RNA–Protein interactions for RNA: ENST00000598309.1

USHBP1-208, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-208ENST00000598309 WDR73Q6P4I2 378 aa11.14□□□□□ -0.63
USHBP1-208ENST00000598309 CNFNQ9BYD5 112 aa11.14□□□□□ -0.63
USHBP1-208ENST00000598309 LRCOL1A6NCL2 159 aa11.13□□□□□ -0.63
USHBP1-208ENST00000598309 H7C1H1 209 aa11.13□□□□□ -0.63
USHBP1-208ENST00000598309 LYZL1Q6UWQ5 148 aa11.13□□□□□ -0.63
USHBP1-208ENST00000598309 DAZ4Q86SG3 579 aaKnown RBP11.13□□□□□ -0.63
USHBP1-208ENST00000598309 DAZ3Q9NR90 486 aaKnown RBP11.13□□□□□ -0.63
USHBP1-208ENST00000598309 TRBV6-8A0A0A6YYG3 113 aa11.12□□□□□ -0.63
USHBP1-208ENST00000598309 MGPP08493 103 aa11.12□□□□□ -0.63
USHBP1-208ENST00000598309 TMEM97Q5BJF2 176 aa11.12□□□□□ -0.63
USHBP1-208ENST00000598309 KCNIP4Q6PIL6 250 aa11.12□□□□□ -0.63
USHBP1-208ENST00000598309 RNASE7Q9H1E1 156 aaKnown RBP11.12□□□□□ -0.63
USHBP1-208ENST00000598309 A0A087WX48 190 aa11.11□□□□□ -0.63
USHBP1-208ENST00000598309 M0QY20 66 aa11.11□□□□□ -0.63
USHBP1-208ENST00000598309 PKIAP61925 76 aa11.11□□□□□ -0.63
USHBP1-208ENST00000598309 ELOBQ15370 118 aa11.11□□□□□ -0.63
USHBP1-208ENST00000598309 FAM231DQ6ZW35 169 aa11.11□□□□□ -0.63
USHBP1-208ENST00000598309 NTN5Q8WTR8 489 aaPredicted RBP11.11□□□□□ -0.63
USHBP1-208ENST00000598309 DNAJC30Q96LL9 226 aa11.11□□□□□ -0.63
USHBP1-208ENST00000598309 FAM210AQ96ND0 272 aa11.11□□□□□ -0.63
USHBP1-208ENST00000598309 EIF5A2Q9GZV4 153 aaKnown RBP11.11□□□□□ -0.63
USHBP1-208ENST00000598309 COX11Q9Y6N1 276 aa11.11□□□□□ -0.63
USHBP1-208ENST00000598309 DNAH5Q8TE73 4624 aa11.11□□□□□ -0.63
USHBP1-208ENST00000598309 NTF3P20783 257 aa11.1□□□□□ -0.63
USHBP1-208ENST00000598309 SUMO4Q6EEV6 95 aa11.1□□□□□ -0.63
USHBP1-208ENST00000598309 RMI2Q96E14 147 aa11.1□□□□□ -0.63
USHBP1-208ENST00000598309 DPH3P1Q9H4G8 78 aa11.1□□□□□ -0.63
USHBP1-208ENST00000598309 HSPG2P98160 4391 aa11.1□□□□□ -0.63
USHBP1-208ENST00000598309 FUSP35637 526 aaKnown RBP eCLIP11.09□□□□□ -0.63
USHBP1-208ENST00000598309 CEBPGP53567 150 aa11.08□□□□□ -0.64
USHBP1-208ENST00000598309 CT83Q5H943 113 aa11.08□□□□□ -0.64
USHBP1-208ENST00000598309 Q8N814 137 aa11.08□□□□□ -0.64
USHBP1-208ENST00000598309 GTSF1Q8WW33 167 aa11.08□□□□□ -0.64
USHBP1-208ENST00000598309 SMIM7Q9BQ49 75 aa11.08□□□□□ -0.64
USHBP1-208ENST00000598309 KLK12Q9UKR0 248 aa11.08□□□□□ -0.64
USHBP1-208ENST00000598309 GATCO43716 136 aaKnown RBP11.07□□□□□ -0.64
USHBP1-208ENST00000598309 TWIST1Q15672 202 aa11.07□□□□□ -0.64
USHBP1-208ENST00000598309 RASL11AQ6T310 242 aa11.07□□□□□ -0.64
USHBP1-208ENST00000598309 MAPKAPK5-AS1Q8N8E1 139 aa11.07□□□□□ -0.64
USHBP1-208ENST00000598309 APOBP04114 4563 aaKnown RBP11.07□□□□□ -0.64
USHBP1-208ENST00000598309 IGLV5-52A0A0A0MRZ9 124 aa11.06□□□□□ -0.64
USHBP1-208ENST00000598309 A8MWL6 223 aa11.06□□□□□ -0.64
USHBP1-208ENST00000598309 TMEM262E9PQX1 116 aa11.06□□□□□ -0.64
USHBP1-208ENST00000598309 SRP19P09132 144 aaKnown RBP11.06□□□□□ -0.64
USHBP1-208ENST00000598309 Q0VG73 95 aa11.06□□□□□ -0.64
USHBP1-208ENST00000598309 ATRAIDQ6UW56 229 aa11.06□□□□□ -0.64
USHBP1-208ENST00000598309 NTM-AS1Q6ZSK4 140 aa11.06□□□□□ -0.64
USHBP1-208ENST00000598309 LINC01551Q86U37 167 aa11.06□□□□□ -0.64
USHBP1-208ENST00000598309 FRZBQ92765 325 aa11.06□□□□□ -0.64
USHBP1-208ENST00000598309 CHCHD5Q9BSY4 110 aa11.06□□□□□ -0.64
USHBP1-208ENST00000598309 TRBV25-1A0A075B6N4 114 aa11.05□□□□□ -0.64
USHBP1-208ENST00000598309 ZNF727A8MUV8 499 aa11.05□□□□□ -0.64
USHBP1-208ENST00000598309 GCSHP23434 173 aa11.05□□□□□ -0.64
USHBP1-208ENST00000598309 KRTAP10-1P60331 282 aa11.05□□□□□ -0.64
USHBP1-208ENST00000598309 IQCJQ1A5X6 159 aa11.05□□□□□ -0.64
USHBP1-208ENST00000598309 MPV17L2Q567V2 206 aa11.05□□□□□ -0.64
USHBP1-208ENST00000598309 UBE2WQ96B02 151 aa11.05□□□□□ -0.64
USHBP1-208ENST00000598309 NIT2Q9NQR4 276 aa11.05□□□□□ -0.64
USHBP1-208ENST00000598309 FOXA3P55318 350 aaPredicted RBP11.04□□□□□ -0.64
USHBP1-208ENST00000598309 SMIM15Q7Z3B0 74 aa11.04□□□□□ -0.64
USHBP1-208ENST00000598309 IGKV2D-24A0A075B6R9 120 aa11.03□□□□□ -0.64
USHBP1-208ENST00000598309 IGHV1-24A0A0C4DH33 117 aa11.03□□□□□ -0.64
USHBP1-208ENST00000598309 CRPP02741 224 aa11.03□□□□□ -0.64
USHBP1-208ENST00000598309 WFDC2Q14508 124 aa11.03□□□□□ -0.64
USHBP1-208ENST00000598309 TEX261Q6UWH6 196 aa11.03□□□□□ -0.64
USHBP1-208ENST00000598309 Q8N1X5 172 aa11.03□□□□□ -0.64
USHBP1-208ENST00000598309 C15orf54Q8N8G6 183 aa11.03□□□□□ -0.64
USHBP1-208ENST00000598309 PGLYRP4Q96LB8 373 aa11.03□□□□□ -0.64
USHBP1-208ENST00000598309 KRTAP17-1Q9BYP8 105 aa11.03□□□□□ -0.64
USHBP1-208ENST00000598309 OSTCQ9NRP0 149 aa11.03□□□□□ -0.64
USHBP1-208ENST00000598309 FAM74A3Q4VXF1 159 aa11.02□□□□□ -0.65
USHBP1-208ENST00000598309 GFRA4Q9GZZ7 299 aa11.02□□□□□ -0.65
USHBP1-208ENST00000598309 FAM231BA6NCW3 169 aa11.01□□□□□ -0.65
USHBP1-208ENST00000598309 ANGP03950 147 aaKnown RBP11.01□□□□□ -0.65
USHBP1-208ENST00000598309 ENHOQ6UWT2 76 aa11.01□□□□□ -0.65
USHBP1-208ENST00000598309 TSKUQ8WUA8 353 aa11.01□□□□□ -0.65
USHBP1-208ENST00000598309 BORCS7Q96B45 105 aa11.01□□□□□ -0.65
USHBP1-208ENST00000598309 C1orf43Q9BWL3 253 aa11.01□□□□□ -0.65
USHBP1-208ENST00000598309 KRTAP4-5Q9BYR2 181 aa11.01□□□□□ -0.65
USHBP1-208ENST00000598309 RBX1P62877 108 aa11□□□□□ -0.65
USHBP1-208ENST00000598309 GAGE6Q13070 117 aa11□□□□□ -0.65
USHBP1-208ENST00000598309 MIAQ16674 131 aa11□□□□□ -0.65
USHBP1-208ENST00000598309 Q8N976 141 aa11□□□□□ -0.65
USHBP1-208ENST00000598309 GATD1Q8NB37 220 aa11□□□□□ -0.65
USHBP1-208ENST00000598309 BAALCQ8WXS3 180 aa11□□□□□ -0.65
USHBP1-208ENST00000598309 TMEM243Q9BU79 118 aa11□□□□□ -0.65
USHBP1-208ENST00000598309 TMEM70Q9BUB7 260 aa11□□□□□ -0.65
USHBP1-208ENST00000598309 SMDT1Q9H4I9 107 aa11□□□□□ -0.65
USHBP1-208ENST00000598309 PRR34Q9NV39 138 aa11□□□□□ -0.65
USHBP1-208ENST00000598309 PCLOQ9Y6V0 5065 aa10.99□□□□□ -0.65
USHBP1-208ENST00000598309 LECT2O14960 151 aa10.99□□□□□ -0.65
USHBP1-208ENST00000598309 XGP55808 180 aa10.99□□□□□ -0.65
USHBP1-208ENST00000598309 TMEM241Q24JQ0 296 aa10.99□□□□□ -0.65
USHBP1-208ENST00000598309 TRAV26-2A0A0B4J265 109 aa10.98□□□□□ -0.65
USHBP1-208ENST00000598309 A0A1B0GUT8 65 aa10.98□□□□□ -0.65
USHBP1-208ENST00000598309 HIGD1CA8MV81 97 aa10.98□□□□□ -0.65
USHBP1-208ENST00000598309 COTL1Q14019 142 aa10.98□□□□□ -0.65
USHBP1-208ENST00000598309 PEA15Q15121 130 aa10.98□□□□□ -0.65
USHBP1-208ENST00000598309 ISOC2Q96AB3 205 aa10.98□□□□□ -0.65
USHBP1-208ENST00000598309 C9JQL5 133 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms