RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 SNAI2O43623 268 aa13.61□□□□□ -0.23
PNKP-212ENST00000599454 HNRNPA3P51991 378 aaKnown RBP13.61□□□□□ -0.23
PNKP-212ENST00000599454 SSBP4Q9BWG4 385 aaPredicted RBP13.61□□□□□ -0.23
PNKP-212ENST00000599454 UBR4Q5T4S7 5183 aa13.6□□□□□ -0.23
PNKP-212ENST00000599454 OR5AL1P0C617 328 aa13.6□□□□□ -0.23
PNKP-212ENST00000599454 CLRN3Q8NCR9 226 aa13.6□□□□□ -0.23
PNKP-212ENST00000599454 TRBV25-1A0A075B6N4 114 aa13.59□□□□□ -0.23
PNKP-212ENST00000599454 F5H697 171 aa13.59□□□□□ -0.23
PNKP-212ENST00000599454 RBX1P62877 108 aa13.59□□□□□ -0.23
PNKP-212ENST00000599454 SPANXN1Q5VSR9 72 aa13.59□□□□□ -0.23
PNKP-212ENST00000599454 KRTAP26-1Q6PEX3 210 aa13.59□□□□□ -0.23
PNKP-212ENST00000599454 NTM-AS1Q6ZSK4 140 aa13.59□□□□□ -0.23
PNKP-212ENST00000599454 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.59□□□□□ -0.23
PNKP-212ENST00000599454 A0A0D9SG52 128 aa13.58□□□□□ -0.24
PNKP-212ENST00000599454 SDIM1Q6ZPB5 146 aa13.58□□□□□ -0.24
PNKP-212ENST00000599454 LINC00269Q8N2A0 174 aa13.58□□□□□ -0.24
PNKP-212ENST00000599454 PAGE4O60829 102 aa13.57□□□□□ -0.24
PNKP-212ENST00000599454 SMIM17P0DL12 118 aa13.57□□□□□ -0.24
PNKP-212ENST00000599454 Q6ZRU5 148 aa13.57□□□□□ -0.24
PNKP-212ENST00000599454 DERL1Q9BUN8 251 aa13.57□□□□□ -0.24
PNKP-212ENST00000599454 MLST8Q9BVC4 326 aa13.57□□□□□ -0.24
PNKP-212ENST00000599454 GAGE6Q13070 117 aa13.56□□□□□ -0.24
PNKP-212ENST00000599454 IQCJQ1A5X6 159 aa13.56□□□□□ -0.24
PNKP-212ENST00000599454 CLPSL2Q6UWE3 100 aa13.56□□□□□ -0.24
PNKP-212ENST00000599454 AP1S3Q96PC3 154 aa13.56□□□□□ -0.24
PNKP-212ENST00000599454 CNBPP62633 177 aaKnown RBP13.55□□□□□ -0.24
PNKP-212ENST00000599454 CIRBPQ14011 172 aaKnown RBP13.55□□□□□ -0.24
PNKP-212ENST00000599454 BAGE2Q86Y30 109 aa13.55□□□□□ -0.24
PNKP-212ENST00000599454 CYTL1Q9NRR1 136 aa13.55□□□□□ -0.24
PNKP-212ENST00000599454 KIF25-AS1Q9Y6Z4 181 aa13.55□□□□□ -0.24
PNKP-212ENST00000599454 IGHV1-24A0A0C4DH33 117 aa13.54□□□□□ -0.24
PNKP-212ENST00000599454 PANO1I0J062 215 aa13.54□□□□□ -0.24
PNKP-212ENST00000599454 TRAV8-4A0A0B4J246 113 aa13.53□□□□□ -0.24
PNKP-212ENST00000599454 MUC21A0A0G2JKD1 596 aa13.53□□□□□ -0.24
PNKP-212ENST00000599454 MUC21A0A140T8X8 626 aa13.53□□□□□ -0.24
PNKP-212ENST00000599454 PFDN1O60925 122 aa13.53□□□□□ -0.24
PNKP-212ENST00000599454 P01737 135 aa13.53□□□□□ -0.24
PNKP-212ENST00000599454 MT1HL1P0DM35 61 aa13.53□□□□□ -0.24
PNKP-212ENST00000599454 REG3AQ06141 175 aa13.53□□□□□ -0.24
PNKP-212ENST00000599454 SCO2A0A1W2PP80 73 aa13.52□□□□□ -0.25
PNKP-212ENST00000599454 H7C1H1 209 aa13.52□□□□□ -0.25
PNKP-212ENST00000599454 ARPC5O15511 151 aa13.52□□□□□ -0.25
PNKP-212ENST00000599454 MBD3L1Q8WWY6 194 aa13.52□□□□□ -0.25
PNKP-212ENST00000599454 RNF185Q96GF1 192 aa13.52□□□□□ -0.25
PNKP-212ENST00000599454 hDV102S1A0JD36 115 aa13.51□□□□□ -0.25
PNKP-212ENST00000599454 G3V3Q6 166 aa13.51□□□□□ -0.25
PNKP-212ENST00000599454 SFT2D1Q8WV19 159 aa13.51□□□□□ -0.25
PNKP-212ENST00000599454 AP5S1Q9NUS5 200 aa13.51□□□□□ -0.25
PNKP-212ENST00000599454 IGHV3-64A0A075B6Q5 118 aa13.5□□□□□ -0.25
PNKP-212ENST00000599454 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.5□□□□□ -0.25
PNKP-212ENST00000599454 GZMBP10144 247 aa13.5□□□□□ -0.25
PNKP-212ENST00000599454 SSTP61278 116 aa13.5□□□□□ -0.25
PNKP-212ENST00000599454 IGLV10-54A0A075B6I4 117 aa13.49□□□□□ -0.25
PNKP-212ENST00000599454 A0A1B0GUV1 79 aa13.49□□□□□ -0.25
PNKP-212ENST00000599454 UMAD1C9J7I0 102 aa13.49□□□□□ -0.25
PNKP-212ENST00000599454 M0QY20 66 aa13.49□□□□□ -0.25
PNKP-212ENST00000599454 C20orf203Q8NBC4 194 aa13.49□□□□□ -0.25
PNKP-212ENST00000599454 TMUB2Q71RG4 321 aa13.48□□□□□ -0.25
PNKP-212ENST00000599454 FAM213BQ8TBF2 198 aa13.48□□□□□ -0.25
PNKP-212ENST00000599454 TMEM243Q9BU79 118 aa13.47□□□□□ -0.25
PNKP-212ENST00000599454 MGPP08493 103 aa13.46□□□□□ -0.25
PNKP-212ENST00000599454 DPH3Q96FX2 82 aa13.46□□□□□ -0.25
PNKP-212ENST00000599454 A0A087WYN8 130 aa13.45□□□□□ -0.26
PNKP-212ENST00000599454 RPS20P60866 119 aaKnown RBP13.45□□□□□ -0.26
PNKP-212ENST00000599454 CACNG7P62955 275 aa13.45□□□□□ -0.26
PNKP-212ENST00000599454 SUMO4Q6EEV6 95 aa13.45□□□□□ -0.26
PNKP-212ENST00000599454 KCNRGQ8N5I3 272 aa13.45□□□□□ -0.26
PNKP-212ENST00000599454 SPACA4Q8TDM5 124 aa13.45□□□□□ -0.26
PNKP-212ENST00000599454 A0A1B0GV50 99 aa13.44□□□□□ -0.26
PNKP-212ENST00000599454 IGLC6P0CF74 106 aa13.44□□□□□ -0.26
PNKP-212ENST00000599454 RPL35P42766 123 aaKnown RBP13.44□□□□□ -0.26
PNKP-212ENST00000599454 ZNF345Q14585 488 aa13.44□□□□□ -0.26
PNKP-212ENST00000599454 FER1L6-AS1Q8NA97 138 aa13.44□□□□□ -0.26
PNKP-212ENST00000599454 PGLYRP4Q96LB8 373 aa13.44□□□□□ -0.26
PNKP-212ENST00000599454 BATF3Q9NR55 127 aa13.44□□□□□ -0.26
PNKP-212ENST00000599454 IGLV4-60A0A075B6I1 120 aa13.43□□□□□ -0.26
PNKP-212ENST00000599454 SLPIP03973 132 aa13.43□□□□□ -0.26
PNKP-212ENST00000599454 WDR73Q6P4I2 378 aa13.43□□□□□ -0.26
PNKP-212ENST00000599454 RASL11AQ6T310 242 aa13.43□□□□□ -0.26
PNKP-212ENST00000599454 TPPP3Q9BW30 176 aa13.43□□□□□ -0.26
PNKP-212ENST00000599454 H2AFB1P0C5Y9 115 aa13.42□□□□□ -0.26
PNKP-212ENST00000599454 NKX2-5P52952 324 aaPredicted RBP13.42□□□□□ -0.26
PNKP-212ENST00000599454 PLAC8Q9NZF1 115 aa13.42□□□□□ -0.26
PNKP-212ENST00000599454 UBE2L6O14933 153 aa13.41□□□□□ -0.26
PNKP-212ENST00000599454 CHTF8P0CG12 524 aa13.41□□□□□ -0.26
PNKP-212ENST00000599454 CFAP161Q6P656 301 aa13.41□□□□□ -0.26
PNKP-212ENST00000599454 C7orf33Q8WU49 177 aa13.41□□□□□ -0.26
PNKP-212ENST00000599454 C11orf52Q96A22 123 aa13.41□□□□□ -0.26
PNKP-212ENST00000599454 GFRA4Q9GZZ7 299 aa13.41□□□□□ -0.26
PNKP-212ENST00000599454 F2Z2F3 143 aa13.4□□□□□ -0.26
PNKP-212ENST00000599454 TRGC1P0CF51 173 aa13.4□□□□□ -0.26
PNKP-212ENST00000599454 OR2D3Q8NGH3 330 aa13.4□□□□□ -0.26
PNKP-212ENST00000599454 NIT2Q9NQR4 276 aa13.4□□□□□ -0.26
PNKP-212ENST00000599454 XKRY2A2RUG3 117 aa13.39□□□□□ -0.27
PNKP-212ENST00000599454 SULT1A2P50226 295 aa13.39□□□□□ -0.27
PNKP-212ENST00000599454 RAB5CP51148 216 aa13.39□□□□□ -0.27
PNKP-212ENST00000599454 CENPWQ5EE01 88 aa13.39□□□□□ -0.27
PNKP-212ENST00000599454 SMIM12Q96EX1 92 aa13.39□□□□□ -0.27
PNKP-212ENST00000599454 DPH3P1Q9H4G8 78 aa13.39□□□□□ -0.27
PNKP-212ENST00000599454 MANBALQ9NQG1 85 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms