RNA–Protein interactions for RNA: ENST00000598886.1

SMG9-208, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 681 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-208ENST00000598886 UMAD1C9J7I0 102 aa10.19□□□□□ -0.78
SMG9-208ENST00000598886 AKR1C3P42330 323 aa10.19□□□□□ -0.78
SMG9-208ENST00000598886 RAB4BP61018 213 aa10.19□□□□□ -0.78
SMG9-208ENST00000598886 CST9LP1Q5W188 147 aa10.19□□□□□ -0.78
SMG9-208ENST00000598886 CIRBP-AS1Q8TBR5 109 aa10.19□□□□□ -0.78
SMG9-208ENST00000598886 MED9Q9NWA0 146 aa10.19□□□□□ -0.78
SMG9-208ENST00000598886 KIF25-AS1Q9Y6Z4 181 aa10.19□□□□□ -0.78
SMG9-208ENST00000598886 A0A087WX48 190 aa10.18□□□□□ -0.78
SMG9-208ENST00000598886 SCO2A0A1W2PP80 73 aa10.18□□□□□ -0.78
SMG9-208ENST00000598886 RBFOX3A6NFN3 312 aa10.18□□□□□ -0.78
SMG9-208ENST00000598886 MPV17L2Q567V2 206 aa10.18□□□□□ -0.78
SMG9-208ENST00000598886 DEFB104AQ8WTQ1 72 aa10.18□□□□□ -0.78
SMG9-208ENST00000598886 J3QL48 77 aa10.17□□□□□ -0.78
SMG9-208ENST00000598886 ELOBQ15370 118 aa10.17□□□□□ -0.78
SMG9-208ENST00000598886 KRTAP26-1Q6PEX3 210 aa10.17□□□□□ -0.78
SMG9-208ENST00000598886 NTM-AS1Q6ZSK4 140 aa10.17□□□□□ -0.78
SMG9-208ENST00000598886 OR5AL1P0C617 328 aa10.16□□□□□ -0.78
SMG9-208ENST00000598886 Q0VG73 95 aa10.16□□□□□ -0.78
SMG9-208ENST00000598886 VAX2Q9UIW0 290 aa10.16□□□□□ -0.78
SMG9-208ENST00000598886 S100A9P06702 114 aaKnown RBP10.15□□□□□ -0.78
SMG9-208ENST00000598886 BLOC1S1P78537 153 aa10.15□□□□□ -0.78
SMG9-208ENST00000598886 PRR34Q9NV39 138 aa10.15□□□□□ -0.78
SMG9-208ENST00000598886 MUC21A0A0G2JKD1 596 aa10.14□□□□□ -0.79
SMG9-208ENST00000598886 MUC21A0A140T8X8 626 aa10.14□□□□□ -0.79
SMG9-208ENST00000598886 ATP6V1G1O75348 118 aa10.14□□□□□ -0.79
SMG9-208ENST00000598886 IGLV2-8P01709 118 aa10.14□□□□□ -0.79
SMG9-208ENST00000598886 ZNF56Q15929 161 aa10.14□□□□□ -0.79
SMG9-208ENST00000598886 C15orf54Q8N8G6 183 aa10.14□□□□□ -0.79
SMG9-208ENST00000598886 FAM213BQ8TBF2 198 aa10.14□□□□□ -0.79
SMG9-208ENST00000598886 SFT2D1Q8WV19 159 aa10.14□□□□□ -0.79
SMG9-208ENST00000598886 C1orf43Q9BWL3 253 aa10.14□□□□□ -0.79
SMG9-208ENST00000598886 BAGE2Q86Y30 109 aa10.13□□□□□ -0.79
SMG9-208ENST00000598886 SLC7A5P1Q8MH63 180 aa10.13□□□□□ -0.79
SMG9-208ENST00000598886 LYPD6BQ8NI32 183 aa10.13□□□□□ -0.79
SMG9-208ENST00000598886 A0A1B0GV50 99 aa10.12□□□□□ -0.79
SMG9-208ENST00000598886 USP17L23D6RBM5 183 aa10.12□□□□□ -0.79
SMG9-208ENST00000598886 COMMD7Q86VX2 200 aa10.12□□□□□ -0.79
SMG9-208ENST00000598886 C11orf52Q96A22 123 aa10.12□□□□□ -0.79
SMG9-208ENST00000598886 DERL1Q9BUN8 251 aa10.12□□□□□ -0.79
SMG9-208ENST00000598886 PRSS1P07477 247 aa10.11□□□□□ -0.79
SMG9-208ENST00000598886 IGLC6P0CF74 106 aa10.11□□□□□ -0.79
SMG9-208ENST00000598886 MIAQ16674 131 aa10.11□□□□□ -0.79
SMG9-208ENST00000598886 C14orf177Q52M58 125 aa10.11□□□□□ -0.79
SMG9-208ENST00000598886 TMEM262E9PQX1 116 aa10.1□□□□□ -0.79
SMG9-208ENST00000598886 PANO1I0J062 215 aa10.1□□□□□ -0.79
SMG9-208ENST00000598886 ANGP03950 147 aaKnown RBP10.1□□□□□ -0.79
SMG9-208ENST00000598886 RPL35P42766 123 aaKnown RBP10.1□□□□□ -0.79
SMG9-208ENST00000598886 HNRNPA3P51991 378 aaKnown RBP10.1□□□□□ -0.79
SMG9-208ENST00000598886 RBX1P62877 108 aa10.1□□□□□ -0.79
SMG9-208ENST00000598886 CCL20P78556 96 aa10.1□□□□□ -0.79
SMG9-208ENST00000598886 KCNIP4Q6PIL6 250 aa10.1□□□□□ -0.79
SMG9-208ENST00000598886 CHCHD5Q9BSY4 110 aa10.1□□□□□ -0.79
SMG9-208ENST00000598886 TRAV1-1A0A0B4J248 108 aa10.09□□□□□ -0.79
SMG9-208ENST00000598886 RAB19A4D1S5 217 aa10.09□□□□□ -0.79
SMG9-208ENST00000598886 M0QY20 66 aa10.09□□□□□ -0.79
SMG9-208ENST00000598886 CRPP02741 224 aa10.09□□□□□ -0.79
SMG9-208ENST00000598886 IQCJQ1A5X6 159 aa10.09□□□□□ -0.79
SMG9-208ENST00000598886 SPANXN1Q5VSR9 72 aa10.09□□□□□ -0.79
SMG9-208ENST00000598886 UBR4Q5T4S7 5183 aa10.09□□□□□ -0.79
SMG9-208ENST00000598886 C19orf71A6NCJ1 209 aa10.08□□□□□ -0.8
SMG9-208ENST00000598886 OXTP01178 125 aa10.08□□□□□ -0.8
SMG9-208ENST00000598886 HLA-DQA1P01909 254 aa10.08□□□□□ -0.8
SMG9-208ENST00000598886 H2AFB1P0C5Y9 115 aa10.08□□□□□ -0.8
SMG9-208ENST00000598886 C9orf163Q8N9P6 203 aa10.08□□□□□ -0.8
SMG9-208ENST00000598886 AP1S3Q96PC3 154 aa10.08□□□□□ -0.8
SMG9-208ENST00000598886 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.08□□□□□ -0.8
SMG9-208ENST00000598886 TEX46H3BTG2 121 aa10.07□□□□□ -0.8
SMG9-208ENST00000598886 GZMBP10144 247 aa10.07□□□□□ -0.8
SMG9-208ENST00000598886 S100A1P23297 94 aa10.07□□□□□ -0.8
SMG9-208ENST00000598886 PKIAP61925 76 aa10.07□□□□□ -0.8
SMG9-208ENST00000598886 GAGE6Q13070 117 aa10.07□□□□□ -0.8
SMG9-208ENST00000598886 TMEM97Q5BJF2 176 aa10.07□□□□□ -0.8
SMG9-208ENST00000598886 DGAT2L7PQ6IED9 249 aa10.07□□□□□ -0.8
SMG9-208ENST00000598886 UQCC3Q6UW78 93 aa10.07□□□□□ -0.8
SMG9-208ENST00000598886 LINC00269Q8N2A0 174 aa10.07□□□□□ -0.8
SMG9-208ENST00000598886 F5H697 171 aa10.06□□□□□ -0.8
SMG9-208ENST00000598886 CENPWQ5EE01 88 aa10.06□□□□□ -0.8
SMG9-208ENST00000598886 SUMO4Q6EEV6 95 aa10.06□□□□□ -0.8
SMG9-208ENST00000598886 CLPSL2Q6UWE3 100 aa10.06□□□□□ -0.8
SMG9-208ENST00000598886 C20orf203Q8NBC4 194 aa10.06□□□□□ -0.8
SMG9-208ENST00000598886 DAZAP1Q96EP5 407 aaKnown RBP10.06□□□□□ -0.8
SMG9-208ENST00000598886 TRBV20OR9-2A0A075B6H5 130 aa10.05□□□□□ -0.8
SMG9-208ENST00000598886 TRBV25-1A0A075B6N4 114 aa10.05□□□□□ -0.8
SMG9-208ENST00000598886 SSTP61278 116 aa10.05□□□□□ -0.8
SMG9-208ENST00000598886 CIRBPQ14011 172 aaKnown RBP10.05□□□□□ -0.8
SMG9-208ENST00000598886 SDIM1Q6ZPB5 146 aa10.05□□□□□ -0.8
SMG9-208ENST00000598886 GFRA4Q9GZZ7 299 aa10.05□□□□□ -0.8
SMG9-208ENST00000598886 MANBALQ9NQG1 85 aa10.05□□□□□ -0.8
SMG9-208ENST00000598886 GNG13Q9P2W3 67 aa10.04□□□□□ -0.8
SMG9-208ENST00000598886 IGHV1-24A0A0C4DH33 117 aa10.03□□□□□ -0.8
SMG9-208ENST00000598886 RPL37AP61513 92 aaKnown RBP10.03□□□□□ -0.8
SMG9-208ENST00000598886 CNBPP62633 177 aaKnown RBP10.03□□□□□ -0.8
SMG9-208ENST00000598886 FER1L6-AS1Q8NA97 138 aa10.03□□□□□ -0.8
SMG9-208ENST00000598886 FAM210AQ96ND0 272 aa10.03□□□□□ -0.8
SMG9-208ENST00000598886 IGLV4-60A0A075B6I1 120 aa10.02□□□□□ -0.81
SMG9-208ENST00000598886 SLPIP03973 132 aa10.02□□□□□ -0.81
SMG9-208ENST00000598886 SMIM17P0DL12 118 aa10.02□□□□□ -0.81
SMG9-208ENST00000598886 REG3AQ06141 175 aa10.02□□□□□ -0.81
SMG9-208ENST00000598886 SERTAD4-AS1Q5TG53 156 aa10.02□□□□□ -0.81
SMG9-208ENST00000598886 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms