RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 URGCP-MRPS24S4R325 110 aa8.57□□□□□ -1.04
TGFB1-204ENST00000600196 A0A096LPF7 62 aa8.56□□□□□ -1.04
TGFB1-204ENST00000600196 IGHV3-73A0A0B4J1V6 119 aa8.56□□□□□ -1.04
TGFB1-204ENST00000600196 PRSS47A8MTI9 375 aa8.56□□□□□ -1.04
TGFB1-204ENST00000600196 TCAPO15273 167 aa8.56□□□□□ -1.04
TGFB1-204ENST00000600196 MGPP08493 103 aa8.56□□□□□ -1.04
TGFB1-204ENST00000600196 LINC00694P0DN24 101 aa8.56□□□□□ -1.04
TGFB1-204ENST00000600196 GYPEP15421 78 aa8.56□□□□□ -1.04
TGFB1-204ENST00000600196 SRIP30626 198 aa8.56□□□□□ -1.04
TGFB1-204ENST00000600196 TMEM136Q6ZRR5 245 aa8.56□□□□□ -1.04
TGFB1-204ENST00000600196 AMN1Q8IY45 258 aa8.56□□□□□ -1.04
TGFB1-204ENST00000600196 TNFRSF18Q9Y5U5 241 aa8.56□□□□□ -1.04
TGFB1-204ENST00000600196 P0DMU3 169 aa8.55□□□□□ -1.04
TGFB1-204ENST00000600196 FAM231AP0DMU4 169 aa8.55□□□□□ -1.04
TGFB1-204ENST00000600196 FAM231CP0DMU5 169 aa8.55□□□□□ -1.04
TGFB1-204ENST00000600196 UBE2D3P61077 147 aa8.55□□□□□ -1.04
TGFB1-204ENST00000600196 UBE2D2P62837 147 aa8.55□□□□□ -1.04
TGFB1-204ENST00000600196 MRPL51Q4U2R6 128 aaKnown RBP8.55□□□□□ -1.04
TGFB1-204ENST00000600196 ORMDL3Q8N138 153 aa8.55□□□□□ -1.04
TGFB1-204ENST00000600196 A0A0J9YY99 117 aa8.54□□□□□ -1.04
TGFB1-204ENST00000600196 CKS2P33552 79 aa8.54□□□□□ -1.04
TGFB1-204ENST00000600196 CCL18P55774 89 aa8.54□□□□□ -1.04
TGFB1-204ENST00000600196 NEXN-AS1Q8NBZ9 246 aa8.54□□□□□ -1.04
TGFB1-204ENST00000600196 ATP6V0E2Q8NHE4 81 aa8.54□□□□□ -1.04
TGFB1-204ENST00000600196 GTSF1LQ9H1H1 148 aa8.54□□□□□ -1.04
TGFB1-204ENST00000600196 K7EMI3 77 aa8.53□□□□□ -1.04
TGFB1-204ENST00000600196 K7EP13 123 aa8.53□□□□□ -1.04
TGFB1-204ENST00000600196 NCR2O95944 276 aa8.53□□□□□ -1.04
TGFB1-204ENST00000600196 APCSP02743 223 aa8.53□□□□□ -1.04
TGFB1-204ENST00000600196 LGALS9CQ6DKI2 356 aa8.53□□□□□ -1.04
TGFB1-204ENST00000600196 ZNRF2Q8NHG8 242 aa8.53□□□□□ -1.04
TGFB1-204ENST00000600196 ST20Q9HBF5 79 aa8.53□□□□□ -1.04
TGFB1-204ENST00000600196 TGIF2-C20orf24A0A0A6YYL0 155 aa8.52□□□□□ -1.05
TGFB1-204ENST00000600196 TRBV27A0A0K0K1C4 114 aa8.52□□□□□ -1.05
TGFB1-204ENST00000600196 VCYO14598 125 aa8.52□□□□□ -1.05
TGFB1-204ENST00000600196 NUDT3O95989 172 aa8.52□□□□□ -1.05
TGFB1-204ENST00000600196 POLR2KP53803 58 aaKnown RBP8.52□□□□□ -1.05
TGFB1-204ENST00000600196 PKIAP61925 76 aa8.52□□□□□ -1.05
TGFB1-204ENST00000600196 OR10J3Q5JRS4 329 aa8.52□□□□□ -1.05
TGFB1-204ENST00000600196 ZFAND6Q6FIF0 208 aa8.52□□□□□ -1.05
TGFB1-204ENST00000600196 LYPD5Q6UWN5 251 aa8.52□□□□□ -1.05
TGFB1-204ENST00000600196 UPK3BQ9BT76 320 aa8.52□□□□□ -1.05
TGFB1-204ENST00000600196 TRAPPC1Q9Y5R8 145 aa8.52□□□□□ -1.05
TGFB1-204ENST00000600196 GAGE12JA6NER3 117 aa8.51□□□□□ -1.05
TGFB1-204ENST00000600196 COLCA2A8K830 154 aa8.51□□□□□ -1.05
TGFB1-204ENST00000600196 GAGE1Q13065 139 aa8.51□□□□□ -1.05
TGFB1-204ENST00000600196 GAGE4Q13068 117 aa8.51□□□□□ -1.05
TGFB1-204ENST00000600196 GAGE5Q13069 117 aa8.51□□□□□ -1.05
TGFB1-204ENST00000600196 GAGE13Q4V321 117 aa8.51□□□□□ -1.05
TGFB1-204ENST00000600196 CBLN2Q8IUK8 224 aa8.51□□□□□ -1.05
TGFB1-204ENST00000600196 NRACQ8N912 160 aa8.51□□□□□ -1.05
TGFB1-204ENST00000600196 PRELID3AQ96N28 172 aa8.51□□□□□ -1.05
TGFB1-204ENST00000600196 DNAH7Q8WXX0 4024 aa8.51□□□□□ -1.05
TGFB1-204ENST00000600196 D6R8Y8 96 aa8.5□□□□□ -1.05
TGFB1-204ENST00000600196 I3L3M4 83 aa8.5□□□□□ -1.05
TGFB1-204ENST00000600196 TNFRSF6BO95407 300 aa8.5□□□□□ -1.05
TGFB1-204ENST00000600196 SUMO2P61956 95 aaKnown RBP8.5□□□□□ -1.05
TGFB1-204ENST00000600196 LELP1Q5T871 98 aa8.5□□□□□ -1.05
TGFB1-204ENST00000600196 MRPL18Q9H0U6 180 aaKnown RBP8.5□□□□□ -1.05
TGFB1-204ENST00000600196 MRPS16Q9Y3D3 137 aaKnown RBP8.5□□□□□ -1.05
TGFB1-204ENST00000600196 TRAV26-2A0A0B4J265 109 aa8.49□□□□□ -1.05
TGFB1-204ENST00000600196 SDHAF1A6NFY7 115 aa8.49□□□□□ -1.05
TGFB1-204ENST00000600196 H7C423 109 aa8.49□□□□□ -1.05
TGFB1-204ENST00000600196 G0S2P27469 103 aa8.49□□□□□ -1.05
TGFB1-204ENST00000600196 FABP9Q0Z7S8 132 aa8.49□□□□□ -1.05
TGFB1-204ENST00000600196 ESRGQ1W209 222 aa8.49□□□□□ -1.05
TGFB1-204ENST00000600196 KIR2DL4Q99706 377 aa8.49□□□□□ -1.05
TGFB1-204ENST00000600196 TMEM70Q9BUB7 260 aa8.49□□□□□ -1.05
TGFB1-204ENST00000600196 CHCHD7Q9BUK0 85 aa8.49□□□□□ -1.05
TGFB1-204ENST00000600196 DYNC2H1Q8NCM8 4307 aaKnown RBP8.49□□□□□ -1.05
TGFB1-204ENST00000600196 TRBV6-8A0A0A6YYG3 113 aa8.48□□□□□ -1.05
TGFB1-204ENST00000600196 TRAV8-6A0A0B4J262 113 aa8.48□□□□□ -1.05
TGFB1-204ENST00000600196 LOC100131303A0A0U1RQF7 123 aa8.48□□□□□ -1.05
TGFB1-204ENST00000600196 BTF3P20290 206 aaKnown RBP8.48□□□□□ -1.05
TGFB1-204ENST00000600196 RAB5AP20339 215 aa8.48□□□□□ -1.05
TGFB1-204ENST00000600196 SMAGPQ0VAQ4 97 aa8.48□□□□□ -1.05
TGFB1-204ENST00000600196 COTL1Q14019 142 aa8.48□□□□□ -1.05
TGFB1-204ENST00000600196 IQCJQ1A5X6 159 aa8.48□□□□□ -1.05
TGFB1-204ENST00000600196 ALKBH7Q9BT30 221 aaPredicted RBP8.48□□□□□ -1.05
TGFB1-204ENST00000600196 NXT2Q9NPJ8 142 aaKnown RBP8.48□□□□□ -1.05
TGFB1-204ENST00000600196 LINC01549A6NIU2 74 aa8.47□□□□□ -1.05
TGFB1-204ENST00000600196 PMCHP20382 165 aa8.47□□□□□ -1.05
TGFB1-204ENST00000600196 RPS10P46783 165 aaKnown RBP8.47□□□□□ -1.05
TGFB1-204ENST00000600196 RPL39LQ96EH5 51 aaKnown RBP8.47□□□□□ -1.05
TGFB1-204ENST00000600196 MAP1LC3AQ9H492 121 aa8.47□□□□□ -1.05
TGFB1-204ENST00000600196 Q9UF83 564 aa8.47□□□□□ -1.05
TGFB1-204ENST00000600196 TRBV25-1A0A075B6N4 114 aa8.46□□□□□ -1.06
TGFB1-204ENST00000600196 NPYP01303 97 aa8.46□□□□□ -1.06
TGFB1-204ENST00000600196 Q8N8P6 123 aa8.46□□□□□ -1.06
TGFB1-204ENST00000600196 SMIM2Q9BVW6 85 aa8.46□□□□□ -1.06
TGFB1-204ENST00000600196 IGHV1-24A0A0C4DH33 117 aa8.45□□□□□ -1.06
TGFB1-204ENST00000600196 RAB5BP61020 215 aa8.45□□□□□ -1.06
TGFB1-204ENST00000600196 TMEM18Q96B42 140 aa8.45□□□□□ -1.06
TGFB1-204ENST00000600196 LINC00588Q9Y4M8 146 aa8.45□□□□□ -1.06
TGFB1-204ENST00000600196 TRAV9-2A0A087WT02 112 aa8.44□□□□□ -1.06
TGFB1-204ENST00000600196 LINC01546A6NGU7 62 aa8.44□□□□□ -1.06
TGFB1-204ENST00000600196 SMKR1H3BMG3 65 aa8.44□□□□□ -1.06
TGFB1-204ENST00000600196 GAS8-AS1O95177 125 aa8.44□□□□□ -1.06
TGFB1-204ENST00000600196 UBE2DNLQ8IWF7 75 aa8.44□□□□□ -1.06
TGFB1-204ENST00000600196 LINC00476Q8WZB0 136 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms