□□□□□ -0.66
SCAF1-204ENST00000601038 BIN3Q9NQY0 253 aa10.93□□□□□ -0.66
SCAF1-204ENST00000601038 IGLV10-54A0A075B6I4 117 aa10.92□□□□□ -0.66
SCAF1-204ENST00000601038 NTF3P20783 257 aa10.92□□□□□ -0.66
SCAF1-204ENST00000601038 SULT1A2P50226 295 aa10.92□□□□□ -0.66
SCAF1-204ENST00000601038 C9orf62Q8N4C0 152 aa10.92□□□□□ -0.66
SCAF1-204ENST00000601038 PGLYRP4Q96LB8 373 aa10.92□□□□□ -0.66
SCAF1-204ENST00000601038 DPH3P1Q9H4G8 78 aa10.92□□□□□ -0.66
SCAF1-204ENST00000601038 NIT2Q9NQR4 276 aa10.92□□□□□ -0.66
SCAF1-204ENST00000601038 MED9Q9NWA0 146 aa10.92□□□□□ -0.66
SCAF1-204ENST00000601038 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.92□□□□□ -0.66
SCAF1-204ENST00000601038 TRBV20OR9-2A0A075B6H5 130 aa10.91□□□□□ -0.66
SCAF1-204ENST00000601038 IGLV4-60A0A075B6I1 120 aa10.91□□□□□ -0.66
SCAF1-204ENST00000601038 WDR73Q6P4I2 378 aa10.91□□□□□ -0.66
SCAF1-204ENST00000601038 CNBPP62633 177 aaKnown RBP10.9□□□□□ -0.66
SCAF1-204ENST00000601038 hDV102S1A0JD36 115 aa10.89□□□□□ -0.67
SCAF1-204ENST00000601038 PANO1I0J062 215 aa10.89□□□□□ -0.67
SCAF1-204ENST00000601038 BCL2P10415 239 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms