RNA–Protein interactions for RNA: ENST00000597928.5

USHBP1-207, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 3,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-207ENST00000597928 RNASE3P12724 160 aaKnown RBP9.32□□□□□ -0.92
USHBP1-207ENST00000597928 TOMM7Q9P0U1 55 aa9.32□□□□□ -0.92
USHBP1-207ENST00000597928 SAMD13Q5VXD3 122 aa9.32□□□□□ -0.92
USHBP1-207ENST00000597928 INSL3P51460 131 aa9.32□□□□□ -0.92
USHBP1-207ENST00000597928 IGHG2P01859 326 aa9.31□□□□□ -0.92
USHBP1-207ENST00000597928 RPL35AP18077 110 aaKnown RBP9.31□□□□□ -0.92
USHBP1-207ENST00000597928 IGHV1OR15-1A0A075B7D0 117 aa9.31□□□□□ -0.92
USHBP1-207ENST00000597928 TRGV1A0A0A0MS02 117 aa9.31□□□□□ -0.92
USHBP1-207ENST00000597928 TRAV13-1A0A0B4J241 112 aa9.31□□□□□ -0.92
USHBP1-207ENST00000597928 TRAV8-3A0A0A6YYJ7 113 aa9.3□□□□□ -0.92
USHBP1-207ENST00000597928 GPHB5Q86YW7 130 aa9.3□□□□□ -0.92
USHBP1-207ENST00000597928 LGALS1P09382 135 aaKnown RBP9.3□□□□□ -0.92
USHBP1-207ENST00000597928 PMVKQ15126 192 aa9.3□□□□□ -0.92
USHBP1-207ENST00000597928 C11orf68Q9H3H3 251 aaKnown RBP9.3□□□□□ -0.92
USHBP1-207ENST00000597928 ZNF580Q9UK33 172 aa9.3□□□□□ -0.92
USHBP1-207ENST00000597928 TMEM238C9JI98 176 aa9.29□□□□□ -0.92
USHBP1-207ENST00000597928 SPINK8P0C7L1 97 aa9.29□□□□□ -0.92
USHBP1-207ENST00000597928 A6NDX4 124 aa9.28□□□□□ -0.92
USHBP1-207ENST00000597928 AZU1P20160 251 aa9.28□□□□□ -0.92
USHBP1-207ENST00000597928 Q96MF0 132 aa9.28□□□□□ -0.92
USHBP1-207ENST00000597928 KRTAP10-9P60411 292 aa9.28□□□□□ -0.92
USHBP1-207ENST00000597928 SRSF2Q01130 221 aaKnown RBP9.28□□□□□ -0.92
USHBP1-207ENST00000597928 C9JAW5 83 aa9.28□□□□□ -0.92
USHBP1-207ENST00000597928 J3QQQ9 107 aa9.28□□□□□ -0.92
USHBP1-207ENST00000597928 NSUN5P1Q3KNT7 163 aa9.28□□□□□ -0.92
USHBP1-207ENST00000597928 LINC01356Q8N9X3 169 aa9.28□□□□□ -0.92
USHBP1-207ENST00000597928 GCN1Q92616 2671 aaKnown RBP9.28□□□□□ -0.92
USHBP1-207ENST00000597928 VPS13CQ709C8 3753 aa9.28□□□□□ -0.92
USHBP1-207ENST00000597928 MEIG1Q5JSS6 88 aa9.27□□□□□ -0.93
USHBP1-207ENST00000597928 Q9UF83 564 aa9.27□□□□□ -0.93
USHBP1-207ENST00000597928 TOMM6Q96B49 74 aa9.27□□□□□ -0.93
USHBP1-207ENST00000597928 SIGMAR1Q99720 223 aa9.27□□□□□ -0.93
USHBP1-207ENST00000597928 MUC4Q99102 2169 aa9.27□□□□□ -0.93
USHBP1-207ENST00000597928 SIVA1O15304 175 aa9.27□□□□□ -0.93
USHBP1-207ENST00000597928 PPP1R17O96001 155 aa9.27□□□□□ -0.93
USHBP1-207ENST00000597928 RRN3P1Q2M238 152 aa9.27□□□□□ -0.93
USHBP1-207ENST00000597928 C20orf78Q9BR46 151 aa9.26□□□□□ -0.93
USHBP1-207ENST00000597928 FOXI2Q6ZQN5 318 aa9.26□□□□□ -0.93
USHBP1-207ENST00000597928 TMEM61Q8N0U2 210 aa9.26□□□□□ -0.93
USHBP1-207ENST00000597928 USP24Q9UPU5 2620 aa9.26□□□□□ -0.93
USHBP1-207ENST00000597928 MXRA5Q9NR99 2828 aa9.26□□□□□ -0.93
USHBP1-207ENST00000597928 TRGV2A0A075B6R0 118 aa9.25□□□□□ -0.93
USHBP1-207ENST00000597928 STHQ8IWL8 128 aa9.25□□□□□ -0.93
USHBP1-207ENST00000597928 ZFHX3Q15911 3703 aa9.25□□□□□ -0.93
USHBP1-207ENST00000597928 ZNRF2Q8NHG8 242 aa9.25□□□□□ -0.93
USHBP1-207ENST00000597928 IGLV2-18A0A075B6J9 118 aa9.25□□□□□ -0.93
USHBP1-207ENST00000597928 A4D1N5 150 aa9.25□□□□□ -0.93
USHBP1-207ENST00000597928 GAGE12JA6NER3 117 aa9.25□□□□□ -0.93
USHBP1-207ENST00000597928 NDUFS8O00217 210 aa9.25□□□□□ -0.93
USHBP1-207ENST00000597928 GAGE4Q13068 117 aa9.25□□□□□ -0.93
USHBP1-207ENST00000597928 GAGE5Q13069 117 aa9.25□□□□□ -0.93
USHBP1-207ENST00000597928 ZNF575Q86XF7 245 aa9.25□□□□□ -0.93
USHBP1-207ENST00000597928 NEXN-AS1Q8NBZ9 246 aa9.25□□□□□ -0.93
USHBP1-207ENST00000597928 DLX4Q92988 240 aaPredicted RBP9.25□□□□□ -0.93
USHBP1-207ENST00000597928 TRPT1Q86TN4 253 aaKnown RBP9.24□□□□□ -0.93
USHBP1-207ENST00000597928 NIPBLQ6KC79 2804 aaeCLIP9.24□□□□□ -0.93
USHBP1-207ENST00000597928 ERG28Q9UKR5 140 aa9.24□□□□□ -0.93
USHBP1-207ENST00000597928 A0A096LPF7 62 aa9.24□□□□□ -0.93
USHBP1-207ENST00000597928 MRPL53Q96EL3 112 aaKnown RBP9.24□□□□□ -0.93
USHBP1-207ENST00000597928 A0A0J9YX75 114 aa9.23□□□□□ -0.93
USHBP1-207ENST00000597928 GAGE12HA6NDE8 117 aa9.23□□□□□ -0.93
USHBP1-207ENST00000597928 TIMM21Q9BVV7 248 aa9.23□□□□□ -0.93
USHBP1-207ENST00000597928 CNFNQ9BYD5 112 aa9.23□□□□□ -0.93
USHBP1-207ENST00000597928 G3V4G9 280 aa9.23□□□□□ -0.93
USHBP1-207ENST00000597928 MUSTN1Q8IVN3 82 aa9.23□□□□□ -0.93
USHBP1-207ENST00000597928 SPAG8Q99932 426 aaPredicted RBP9.23□□□□□ -0.93
USHBP1-207ENST00000597928 U3KQE9 123 aa9.23□□□□□ -0.93
USHBP1-207ENST00000597928 I3L3M4 83 aa9.22□□□□□ -0.93
USHBP1-207ENST00000597928 YAE1D1Q9NRH1 226 aa9.22□□□□□ -0.93
USHBP1-207ENST00000597928 HELZ2Q9BYK8 2649 aaKnown RBP9.22□□□□□ -0.93
USHBP1-207ENST00000597928 Q6ZSV7 163 aa9.22□□□□□ -0.93
USHBP1-207ENST00000597928 TRGV11A0A075B6L2 103 aa9.22□□□□□ -0.93
USHBP1-207ENST00000597928 TSPEAR-AS2P59090 65 aa9.22□□□□□ -0.93
USHBP1-207ENST00000597928 E9PLD3 99 aa9.21□□□□□ -0.93
USHBP1-207ENST00000597928 TMEM262E9PQX1 116 aa9.21□□□□□ -0.93
USHBP1-207ENST00000597928 DEFB130BP0DP73 79 aa9.21□□□□□ -0.93
USHBP1-207ENST00000597928 DEFB130AP0DP74 79 aa9.21□□□□□ -0.93
USHBP1-207ENST00000597928 DCANP1Q8TF63 244 aa9.21□□□□□ -0.93
USHBP1-207ENST00000597928 LENEPQ9Y5L5 61 aa9.21□□□□□ -0.93
USHBP1-207ENST00000597928 A8MWV9 139 aa9.21□□□□□ -0.94
USHBP1-207ENST00000597928 VPREB3Q9UKI3 123 aa9.21□□□□□ -0.94
USHBP1-207ENST00000597928 GAGE7O76087 117 aa9.2□□□□□ -0.94
USHBP1-207ENST00000597928 GAGE12FP0CL80 117 aa9.2□□□□□ -0.94
USHBP1-207ENST00000597928 GAGE12GP0CL81 117 aa9.2□□□□□ -0.94
USHBP1-207ENST00000597928 GAGE12IP0CL82 117 aa9.2□□□□□ -0.94
USHBP1-207ENST00000597928 SVIPQ8NHG7 77 aa9.2□□□□□ -0.94
USHBP1-207ENST00000597928 WFDC10AQ9H1F0 79 aa9.2□□□□□ -0.94
USHBP1-207ENST00000597928 UBE2L6O14933 153 aa9.2□□□□□ -0.94
USHBP1-207ENST00000597928 UFSP1Q6NVU6 142 aa9.2□□□□□ -0.94
USHBP1-207ENST00000597928 RNASE1P07998 156 aaKnown RBP9.2□□□□□ -0.94
USHBP1-207ENST00000597928 LYRM7Q5U5X0 104 aa9.2□□□□□ -0.94
USHBP1-207ENST00000597928 PRORYQ9H606 182 aa9.2□□□□□ -0.94
USHBP1-207ENST00000597928 NDUFA7O95182 113 aa9.19□□□□□ -0.94
USHBP1-207ENST00000597928 TSPAN13O95857 204 aa9.19□□□□□ -0.94
USHBP1-207ENST00000597928 PAPPA-AS1Q5QFB9 102 aa9.19□□□□□ -0.94
USHBP1-207ENST00000597928 ESM1Q9NQ30 184 aa9.19□□□□□ -0.94
USHBP1-207ENST00000597928 HIGD1BQ9P298 99 aa9.19□□□□□ -0.94
USHBP1-207ENST00000597928 NDUFA12Q9UI09 145 aa9.19□□□□□ -0.94
USHBP1-207ENST00000597928 ATRQ13535 2644 aa9.19□□□□□ -0.94
USHBP1-207ENST00000597928 CLPSL2Q6UWE3 100 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms