RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 DAZAP1Q96EP5 407 aaKnown RBP6.81□□□□□ -1.32
CHMP2A-202ENST00000596708 TCEAL7Q9BRU2 100 aa6.81□□□□□ -1.32
CHMP2A-202ENST00000596708 PKHD1L1Q86WI1 4243 aa6.81□□□□□ -1.32
CHMP2A-202ENST00000596708 TRBV25-1A0A075B6N4 114 aa6.8□□□□□ -1.32
CHMP2A-202ENST00000596708 S100A9P06702 114 aaKnown RBP6.8□□□□□ -1.32
CHMP2A-202ENST00000596708 SMIM17P0DL12 118 aa6.8□□□□□ -1.32
CHMP2A-202ENST00000596708 HNRNPA3P51991 378 aaKnown RBP6.8□□□□□ -1.32
CHMP2A-202ENST00000596708 RBX1P62877 108 aa6.8□□□□□ -1.32
CHMP2A-202ENST00000596708 NTM-AS1Q6ZSK4 140 aa6.8□□□□□ -1.32
CHMP2A-202ENST00000596708 BAGE2Q86Y30 109 aa6.8□□□□□ -1.32
CHMP2A-202ENST00000596708 LINC00269Q8N2A0 174 aa6.8□□□□□ -1.32
CHMP2A-202ENST00000596708 DPH3Q96FX2 82 aa6.8□□□□□ -1.32
CHMP2A-202ENST00000596708 DERL1Q9BUN8 251 aa6.8□□□□□ -1.32
CHMP2A-202ENST00000596708 HMCN2Q8NDA2 5059 aa6.79□□□□□ -1.32
CHMP2A-202ENST00000596708 A0A1B0GV50 99 aa6.79□□□□□ -1.32
CHMP2A-202ENST00000596708 ARPC5O15511 151 aa6.79□□□□□ -1.32
CHMP2A-202ENST00000596708 SNAI2O43623 268 aa6.79□□□□□ -1.32
CHMP2A-202ENST00000596708 CXCL1P09341 107 aa6.79□□□□□ -1.32
CHMP2A-202ENST00000596708 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.79□□□□□ -1.32
CHMP2A-202ENST00000596708 IGLV10-54A0A075B6I4 117 aa6.78□□□□□ -1.32
CHMP2A-202ENST00000596708 SCO2A0A1W2PP80 73 aa6.78□□□□□ -1.32
CHMP2A-202ENST00000596708 PFDN1O60925 122 aa6.78□□□□□ -1.32
CHMP2A-202ENST00000596708 OR5AL1P0C617 328 aa6.78□□□□□ -1.32
CHMP2A-202ENST00000596708 CLRN3Q8NCR9 226 aa6.78□□□□□ -1.32
CHMP2A-202ENST00000596708 SFT2D1Q8WV19 159 aa6.78□□□□□ -1.32
CHMP2A-202ENST00000596708 SSBP4Q9BWG4 385 aaPredicted RBP6.78□□□□□ -1.32
CHMP2A-202ENST00000596708 CYTL1Q9NRR1 136 aa6.78□□□□□ -1.32
CHMP2A-202ENST00000596708 PRR34Q9NV39 138 aa6.78□□□□□ -1.32
CHMP2A-202ENST00000596708 VAX2Q9UIW0 290 aa6.78□□□□□ -1.32
CHMP2A-202ENST00000596708 IGHV1-24A0A0C4DH33 117 aa6.77□□□□□ -1.33
CHMP2A-202ENST00000596708 A0A0D9SG52 128 aa6.77□□□□□ -1.33
CHMP2A-202ENST00000596708 hDV102S1A0JD36 115 aa6.77□□□□□ -1.33
CHMP2A-202ENST00000596708 PANO1I0J062 215 aa6.77□□□□□ -1.33
CHMP2A-202ENST00000596708 MGPP08493 103 aa6.77□□□□□ -1.33
CHMP2A-202ENST00000596708 REG3AQ06141 175 aa6.77□□□□□ -1.33
CHMP2A-202ENST00000596708 KRTAP26-1Q6PEX3 210 aa6.77□□□□□ -1.33
CHMP2A-202ENST00000596708 SDIM1Q6ZPB5 146 aa6.77□□□□□ -1.33
CHMP2A-202ENST00000596708 FAM213BQ8TBF2 198 aa6.77□□□□□ -1.33
CHMP2A-202ENST00000596708 AP1S3Q96PC3 154 aa6.77□□□□□ -1.33
CHMP2A-202ENST00000596708 MLST8Q9BVC4 326 aa6.77□□□□□ -1.33
CHMP2A-202ENST00000596708 UBR4Q5T4S7 5183 aa6.77□□□□□ -1.33
CHMP2A-202ENST00000596708 IQCJQ1A5X6 159 aa6.76□□□□□ -1.33
CHMP2A-202ENST00000596708 AP5S1Q9NUS5 200 aa6.76□□□□□ -1.33
CHMP2A-202ENST00000596708 KIF25-AS1Q9Y6Z4 181 aa6.76□□□□□ -1.33
CHMP2A-202ENST00000596708 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.75□□□□□ -1.33
CHMP2A-202ENST00000596708 H7C1H1 209 aa6.75□□□□□ -1.33
CHMP2A-202ENST00000596708 RAB5CP51148 216 aa6.75□□□□□ -1.33
CHMP2A-202ENST00000596708 Q6ZRU5 148 aa6.75□□□□□ -1.33
CHMP2A-202ENST00000596708 TMUB2Q71RG4 321 aa6.75□□□□□ -1.33
CHMP2A-202ENST00000596708 KCNRGQ8N5I3 272 aa6.75□□□□□ -1.33
CHMP2A-202ENST00000596708 MBD3L1Q8WWY6 194 aa6.75□□□□□ -1.33
CHMP2A-202ENST00000596708 TPPP3Q9BW30 176 aa6.75□□□□□ -1.33
CHMP2A-202ENST00000596708 IGHV3-64A0A075B6Q5 118 aa6.74□□□□□ -1.33
CHMP2A-202ENST00000596708 TRAV8-4A0A0B4J246 113 aa6.74□□□□□ -1.33
CHMP2A-202ENST00000596708 G3V3Q6 166 aa6.74□□□□□ -1.33
CHMP2A-202ENST00000596708 P01737 135 aa6.74□□□□□ -1.33
CHMP2A-202ENST00000596708 GZMBP10144 247 aa6.74□□□□□ -1.33
CHMP2A-202ENST00000596708 NKX2-5P52952 324 aaPredicted RBP6.74□□□□□ -1.33
CHMP2A-202ENST00000596708 C20orf203Q8NBC4 194 aa6.74□□□□□ -1.33
CHMP2A-202ENST00000596708 IGLV4-60A0A075B6I1 120 aa6.73□□□□□ -1.33
CHMP2A-202ENST00000596708 A0A087WYN8 130 aa6.73□□□□□ -1.33
CHMP2A-202ENST00000596708 UMAD1C9J7I0 102 aa6.73□□□□□ -1.33
CHMP2A-202ENST00000596708 SMLR1H3BR10 107 aa6.73□□□□□ -1.33
CHMP2A-202ENST00000596708 M0QY20 66 aa6.73□□□□□ -1.33
CHMP2A-202ENST00000596708 H2AFB1P0C5Y9 115 aa6.73□□□□□ -1.33
CHMP2A-202ENST00000596708 MT1HL1P0DM35 61 aa6.73□□□□□ -1.33
CHMP2A-202ENST00000596708 RPL35P42766 123 aaKnown RBP6.73□□□□□ -1.33
CHMP2A-202ENST00000596708 CNBPP62633 177 aaKnown RBP6.73□□□□□ -1.33
CHMP2A-202ENST00000596708 SUMO4Q6EEV6 95 aa6.73□□□□□ -1.33
CHMP2A-202ENST00000596708 FER1L6-AS1Q8NA97 138 aa6.73□□□□□ -1.33
CHMP2A-202ENST00000596708 TMEM243Q9BU79 118 aa6.73□□□□□ -1.33
CHMP2A-202ENST00000596708 DPH3P1Q9H4G8 78 aa6.73□□□□□ -1.33
CHMP2A-202ENST00000596708 A0A1B0GUV1 79 aa6.72□□□□□ -1.33
CHMP2A-202ENST00000596708 UBE2L6O14933 153 aa6.72□□□□□ -1.33
CHMP2A-202ENST00000596708 CHTF8P0CG12 524 aa6.72□□□□□ -1.33
CHMP2A-202ENST00000596708 RPS20P60866 119 aaKnown RBP6.72□□□□□ -1.33
CHMP2A-202ENST00000596708 CACNG7P62955 275 aa6.72□□□□□ -1.33
CHMP2A-202ENST00000596708 CIRBPQ14011 172 aaKnown RBP6.72□□□□□ -1.33
CHMP2A-202ENST00000596708 WDR73Q6P4I2 378 aa6.72□□□□□ -1.33
CHMP2A-202ENST00000596708 RASL11AQ6T310 242 aa6.72□□□□□ -1.33
CHMP2A-202ENST00000596708 OR2D3Q8NGH3 330 aa6.72□□□□□ -1.33
CHMP2A-202ENST00000596708 GFRA4Q9GZZ7 299 aa6.72□□□□□ -1.33
CHMP2A-202ENST00000596708 BATF3Q9NR55 127 aa6.72□□□□□ -1.33
CHMP2A-202ENST00000596708 IGKV3OR2-268A0A0C4DH90 116 aa6.71□□□□□ -1.34
CHMP2A-202ENST00000596708 SLPIP03973 132 aa6.71□□□□□ -1.34
CHMP2A-202ENST00000596708 IGLC6P0CF74 106 aa6.71□□□□□ -1.34
CHMP2A-202ENST00000596708 SULT1A2P50226 295 aa6.71□□□□□ -1.34
CHMP2A-202ENST00000596708 RNF185Q96GF1 192 aa6.71□□□□□ -1.34
CHMP2A-202ENST00000596708 KANTRA0A1W2PQU2 76 aa6.7□□□□□ -1.34
CHMP2A-202ENST00000596708 TRGC1P0CF51 173 aa6.7□□□□□ -1.34
CHMP2A-202ENST00000596708 COTL1Q14019 142 aa6.7□□□□□ -1.34
CHMP2A-202ENST00000596708 ZNF345Q14585 488 aa6.7□□□□□ -1.34
CHMP2A-202ENST00000596708 CENPWQ5EE01 88 aa6.7□□□□□ -1.34
CHMP2A-202ENST00000596708 CFAP161Q6P656 301 aa6.7□□□□□ -1.34
CHMP2A-202ENST00000596708 SPACA4Q8TDM5 124 aa6.7□□□□□ -1.34
CHMP2A-202ENST00000596708 C7orf33Q8WU49 177 aa6.7□□□□□ -1.34
CHMP2A-202ENST00000596708 NIT2Q9NQR4 276 aa6.7□□□□□ -1.34
CHMP2A-202ENST00000596708 GNG13Q9P2W3 67 aa6.7□□□□□ -1.34
CHMP2A-202ENST00000596708 XKRY2A2RUG3 117 aa6.69□□□□□ -1.34
CHMP2A-202ENST00000596708 GAGE12HA6NDE8 117 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms