RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 OR10G8Q8NGN5 311 aa9.54□□□□□ -0.88
LIG1-218ENST00000599322 NUDT11Q96G61 164 aa9.54□□□□□ -0.88
LIG1-218ENST00000599322 RPP21Q9H633 154 aaKnown RBP9.54□□□□□ -0.88
LIG1-218ENST00000599322 APOBP04114 4563 aaKnown RBP9.53□□□□□ -0.88
LIG1-218ENST00000599322 IGLC6P0CF74 106 aa9.53□□□□□ -0.88
LIG1-218ENST00000599322 WDR73Q6P4I2 378 aa9.53□□□□□ -0.88
LIG1-218ENST00000599322 DAZ4Q86SG3 579 aaKnown RBP9.53□□□□□ -0.88
LIG1-218ENST00000599322 OCC1Q8TAD7 63 aa9.53□□□□□ -0.88
LIG1-218ENST00000599322 BORCS7Q96B45 105 aa9.53□□□□□ -0.88
LIG1-218ENST00000599322 DNAJC30Q96LL9 226 aa9.53□□□□□ -0.88
LIG1-218ENST00000599322 CHCHD7Q9BUK0 85 aa9.53□□□□□ -0.88
LIG1-218ENST00000599322 DAZ3Q9NR90 486 aaKnown RBP9.53□□□□□ -0.88
LIG1-218ENST00000599322 TRBV20OR9-2A0A075B6H5 130 aa9.52□□□□□ -0.89
LIG1-218ENST00000599322 GATCO43716 136 aaKnown RBP9.52□□□□□ -0.89
LIG1-218ENST00000599322 LYZL1Q6UWQ5 148 aa9.52□□□□□ -0.89
LIG1-218ENST00000599322 LYPD6BQ8NI32 183 aa9.52□□□□□ -0.89
LIG1-218ENST00000599322 Q9UF83 564 aa9.52□□□□□ -0.89
LIG1-218ENST00000599322 TRBV6-8A0A0A6YYG3 113 aa9.51□□□□□ -0.89
LIG1-218ENST00000599322 NDUFS6O75380 124 aaKnown RBP9.51□□□□□ -0.89
LIG1-218ENST00000599322 CDK2AP2O75956 126 aa9.51□□□□□ -0.89
LIG1-218ENST00000599322 TWIST1Q15672 202 aa9.51□□□□□ -0.89
LIG1-218ENST00000599322 NIT1Q86X76 327 aa9.51□□□□□ -0.89
LIG1-218ENST00000599322 NEXN-AS1Q8NBZ9 246 aa9.51□□□□□ -0.89
LIG1-218ENST00000599322 DPH3P1Q9H4G8 78 aa9.51□□□□□ -0.89
LIG1-218ENST00000599322 A8MWL6 223 aa9.5□□□□□ -0.89
LIG1-218ENST00000599322 NTF3P20783 257 aa9.5□□□□□ -0.89
LIG1-218ENST00000599322 KRTAP10-2P60368 255 aa9.5□□□□□ -0.89
LIG1-218ENST00000599322 FAM210AQ96ND0 272 aa9.5□□□□□ -0.89
LIG1-218ENST00000599322 SMIM7Q9BQ49 75 aa9.5□□□□□ -0.89
LIG1-218ENST00000599322 CHCHD5Q9BSY4 110 aa9.5□□□□□ -0.89
LIG1-218ENST00000599322 RNASE7Q9H1E1 156 aaKnown RBP9.5□□□□□ -0.89
LIG1-218ENST00000599322 ZNF727A8MUV8 499 aa9.49□□□□□ -0.89
LIG1-218ENST00000599322 CRPP02741 224 aa9.49□□□□□ -0.89
LIG1-218ENST00000599322 Q0VG73 95 aa9.49□□□□□ -0.89
LIG1-218ENST00000599322 NTN5Q8WTR8 489 aaPredicted RBP9.49□□□□□ -0.89
LIG1-218ENST00000599322 KLK12Q9UKR0 248 aa9.49□□□□□ -0.89
LIG1-218ENST00000599322 KIF25-AS1Q9Y6Z4 181 aa9.49□□□□□ -0.89
LIG1-218ENST00000599322 DNAH5Q8TE73 4624 aa9.48□□□□□ -0.89
LIG1-218ENST00000599322 TRBV25-1A0A075B6N4 114 aa9.48□□□□□ -0.89
LIG1-218ENST00000599322 CTRLP40313 264 aa9.48□□□□□ -0.89
LIG1-218ENST00000599322 RASL11AQ6T310 242 aa9.48□□□□□ -0.89
LIG1-218ENST00000599322 FAM231DQ6ZW35 169 aa9.48□□□□□ -0.89
LIG1-218ENST00000599322 UBE2WQ96B02 151 aa9.48□□□□□ -0.89
LIG1-218ENST00000599322 IGLV5-52A0A0A0MRZ9 124 aa9.47□□□□□ -0.89
LIG1-218ENST00000599322 K7EN84 100 aa9.47□□□□□ -0.89
LIG1-218ENST00000599322 PEA15Q15121 130 aa9.47□□□□□ -0.89
LIG1-218ENST00000599322 FAM74A3Q4VXF1 159 aa9.47□□□□□ -0.89
LIG1-218ENST00000599322 SUMO4Q6EEV6 95 aa9.47□□□□□ -0.89
LIG1-218ENST00000599322 C15orf54Q8N8G6 183 aa9.47□□□□□ -0.89
LIG1-218ENST00000599322 NIT2Q9NQR4 276 aa9.47□□□□□ -0.89
LIG1-218ENST00000599322 IGKV2D-24A0A075B6R9 120 aa9.46□□□□□ -0.9
LIG1-218ENST00000599322 IGHV1-24A0A0C4DH33 117 aa9.46□□□□□ -0.9
LIG1-218ENST00000599322 M0QY20 66 aa9.46□□□□□ -0.9
LIG1-218ENST00000599322 GCSHP23434 173 aa9.46□□□□□ -0.9
LIG1-218ENST00000599322 TEX261Q6UWH6 196 aa9.46□□□□□ -0.9
LIG1-218ENST00000599322 FRZBQ92765 325 aa9.46□□□□□ -0.9
LIG1-218ENST00000599322 ANGP03950 147 aaKnown RBP9.45□□□□□ -0.9
LIG1-218ENST00000599322 SRP19P09132 144 aaKnown RBP9.45□□□□□ -0.9
LIG1-218ENST00000599322 CT83Q5H943 113 aa9.45□□□□□ -0.9
LIG1-218ENST00000599322 Q8N814 137 aa9.45□□□□□ -0.9
LIG1-218ENST00000599322 C1orf43Q9BWL3 253 aa9.45□□□□□ -0.9
LIG1-218ENST00000599322 UBE2L6O14933 153 aa9.44□□□□□ -0.9
LIG1-218ENST00000599322 TMEM241Q24JQ0 296 aa9.44□□□□□ -0.9
LIG1-218ENST00000599322 Q8N3U1 123 aa9.44□□□□□ -0.9
LIG1-218ENST00000599322 MAPKAPK5-AS1Q8N8E1 139 aa9.44□□□□□ -0.9
LIG1-218ENST00000599322 PGLYRP4Q96LB8 373 aa9.44□□□□□ -0.9
LIG1-218ENST00000599322 CNFNQ9BYD5 112 aa9.44□□□□□ -0.9
LIG1-218ENST00000599322 SMDT1Q9H4I9 107 aa9.44□□□□□ -0.9
LIG1-218ENST00000599322 LRCOL1A6NCL2 159 aa9.43□□□□□ -0.9
LIG1-218ENST00000599322 GAGE6Q13070 117 aa9.43□□□□□ -0.9
LIG1-218ENST00000599322 COTL1Q14019 142 aa9.43□□□□□ -0.9
LIG1-218ENST00000599322 LINC01551Q86U37 167 aa9.43□□□□□ -0.9
LIG1-218ENST00000599322 Q8N976 141 aa9.43□□□□□ -0.9
LIG1-218ENST00000599322 OSTCQ9NRP0 149 aa9.43□□□□□ -0.9
LIG1-218ENST00000599322 FAM231BA6NCW3 169 aa9.42□□□□□ -0.9
LIG1-218ENST00000599322 IQCJQ1A5X6 159 aa9.42□□□□□ -0.9
LIG1-218ENST00000599322 C14orf177Q52M58 125 aa9.42□□□□□ -0.9
LIG1-218ENST00000599322 ATRAIDQ6UW56 229 aa9.42□□□□□ -0.9
LIG1-218ENST00000599322 TSKUQ8WUA8 353 aa9.42□□□□□ -0.9
LIG1-218ENST00000599322 TMEM243Q9BU79 118 aa9.42□□□□□ -0.9
LIG1-218ENST00000599322 GFRA4Q9GZZ7 299 aa9.42□□□□□ -0.9
LIG1-218ENST00000599322 A0A1B0GUT8 65 aa9.41□□□□□ -0.9
LIG1-218ENST00000599322 FUSP35637 526 aaKnown RBP eCLIP9.41□□□□□ -0.9
LIG1-218ENST00000599322 RAB14P61106 215 aa9.41□□□□□ -0.9
LIG1-218ENST00000599322 MIAQ16674 131 aa9.41□□□□□ -0.9
LIG1-218ENST00000599322 MPV17L2Q567V2 206 aa9.41□□□□□ -0.9
LIG1-218ENST00000599322 GTSF1Q8WW33 167 aa9.41□□□□□ -0.9
LIG1-218ENST00000599322 AMTP48728 403 aa9.4□□□□□ -0.9
LIG1-218ENST00000599322 FOXA3P55318 350 aaPredicted RBP9.4□□□□□ -0.9
LIG1-218ENST00000599322 RBX1P62877 108 aa9.4□□□□□ -0.9
LIG1-218ENST00000599322 RIGQ13278 110 aa9.4□□□□□ -0.9
LIG1-218ENST00000599322 ADIRFQ15847 76 aa9.4□□□□□ -0.9
LIG1-218ENST00000599322 NTM-AS1Q6ZSK4 140 aa9.4□□□□□ -0.9
LIG1-218ENST00000599322 BAALCQ8WXS3 180 aa9.4□□□□□ -0.9
LIG1-218ENST00000599322 NAT8Q9UHE5 227 aa9.4□□□□□ -0.9
LIG1-218ENST00000599322 HIGD1CA8MV81 97 aa9.39□□□□□ -0.91
LIG1-218ENST00000599322 LECT2O14960 151 aa9.39□□□□□ -0.91
LIG1-218ENST00000599322 GATD1Q8NB37 220 aa9.38□□□□□ -0.91
LIG1-218ENST00000599322 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.37□□□□□ -0.91
LIG1-218ENST00000599322 NCR2O95944 276 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms