RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 LINC00694P0DN24 101 aa7.55□□□□□ -1.2
LIG1-211ENST00000596457 FOXA3P55318 350 aaPredicted RBP7.55□□□□□ -1.2
LIG1-211ENST00000596457 TIRAPP58753 221 aa7.55□□□□□ -1.2
LIG1-211ENST00000596457 LINC00315P59091 139 aa7.55□□□□□ -1.2
LIG1-211ENST00000596457 CT83Q5H943 113 aa7.55□□□□□ -1.2
LIG1-211ENST00000596457 SUMO4Q6EEV6 95 aa7.55□□□□□ -1.2
LIG1-211ENST00000596457 TNFRSF18Q9Y5U5 241 aa7.55□□□□□ -1.2
LIG1-211ENST00000596457 H7C1H1 209 aa7.54□□□□□ -1.2
LIG1-211ENST00000596457 UBE2D3P61077 147 aa7.54□□□□□ -1.2
LIG1-211ENST00000596457 UBE2D2P62837 147 aa7.54□□□□□ -1.2
LIG1-211ENST00000596457 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.54□□□□□ -1.2
LIG1-211ENST00000596457 A0A1B0GUT8 65 aa7.53□□□□□ -1.2
LIG1-211ENST00000596457 GFRA4Q9GZZ7 299 aa7.53□□□□□ -1.2
LIG1-211ENST00000596457 A0A087WWC5 75 aa7.52□□□□□ -1.21
LIG1-211ENST00000596457 TRAV26-2A0A0B4J265 109 aa7.52□□□□□ -1.21
LIG1-211ENST00000596457 M0QY20 66 aa7.52□□□□□ -1.21
LIG1-211ENST00000596457 DNAH10OSP0CZ25 163 aa7.52□□□□□ -1.21
LIG1-211ENST00000596457 RASL11AQ6T310 242 aa7.52□□□□□ -1.21
LIG1-211ENST00000596457 Q8N3U1 123 aa7.52□□□□□ -1.21
LIG1-211ENST00000596457 NUP35Q8NFH5 326 aa7.52□□□□□ -1.21
LIG1-211ENST00000596457 DEFB104AQ8WTQ1 72 aa7.52□□□□□ -1.21
LIG1-211ENST00000596457 CNFNQ9BYD5 112 aa7.52□□□□□ -1.21
LIG1-211ENST00000596457 FAM231BA6NCW3 169 aa7.51□□□□□ -1.21
LIG1-211ENST00000596457 TMEM262E9PQX1 116 aa7.51□□□□□ -1.21
LIG1-211ENST00000596457 TNP2Q05952 138 aa7.51□□□□□ -1.21
LIG1-211ENST00000596457 RIGQ13278 110 aa7.51□□□□□ -1.21
LIG1-211ENST00000596457 COMMD7Q86VX2 200 aa7.51□□□□□ -1.21
LIG1-211ENST00000596457 DNAJC30Q96LL9 226 aa7.51□□□□□ -1.21
LIG1-211ENST00000596457 NAT8BQ9UHF3 227 aa7.51□□□□□ -1.21
LIG1-211ENST00000596457 URGCP-MRPS24S4R325 110 aa7.51□□□□□ -1.21
LIG1-211ENST00000596457 HERC1Q15751 4861 aa7.5□□□□□ -1.21
LIG1-211ENST00000596457 F8W036 122 aa7.5□□□□□ -1.21
LIG1-211ENST00000596457 LINC01556Q5JQF7 62 aa7.5□□□□□ -1.21
LIG1-211ENST00000596457 KCNIP4Q6PIL6 250 aa7.5□□□□□ -1.21
LIG1-211ENST00000596457 C10orf126Q8N4M7 172 aa7.5□□□□□ -1.21
LIG1-211ENST00000596457 GATD1Q8NB37 220 aa7.5□□□□□ -1.21
LIG1-211ENST00000596457 RPL39LQ96EH5 51 aaKnown RBP7.5□□□□□ -1.21
LIG1-211ENST00000596457 Q9HAA7 133 aa7.5□□□□□ -1.21
LIG1-211ENST00000596457 NIT2Q9NQR4 276 aa7.5□□□□□ -1.21
LIG1-211ENST00000596457 DNAH10Q8IVF4 4471 aa7.49□□□□□ -1.21
LIG1-211ENST00000596457 TRBV6-8A0A0A6YYG3 113 aa7.49□□□□□ -1.21
LIG1-211ENST00000596457 A0A1B0GVY2 172 aa7.49□□□□□ -1.21
LIG1-211ENST00000596457 SMIM27A0A1W2PRY6 76 aa7.49□□□□□ -1.21
LIG1-211ENST00000596457 MRPL54Q6P161 138 aaKnown RBP7.49□□□□□ -1.21
LIG1-211ENST00000596457 DAZ4Q86SG3 579 aaKnown RBP7.49□□□□□ -1.21
LIG1-211ENST00000596457 CHCHD5Q9BSY4 110 aa7.49□□□□□ -1.21
LIG1-211ENST00000596457 DAZ3Q9NR90 486 aaKnown RBP7.49□□□□□ -1.21
LIG1-211ENST00000596457 A0A087WX48 190 aa7.48□□□□□ -1.21
LIG1-211ENST00000596457 PPP1R2P9O14990 202 aa7.48□□□□□ -1.21
LIG1-211ENST00000596457 CAMPP49913 170 aa7.48□□□□□ -1.21
LIG1-211ENST00000596457 PNRC1Q12796 327 aaPredicted RBP7.48□□□□□ -1.21
LIG1-211ENST00000596457 TMEM97Q5BJF2 176 aa7.48□□□□□ -1.21
LIG1-211ENST00000596457 UQCC3Q6UW78 93 aa7.48□□□□□ -1.21
LIG1-211ENST00000596457 NFE4Q86UQ8 179 aa7.48□□□□□ -1.21
LIG1-211ENST00000596457 NIT1Q86X76 327 aa7.48□□□□□ -1.21
LIG1-211ENST00000596457 AMN1Q8IY45 258 aa7.48□□□□□ -1.21
LIG1-211ENST00000596457 KRTAP4-5Q9BYR2 181 aa7.48□□□□□ -1.21
LIG1-211ENST00000596457 TMEM191AQ9H0A3 160 aa7.48□□□□□ -1.21
LIG1-211ENST00000596457 TRBV25-1A0A075B6N4 114 aa7.47□□□□□ -1.21
LIG1-211ENST00000596457 TMEM218A2RU14 115 aa7.47□□□□□ -1.21
LIG1-211ENST00000596457 IBA57-AS1B1ANH7 110 aa7.47□□□□□ -1.21
LIG1-211ENST00000596457 K7EP13 123 aa7.47□□□□□ -1.21
LIG1-211ENST00000596457 PSCAO43653 123 aa7.47□□□□□ -1.21
LIG1-211ENST00000596457 MT-ND4LP03901 98 aa7.47□□□□□ -1.21
LIG1-211ENST00000596457 BTF3P20290 206 aaKnown RBP7.47□□□□□ -1.21
LIG1-211ENST00000596457 RAB4AP20338 218 aa7.47□□□□□ -1.21
LIG1-211ENST00000596457 GAGE6Q13070 117 aa7.47□□□□□ -1.21
LIG1-211ENST00000596457 NTM-AS1Q6ZSK4 140 aa7.47□□□□□ -1.21
LIG1-211ENST00000596457 RNF185Q96GF1 192 aa7.47□□□□□ -1.21
LIG1-211ENST00000596457 KLK12Q9UKR0 248 aa7.47□□□□□ -1.21
LIG1-211ENST00000596457 IGHV1-24A0A0C4DH33 117 aa7.46□□□□□ -1.22
LIG1-211ENST00000596457 SMKR1H3BMG3 65 aa7.46□□□□□ -1.22
LIG1-211ENST00000596457 GAS8-AS1O95177 125 aa7.46□□□□□ -1.22
LIG1-211ENST00000596457 NCR2O95944 276 aa7.46□□□□□ -1.22
LIG1-211ENST00000596457 ADCYAP1P18509 176 aa7.46□□□□□ -1.22
LIG1-211ENST00000596457 ANAPC16Q96DE5 110 aa7.46□□□□□ -1.22
LIG1-211ENST00000596457 PMCHP20382 165 aa7.45□□□□□ -1.22
LIG1-211ENST00000596457 COTL1Q14019 142 aa7.45□□□□□ -1.22
LIG1-211ENST00000596457 ATRAIDQ6UW56 229 aa7.45□□□□□ -1.22
LIG1-211ENST00000596457 Q6ZRN7 208 aaPredicted RBP7.45□□□□□ -1.22
LIG1-211ENST00000596457 A0A1B0GW15 77 aa7.44□□□□□ -1.22
LIG1-211ENST00000596457 LINC00862A6NCI5 91 aa7.44□□□□□ -1.22
LIG1-211ENST00000596457 SDHAF1A6NFY7 115 aa7.44□□□□□ -1.22
LIG1-211ENST00000596457 UBE2L6O14933 153 aa7.44□□□□□ -1.22
LIG1-211ENST00000596457 EREGO14944 169 aa7.44□□□□□ -1.22
LIG1-211ENST00000596457 ANGP03950 147 aaKnown RBP7.44□□□□□ -1.22
LIG1-211ENST00000596457 AMTP48728 403 aa7.44□□□□□ -1.22
LIG1-211ENST00000596457 HBBP68871 147 aa7.44□□□□□ -1.22
LIG1-211ENST00000596457 ELOBQ15370 118 aa7.44□□□□□ -1.22
LIG1-211ENST00000596457 MRPL51Q4U2R6 128 aaKnown RBP7.44□□□□□ -1.22
LIG1-211ENST00000596457 MPV17L2Q567V2 206 aa7.44□□□□□ -1.22
LIG1-211ENST00000596457 FRZBQ92765 325 aa7.44□□□□□ -1.22
LIG1-211ENST00000596457 UBE2WQ96B02 151 aa7.44□□□□□ -1.22
LIG1-211ENST00000596457 MRAP2Q96G30 205 aa7.44□□□□□ -1.22
LIG1-211ENST00000596457 TMEM243Q9BU79 118 aa7.44□□□□□ -1.22
LIG1-211ENST00000596457 ST20Q9HBF5 79 aa7.44□□□□□ -1.22
LIG1-211ENST00000596457 DNAH17Q9UFH2 4485 aa7.43□□□□□ -1.22
LIG1-211ENST00000596457 TRAV8-3A0A0A6YYJ7 113 aa7.43□□□□□ -1.22
LIG1-211ENST00000596457 S100A8P05109 93 aa7.43□□□□□ -1.22
LIG1-211ENST00000596457 RPS10P46783 165 aaKnown RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms