RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 DPH3P1Q9H4G8 78 aa12.4□□□□□ -0.42
ZNF558-204ENST00000596172 C10orf126Q8N4M7 172 aa12.39□□□□□ -0.43
ZNF558-204ENST00000596172 V9GYV3 84 aa12.39□□□□□ -0.43
ZNF558-204ENST00000596172 H7C1H1 209 aa12.38□□□□□ -0.43
ZNF558-204ENST00000596172 M0QY20 66 aa12.38□□□□□ -0.43
ZNF558-204ENST00000596172 ADIRFQ15847 76 aa12.38□□□□□ -0.43
ZNF558-204ENST00000596172 A0A1B0GVY2 172 aa12.37□□□□□ -0.43
ZNF558-204ENST00000596172 PGLYRP4Q96LB8 373 aa12.37□□□□□ -0.43
ZNF558-204ENST00000596172 DNAJC30Q96LL9 226 aa12.37□□□□□ -0.43
ZNF558-204ENST00000596172 PKD1P98161 4303 aa12.36□□□□□ -0.43
ZNF558-204ENST00000596172 HIGD1CA8MV81 97 aa12.36□□□□□ -0.43
ZNF558-204ENST00000596172 MGPP08493 103 aa12.36□□□□□ -0.43
ZNF558-204ENST00000596172 SUMO4Q6EEV6 95 aa12.36□□□□□ -0.43
ZNF558-204ENST00000596172 SMIM15Q7Z3B0 74 aa12.35□□□□□ -0.43
ZNF558-204ENST00000596172 DAZ4Q86SG3 579 aaKnown RBP12.35□□□□□ -0.43
ZNF558-204ENST00000596172 NFE4Q86UQ8 179 aa12.35□□□□□ -0.43
ZNF558-204ENST00000596172 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.35□□□□□ -0.43
ZNF558-204ENST00000596172 BORCS7Q96B45 105 aa12.35□□□□□ -0.43
ZNF558-204ENST00000596172 DAZ3Q9NR90 486 aaKnown RBP12.35□□□□□ -0.43
ZNF558-204ENST00000596172 A0A1B0GUT8 65 aa12.34□□□□□ -0.43
ZNF558-204ENST00000596172 RASL11AQ6T310 242 aa12.34□□□□□ -0.43
ZNF558-204ENST00000596172 Q6ZRN7 208 aaPredicted RBP12.34□□□□□ -0.43
ZNF558-204ENST00000596172 FRZBQ92765 325 aa12.34□□□□□ -0.43
ZNF558-204ENST00000596172 TNFRSF18Q9Y5U5 241 aa12.34□□□□□ -0.43
ZNF558-204ENST00000596172 DNAH11Q96DT5 4516 aa12.33□□□□□ -0.44
ZNF558-204ENST00000596172 IBA57-AS1B1ANH7 110 aa12.33□□□□□ -0.44
ZNF558-204ENST00000596172 TNP2Q05952 138 aa12.33□□□□□ -0.44
ZNF558-204ENST00000596172 TMEM97Q5BJF2 176 aa12.33□□□□□ -0.44
ZNF558-204ENST00000596172 TRBV6-8A0A0A6YYG3 113 aa12.32□□□□□ -0.44
ZNF558-204ENST00000596172 NUP35Q8NFH5 326 aa12.32□□□□□ -0.44
ZNF558-204ENST00000596172 NIT2Q9NQR4 276 aa12.32□□□□□ -0.44
ZNF558-204ENST00000596172 NAT8BQ9UHF3 227 aa12.32□□□□□ -0.44
ZNF558-204ENST00000596172 SMIM27A0A1W2PRY6 76 aa12.31□□□□□ -0.44
ZNF558-204ENST00000596172 NIT1Q86X76 327 aa12.31□□□□□ -0.44
ZNF558-204ENST00000596172 CHCHD7Q9BUK0 85 aa12.31□□□□□ -0.44
ZNF558-204ENST00000596172 IGHV3-30P01768 117 aa12.3□□□□□ -0.44
ZNF558-204ENST00000596172 IGHV3-33P01772 117 aa12.3□□□□□ -0.44
ZNF558-204ENST00000596172 IGHV3-30-3P0DP02 117 aa12.3□□□□□ -0.44
ZNF558-204ENST00000596172 IGHV3-30-5P0DP03 117 aa12.3□□□□□ -0.44
ZNF558-204ENST00000596172 PNRC1Q12796 327 aaPredicted RBP12.3□□□□□ -0.44
ZNF558-204ENST00000596172 RIGQ13278 110 aa12.3□□□□□ -0.44
ZNF558-204ENST00000596172 LAGE3Q14657 143 aa12.3□□□□□ -0.44
ZNF558-204ENST00000596172 UQCC3Q6UW78 93 aa12.3□□□□□ -0.44
ZNF558-204ENST00000596172 GATD1Q8NB37 220 aa12.3□□□□□ -0.44
ZNF558-204ENST00000596172 TMEM191AQ9H0A3 160 aa12.3□□□□□ -0.44
ZNF558-204ENST00000596172 NTM-AS1Q6ZSK4 140 aa12.28□□□□□ -0.44
ZNF558-204ENST00000596172 URGCP-MRPS24S4R325 110 aa12.28□□□□□ -0.44
ZNF558-204ENST00000596172 DYNC1H1Q14204 4646 aaKnown RBP12.28□□□□□ -0.44
ZNF558-204ENST00000596172 PKHD1P08F94 4074 aa12.28□□□□□ -0.44
ZNF558-204ENST00000596172 PPP1R2P9O14990 202 aa12.27□□□□□ -0.45
ZNF558-204ENST00000596172 PKIAP61925 76 aa12.27□□□□□ -0.45
ZNF558-204ENST00000596172 TRAV26-2A0A0B4J265 109 aa12.26□□□□□ -0.45
ZNF558-204ENST00000596172 A0A1B0GW15 77 aa12.26□□□□□ -0.45
ZNF558-204ENST00000596172 IQCJQ1A5X6 159 aa12.26□□□□□ -0.45
ZNF558-204ENST00000596172 KCNIP4Q6PIL6 250 aa12.26□□□□□ -0.45
ZNF558-204ENST00000596172 Q8N3U1 123 aa12.26□□□□□ -0.45
ZNF558-204ENST00000596172 A0A087WX48 190 aa12.25□□□□□ -0.45
ZNF558-204ENST00000596172 ELOBQ15370 118 aa12.25□□□□□ -0.45
ZNF558-204ENST00000596172 TRBV25-1A0A075B6N4 114 aa12.24□□□□□ -0.45
ZNF558-204ENST00000596172 TRAV8-3A0A0A6YYJ7 113 aa12.24□□□□□ -0.45
ZNF558-204ENST00000596172 TMEM218A2RU14 115 aa12.24□□□□□ -0.45
ZNF558-204ENST00000596172 RAB4AP20338 218 aa12.24□□□□□ -0.45
ZNF558-204ENST00000596172 RNF185Q96GF1 192 aa12.24□□□□□ -0.45
ZNF558-204ENST00000596172 IGHV1-24A0A0C4DH33 117 aa12.23□□□□□ -0.45
ZNF558-204ENST00000596172 TRBV6-5A0A0K0K1A5 114 aa12.23□□□□□ -0.45
ZNF558-204ENST00000596172 TMEM262E9PQX1 116 aa12.23□□□□□ -0.45
ZNF558-204ENST00000596172 MT-ND4LP03901 98 aa12.23□□□□□ -0.45
ZNF558-204ENST00000596172 ANAPC16Q96DE5 110 aa12.23□□□□□ -0.45
ZNF558-204ENST00000596172 MRAP2Q96G30 205 aa12.23□□□□□ -0.45
ZNF558-204ENST00000596172 CHCHD5Q9BSY4 110 aa12.23□□□□□ -0.45
ZNF558-204ENST00000596172 RPL39LQ96EH5 51 aaKnown RBP12.22□□□□□ -0.45
ZNF558-204ENST00000596172 LINC00862A6NCI5 91 aa12.21□□□□□ -0.45
ZNF558-204ENST00000596172 S100A8P05109 93 aa12.21□□□□□ -0.45
ZNF558-204ENST00000596172 COTL1Q14019 142 aa12.21□□□□□ -0.45
ZNF558-204ENST00000596172 AMN1Q8IY45 258 aa12.21□□□□□ -0.45
ZNF558-204ENST00000596172 TM2D2Q9BX73 214 aa12.21□□□□□ -0.45
ZNF558-204ENST00000596172 Q9HAA7 133 aa12.21□□□□□ -0.45
ZNF558-204ENST00000596172 FAM104BQ5XKR9 115 aa12.2□□□□□ -0.46
ZNF558-204ENST00000596172 KLK12Q9UKR0 248 aa12.2□□□□□ -0.46
ZNF558-204ENST00000596172 A0A087WTM6 91 aa12.19□□□□□ -0.46
ZNF558-204ENST00000596172 A0A1B0GXF2 115 aa12.19□□□□□ -0.46
ZNF558-204ENST00000596172 SDHAF1A6NFY7 115 aa12.19□□□□□ -0.46
ZNF558-204ENST00000596172 F8W036 122 aa12.19□□□□□ -0.46
ZNF558-204ENST00000596172 EREGO14944 169 aa12.19□□□□□ -0.46
ZNF558-204ENST00000596172 NCR2O95944 276 aa12.19□□□□□ -0.46
ZNF558-204ENST00000596172 PPP1R17O96001 155 aa12.19□□□□□ -0.46
ZNF558-204ENST00000596172 ADCYAP1P18509 176 aa12.19□□□□□ -0.46
ZNF558-204ENST00000596172 HBBP68871 147 aa12.19□□□□□ -0.46
ZNF558-204ENST00000596172 MPV17L2Q567V2 206 aa12.19□□□□□ -0.46
ZNF558-204ENST00000596172 ATRAIDQ6UW56 229 aa12.19□□□□□ -0.46
ZNF558-204ENST00000596172 ATP5L2Q7Z4Y8 100 aa12.19□□□□□ -0.46
ZNF558-204ENST00000596172 COMMD7Q86VX2 200 aa12.19□□□□□ -0.46
ZNF558-204ENST00000596172 TMEM243Q9BU79 118 aa12.19□□□□□ -0.46
ZNF558-204ENST00000596172 SEC11CQ9BY50 192 aa12.19□□□□□ -0.46
ZNF558-204ENST00000596172 COX11Q9Y6N1 276 aa12.19□□□□□ -0.46
ZNF558-204ENST00000596172 PSCAO43653 123 aa12.18□□□□□ -0.46
ZNF558-204ENST00000596172 GAS8-AS1O95177 125 aa12.18□□□□□ -0.46
ZNF558-204ENST00000596172 CAMPP49913 170 aa12.18□□□□□ -0.46
ZNF558-204ENST00000596172 Q0VG73 95 aa12.18□□□□□ -0.46
ZNF558-204ENST00000596172 RMI2Q96E14 147 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms